Zobrazeno 1 - 10
of 49
pro vyhledávání: '"Pieter Audenaert"'
Publikováno v:
BMC Bioinformatics, Vol 21, Iss 1, Pp 1-18 (2020)
Abstract Background De Bruijn graphs are key data structures for the analysis of next-generation sequencing data. They efficiently represent the overlap between reads and hence, also the underlying genome sequence. However, sequencing errors and repe
Externí odkaz:
https://doaj.org/article/e161feb46e364215bd1f977e499798f7
Publikováno v:
PLoS ONE, Vol 17, Iss 6, p e0270147 (2022)
Many real-life problems boil down to a variant of the Minimum Steiner Tree Problem (STP). In telecommunications, Fiber-To-The-Home (FTTH) houses are clustered so they can be connected with fiber as cost-efficiently as possible. The cost calculation o
Externí odkaz:
https://doaj.org/article/b8ce87db79544980844bbb234e6700b2
Publikováno v:
Journal of Shipping and Trade, Vol 4, Iss 1, Pp 1-24 (2019)
Abstract The seaport-hinterland access infrastructures become more saturated leading to extra unpredictable costs for logistics operators. To keep their services competitive, infrastructure managers (such as port authorities) seek new approaches in m
Externí odkaz:
https://doaj.org/article/b8480c9b2a924050aaebb42a1699742d
Autor:
Ine Melckenbeeck, Pieter Audenaert, Thomas Van Parys, Yves Van De Peer, Didier Colle, Mario Pickavet
Publikováno v:
BMC Bioinformatics, Vol 20, Iss 1, Pp 1-13 (2019)
Abstract Background Graphlets are useful for bioinformatics network analysis. Based on the structure of Hočevar and Demšar’s ORCA algorithm, we have created an orbit counting algorithm, named Jesse. This algorithm, like ORCA, uses equations to co
Externí odkaz:
https://doaj.org/article/eded57b169ca4932ae424a4aee623470
Publikováno v:
Frontiers in Genetics, Vol 10 (2019)
Studying the impact of genetic variation on gene regulatory networks is essential to understand the biological mechanisms by which genetic variation causes variation in phenotypes. Bayesian networks provide an elegant statistical approach for multi-t
Externí odkaz:
https://doaj.org/article/f753f66e88054f3ebfedf35636a8c423
Autor:
Maarten Houbraken, Steven Logghe, Marco Schreuder, Pieter Audenaert, Didier Colle, Mario Pickavet
Publikováno v:
Journal of Advanced Transportation, Vol 2017 (2017)
The aim of this paper is to demonstrate the feasibility of a live Automated Incident Detection (AID) system using only Floating Car Data (FCD) in one of the first large-scale FCD AID field trials. AID systems detect traffic events and alert upcoming
Externí odkaz:
https://doaj.org/article/ed541e53a8084f22a9f33cd6338ee252
Publikováno v:
Applied Sciences, Vol 9, Iss 5, p 863 (2019)
Computer network administrators are often interested in the maximal bandwidth that can be achieved between two nodes in the network, or how many edges can fail before the network gets disconnected. Classic maximum flow algorithms that solve these pro
Externí odkaz:
https://doaj.org/article/d6af57c834644f8f9b5803933ac80ba0
Publikováno v:
Applied Sciences, Vol 9, Iss 1, p 117 (2018)
Networks and graphs are highly relevant in modeling real-life communities and their interactions. In order to gain insight in their structure, different roles are attributed to vertices, effectively clustering them in equivalence classes. A new forma
Externí odkaz:
https://doaj.org/article/7ec6c39d639d45a7bffaebec6b1a9455
Publikováno v:
PLoS ONE, Vol 11, Iss 1, p e0147078 (2016)
Graphlets are small subgraphs, usually containing up to five vertices, that can be found in a larger graph. Identification of the graphlets that a vertex in an explored graph touches can provide useful information about the local structure of the gra
Externí odkaz:
https://doaj.org/article/b787af52445e42a2a045ecd402f5c800
Autor:
Maarten Houbraken, Sofie Demeyer, Tom Michoel, Pieter Audenaert, Didier Colle, Mario Pickavet
Publikováno v:
PLoS ONE, Vol 9, Iss 5, p e97896 (2014)
Subgraph matching algorithms are used to find and enumerate specific interconnection structures in networks. By enumerating these specific structures/subgraphs, the fundamental properties of the network can be derived. More specifically in biological
Externí odkaz:
https://doaj.org/article/acf55fd884a3421096d6705bdbfcf37b