Zobrazeno 1 - 8
of 8
pro vyhledávání: '"Pieter Lukasse"'
Autor:
Ino de Bruijn, Xiang Li, Selcuk Onur Sumer, Benjamin Gross, Robert Sheridan, Angelica Ochoa, Manda Wilson, Avery Wang, Hongxin Zhang, Aaron Lisman, Adam Abeshouse, Emily Zhang, Alice Thum, Ananthan Sadagopan, Zachary Heins, Cyriac Kandoth, Sander Rodenburg, Sander Tan, Pieter Lukasse, Sjoerd van Hagen, Remond J. A. Fijneman, Gerrit A. Meijer, Nikolaus Schultz, Jianjiong Gao
Publikováno v:
JCO Clin Cancer Inform
PURPOSE Interpretation of genomic variants in tumor samples still presents a challenge in research and the clinical setting. A major issue is that information for variant interpretation is fragmented across disparate databases, and aggregation of inf
Autor:
Jianjiong Gao, Tali Mazor, Ino de Bruijn, Adam Abeshouse, Diana Baiceanu, Ziya Erkoc, Benjamin Gross, David Higgins, Prasanna K. Jagannathan, Karthik Kalletla, Priti Kumari, Ritika Kundra, Xiang Li, James Lindsay, Aaron Lisman, Pieter Lukasse, Divya Madala, Ramyasree Madupuri, Angelica Ochoa, Oleguer Plantalech, Joyce Quach, Sander Rodenburg, Anusha Satravada, Fedde Schaeffer, Robert Sheridan, Lucas Sikina, S. Onur Sumer, Yichao Sun, Paul van Dijk, Pim van Nierop, Avery Wang, Manda Wilson, Hongxin Zhang, Gaofei Zhao, Sjoerd van Hagen, Kees van Bochove, Ugur Dogrusoz, Allison Heath, Adam Resnick, Trevor J. Pugh, Chris Sander, Ethan Cerami, Nikolaus Schultz
Publikováno v:
Cancer Research
The cBioPortal for Cancer Genomics is an open-source software platform that enables interactive, exploratory analysis of large-scale cancer genomics data sets with a user-friendly interface. It integrates genomic and clinical data, and provides a sui
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c889071fdf7adc9d00b7cab84d9e2335
https://hdl.handle.net/11693/77721
https://hdl.handle.net/11693/77721
Autor:
James Lindsay, Lucas Sikina, Sjoerd van Hagen, Allison Heath, Diana Baiceanu, Angelica Ochoa, Manda Wilson, Tali Mazor, Nikolaus Schultz, Ramyasree Madupuri, Prasanna K. Jagannathan, Aaron Lisman, Ziya Erkoc, Yichao Sun, David Higgins, Ritika Kundra, Sander Y.A. Rodenburg, Fedde Schaeffer, Gaofei Zhao, Ethan Cerami, Robert L. Sheridan, Ino de Bruijn, Kees van Bochove, S. Onur Sumer, Paul van Dijk, Benjamin Gross, Adam Abeshouse, Pim van Nierop, Avery Wang, Jianjiong Gao, Karthik Kalletla, Priti Kumari, Joyce Quach, Pieter Lukasse, Ugur Dogrusoz, Divya Madala, Adam C. Resnick, Oleguer Plantalech, Anusha Satravada, Xiang Li, Hongxin Zhang, Trevor J. Pugh, Chris Sander
Publikováno v:
Cancer Research. 80:3209-3209
The cBioPortal for Cancer Genomics is an open-source software platform that enables interactive, exploratory analysis of large-scale cancer genomics data sets with a biologist-friendly interface. It integrates genomic and clinical data, and provides
Autor:
Antoine H. P. America, Pieter Lukasse
Publikováno v:
Journal of Proteome Research, 13, 3191-3199
Journal of Proteome Research 13 (2014)
Journal of Proteome Research 13 (2014)
Determining the list of proteins present in a sample, based on the list of identified peptides, is a crucial step in the untargeted proteomics LC-MS/MS data-processing pipeline. This step, commonly referred to as protein inference, turns out to be a
Autor:
Jianjiong Gao, Tali Mazor, Adam Abeshouse, Ersin Ciftci, Ino de Bruijn, Benjamin Gross, Karthik Kalletla, Priti Kumari, Ritika Kundra, James Lindsay, Aaron Lisman, Pieter Lukasse, Ramyasree Madupuri, Angelica Ochoa, Oleguer Plantalech, Pichai Raman, Fedde Schaeffer, Robert Sheridan, Jing Su, S. Onur Sumer, Yichao Sun, Sander Tan, Sjoerd van Hagen, Avery Wang, Manda Wilson, Hongxin Zhang, Gaofei Zhao, Kelsey Zhu, Kees van Bochove, Ugur Dogrusoz, Trevor J. Pugh, Adam Resnick, Chris Sander, Ethan Cerami, Nikolaus Schultz
Publikováno v:
Cancer Research. 79:910-910
The cBioPortal for Cancer Genomics is an open-source software platform that enables interactive, exploratory analysis of large-scale cancer genomics data sets with a biologist-friendly interface. It integrates genomic and clinical data, and provides
Autor:
Ritesh Krishna, Florian Reisinger, Juan Antonio Vizcaíno, Salvador Martínez-Bartolomé, Andrew R. Jones, Fawaz Ghali, Pieter Lukasse, Henning Hermjakob
Publikováno v:
Molecular & Cellular Proteomics
Molecular & Cellular Proteomics; Vol 12
Molecular & Cellular Proteomics : MCP
Molecular & Cellular Proteomics; Vol 12
Molecular & Cellular Proteomics : MCP
The Proteomics Standards Initiative has recently released the mzIdentML data standard for representing peptide and protein identification results, for example, created by a search engine. When a new standard format is produced, it is important that s
Autor:
Pratik D. Jagtap, Peter Horvatovich, Perry D. Moerland, Pieter Lukasse, Ira Cooke, Janne Lehtiö, John Chilton, Timothy J. Griffin, Jorrit Boekel, Lukas Käll
Publikováno v:
Nature Biotechnology, 33(2), 137-139. Nature Publishing Group
Nature biotechnology, 33(2), 137-139. Nature Publishing Group
Nature Biotechnology, 33(2), 137-139
Nature Biotechnology 33 (2015) 2
Nature biotechnology, 33(2), 137-139. Nature Publishing Group
Nature Biotechnology, 33(2), 137-139
Nature Biotechnology 33 (2015) 2
[Extract] Comprehensive multi-omic data acquisition has become a reality, largely driven by the availability of high-throughput sequencing technologies for genomes and transcriptomes1, and high-resolution mass spectrometry (MS)2,3 for the in-depth ch
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::325dc9c28a13669d4d7d02722d0c8757
https://research.rug.nl/en/publications/446bb2f2-116e-483b-83cb-b40d708ed0b1
https://research.rug.nl/en/publications/446bb2f2-116e-483b-83cb-b40d708ed0b1
Autor:
James Lindsay, Hongxin Zhang, Dong Li, Zachary J. Heins, Ethan Cerami, Trevor J. Pugh, Yichao Sun, Jianjiong Gao, Sander de Ridder, Stuart Watt, Chris Sander, Onur Sumer, Pieter Lukasse, Benjamin Gross, Adam Abeshouse, Istemi Bahceci, Jiaojiao Wang, Ritika Kundra, Ino de Bruijn, Qingguo Wang, Hsiao-Wei Chen, M. Furkan Sahin, Fedde Schaeffer, Jorge S. Reis-Filho, Ugur Dogrusoz, Priti Kumari, Nikolaus Schultz, Kees van Bochove
Publikováno v:
Cancer Research. 76:5277-5277
The cBioPortal for Cancer Genomics provides intuitive visualization and analysis of complex cancer genomics data. The public site (http://cbioportal.org/) is accessed by more than 1,500 researchers per day, and there are now dozens of local instances