Zobrazeno 1 - 10
of 51
pro vyhledávání: '"Pierre-Olivier Estève"'
Autor:
Vishnu Udayakumaran Nair Sunitha Kumary, Bryan J. Venters, Karthikeyan Raman, Sagnik Sen, Pierre-Olivier Estève, Martis W. Cowles, Michael-Christopher Keogh, Sriharsa Pradhan
Publikováno v:
Epigenomes, Vol 8, Iss 2, p 20 (2024)
Nucleosomes are non-uniformly distributed across eukaryotic genomes, with stretches of ‘open’ chromatin strongly associated with transcriptionally active promoters and enhancers. Understanding chromatin accessibility patterns in normal tissue and
Externí odkaz:
https://doaj.org/article/e53eb90ce84a4073af3fe36178d2c68d
Autor:
Pierre-Olivier Estève, Sagnik Sen, Udayakumar S. Vishnu, Cristian Ruse, Hang Gyeong Chin, Sriharsa Pradhan
Publikováno v:
Communications Biology, Vol 5, Iss 1, Pp 1-18 (2022)
SET8 is post-translationally poly ADPribosylated by PARP1 on several lysine residues, leading to SET8 degradation via ubiquitylation and genome-wide aberrant H4K20 methylation.
Externí odkaz:
https://doaj.org/article/99363f409dd743ae9dcafbee136ff4b4
Autor:
Melanie Ehrlich, Kenneth C. Ehrlich, Michelle Lacey, Carl Baribault, Sagnik Sen, Pierre-Olivier Estève, Sriharsa Pradhan
Publikováno v:
Epigenomes, Vol 8, Iss 1, p 4 (2024)
While studying myoblast methylomes and transcriptomes, we found that CDH15 had a remarkable preference for expression in both myoblasts and cerebellum. To understand how widespread such a relationship was and its epigenetic and biological correlates,
Externí odkaz:
https://doaj.org/article/b2b350e91e1e4b9dae196f11679323cf
Publikováno v:
Epigenetics & Chromatin, Vol 14, Iss 1, Pp 1-16 (2021)
Abstract Background Accessible chromatin landscape allows binding of transcription factors, and remodeling of promoter and enhancer elements during development. Chromatin accessibility along with integrated multiomics approaches have been used for de
Externí odkaz:
https://doaj.org/article/3b67d3bcaff44fd39095aff16c99585c
Autor:
V. K. Chaithanya Ponnaluri, Guoqiang Zhang, Pierre-Olivier Estève, George Spracklin, Stephanie Sian, Shuang-yong Xu, Touati Benoukraf, Sriharsa Pradhan
Publikováno v:
Genome Biology, Vol 18, Iss 1, Pp 1-15 (2017)
Abstract Open chromatin profiling integrates information across diverse regulatory elements to reveal the transcriptionally active genome. Tn5 transposase and DNase I sequencing-based methods prefer native or high cell numbers. Here, we describe NicE
Externí odkaz:
https://doaj.org/article/dfaf01e1777849faa5d64a4533642087
Autor:
Hang Gyeong Chin, Udayakumar S. Vishnu, Zhiyi Sun, V. K. Chaithanya Ponnaluri, Guoqiang Zhang, Shuang-yong Xu, Touati Benoukraf, Paloma Cejas, George Spracklin, Pierre-Olivier Estève, Henry W. Long, Sriharsa Pradhan
Publikováno v:
Chromatin Accessibility ISBN: 9781071628980
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::e3303cb444f9829c4af1cb23e079102b
https://doi.org/10.1007/978-1-0716-2899-7_3
https://doi.org/10.1007/978-1-0716-2899-7_3
Publikováno v:
Chromatin Accessibility ISBN: 9781071628980
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::687901d2c8d794240bc9e6cf2e0e13b6
https://doi.org/10.1007/978-1-0716-2899-7_16
https://doi.org/10.1007/978-1-0716-2899-7_16
Publikováno v:
Journal of Molecular Biology. 432:5304-5321
Chromatin accessibility is a predictor of gene expression, cell division, and cell type specificity. NicE-viewSeq (Nicking Enzyme-assisted viewing and Sequencing) allows accessible chromatin visualization and sequencing with overall lower mitochondri
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::99bd607b16ca41e21bad10722d0a6ebe
https://doi.org/10.1016/j.jmb.2020.07.023
https://doi.org/10.1016/j.jmb.2020.07.023
Autor:
Sriharsa Pradhan, Paloma Cejas, Henry W. Long, Hang Gyeong Chin, Pierre-Olivier Estève, Zhiyi Sun, George Spracklin, Pengying Hao, Shuang-yong Xu, Udayakumar S. Vishnu
Publikováno v:
Clinical Epigenetics
Accessible chromatin plays a central role in gene expression and chromatin architecture. Current accessible chromatin approaches depend on limited digestion/cutting and pasting adaptors at the accessible DNA, thus requiring additional materials and t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::803aad8432ac3a26fe2d060083997e31
http://europepmc.org/articles/PMC7507628
http://europepmc.org/articles/PMC7507628
Chromatin accessibility is a predictor of gene expression, cell division and cell type specificity. NicE-viewSeq (Nicking Enzyme assisted viewing and Sequencing) allows accessible chromatin visualization and sequencing with overall lower mitochondria
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::82debf93a1f31ff7b1aa78ad83343ced