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N1-methylation of adenosine (m ¹ A) in ND5 mRNA leads to complex I dysfunction in Alzheimer's disease.

Autor: Jörg M; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany., Plehn JE; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany., Kristen M; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany., Lander M; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany., Walz L; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany., Lietz C; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany., Wijns J; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany., Pichot F; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany., Rojas-Charry L; Institute of Molecular Medicine, University Medical Center Mainz, Langenbeckstr. 1, 55131, Mainz, Germany., Wirtz Martin KM; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany., Ruffini N; Institute for Human Genetics, University Medical Center Johannes Gutenberg University, 55131, Mainz, Germany., Kreim N; Institute of Molecular Biology (IMB), 55128, Mainz, Germany., Gerber S; Institute for Human Genetics, University Medical Center Johannes Gutenberg University, 55131, Mainz, Germany., Motorin Y; Epitranscriptomics and RNA Sequencing (EpiRNA-Seq) Core Facility, UMS2008 IBSLor CNRS, Université de Lorraine-INSERM, Biopôle, 9 Avenue de la Forêt de Haye, 54505, Vandœuvre-lès-Nancy, France.; IMoPA, UMR7365 CNRS, Université de Lorraine, Biopôle, 9 Avenue de la Forêt de Haye, 54505, Vandœuvre-lès-Nancy, France., Endres K; Department of Psychiatry and Psychotherapy, University Medical Center of the Johannes Gutenberg University Mainz, Untere Zahlbacher Str. 8, 55131, Mainz, Germany., Rossmanith W; Center for Anatomy & Cell Biology, Medical University of Vienna, Währinger Straβe 13, 1090, Vienna, Austria., Methner A; Institute of Molecular Medicine, University Medical Center Mainz, Langenbeckstr. 1, 55131, Mainz, Germany., Helm M; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany. mhelm@uni-mainz.de., Friedland K; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg-University Mainz, Staudingerweg 5, 55128, Mainz, Germany. kfriedla@uni-mainz.de.

Publikováno v: Molecular psychiatry [Mol Psychiatry] 2024 May; Vol. 29 (5), pp. 1427-1439. Date of Electronic Publication: 2024 Jan 29.

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Akademický článek

Data Analysis Pipeline for Detection and Quantification of Pseudouridine (ψ) in RNA by HydraPsiSeq.

Autor: Pichot F; Institute of Pharmacy of Pharmacy and Biochemistry, Johannes Gutenberg University Mainz, Mainz, Germany.; Université de Lorraine, CNRS, INSERM, UAR2008/US40 IBSLor, EpiRNA-Seq Core facility, F-54000, Nancy, France., Marchand V; Université de Lorraine, CNRS, INSERM, UAR2008/US40 IBSLor, EpiRNA-Seq Core facility, F-54000, Nancy, France., Helm M; Institute of Pharmacy of Pharmacy and Biochemistry, Johannes Gutenberg University Mainz, Mainz, Germany., Motorin Y; Université de Lorraine, CNRS, INSERM, UAR2008/US40 IBSLor, EpiRNA-Seq Core facility, F-54000, Nancy, France. Yuri.Motorin@univ-lorraine.fr.; Université de Lorraine, CNRS, UMR7365 IMoPA, F-54000, Nancy, France. Yuri.Motorin@univ-lorraine.fr.

Publikováno v: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2023; Vol. 2624, pp. 207-223.

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Akademický článek

Mistuning identification for industrial blisks based on the best achievable eigenvector

Autor: Pichot, F., Laxalde, D., Sinou, J.-J., Thouverez, F., Lombard, J.-P.

Publikováno v: In Computers and Structures 2006 84(29):2033-2049

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Akademický článek

Quantification of substoichiometric modification reveals global tsRNA hypomodification, preferences for angiogenin-mediated tRNA cleavage, and idiosyncratic epitranscriptomes of human neuronal cell-lines.

Autor: Pichot F; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg University Mainz, Staudingerweg 5, 55128 Mainz, Germany.; Université de Lorraine, CNRS, INSERM, IBSLor (UAR2008/US40), Epitranscriptomics and RNA Sequencing Core Facility, F54000 Nancy, France., Hogg MC; Department of Physiology and Medical Physics and SFI FutureNeuro Research Centre, Royal College of Surgeons in Ireland, St. Stephen's Green, Dublin, D02 YN77, Ireland., Marchand V; Université de Lorraine, CNRS, INSERM, IBSLor (UAR2008/US40), Epitranscriptomics and RNA Sequencing Core Facility, F54000 Nancy, France., Bourguignon V; Université de Lorraine, CNRS, INSERM, IBSLor (UAR2008/US40), Epitranscriptomics and RNA Sequencing Core Facility, F54000 Nancy, France.; Université de Lorraine, CNRS, IMoPA (UMR7365), F54000 Nancy, France., Jirström E; Department of Physiology and Medical Physics and SFI FutureNeuro Research Centre, Royal College of Surgeons in Ireland, St. Stephen's Green, Dublin, D02 YN77, Ireland., Farrell C; Department of Physiology and Medical Physics and SFI FutureNeuro Research Centre, Royal College of Surgeons in Ireland, St. Stephen's Green, Dublin, D02 YN77, Ireland., Gibriel HA; Department of Physiology and Medical Physics and SFI FutureNeuro Research Centre, Royal College of Surgeons in Ireland, St. Stephen's Green, Dublin, D02 YN77, Ireland., Prehn JHM; Department of Physiology and Medical Physics and SFI FutureNeuro Research Centre, Royal College of Surgeons in Ireland, St. Stephen's Green, Dublin, D02 YN77, Ireland., Motorin Y; Université de Lorraine, CNRS, INSERM, IBSLor (UAR2008/US40), Epitranscriptomics and RNA Sequencing Core Facility, F54000 Nancy, France.; Université de Lorraine, CNRS, IMoPA (UMR7365), F54000 Nancy, France., Helm M; Institute of Pharmaceutical and Biomedical Sciences, Johannes Gutenberg University Mainz, Staudingerweg 5, 55128 Mainz, Germany.

Publikováno v: Computational and structural biotechnology journal [Comput Struct Biotechnol J] 2022 Dec 19; Vol. 21, pp. 401-417. Date of Electronic Publication: 2022 Dec 19 (Print Publication: 2023).

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Akademický článek

Machine learning algorithm for precise prediction of 2'-O-methylation (Nm) sites from experimental RiboMethSeq datasets.

Autor: Pichot F; Institute of Pharmacy and Biochemistry, Johannes Gutenberg University Mainz, Mainz, Germany; Université de Lorraine, CNRS, INSERM, UAR2008/US40 IBSLor, EpiRNA-Seq Core facility, Nancy F-54000, France., Marchand V; Université de Lorraine, CNRS, INSERM, UAR2008/US40 IBSLor, EpiRNA-Seq Core facility, Nancy F-54000, France., Helm M; Institute of Pharmacy and Biochemistry, Johannes Gutenberg University Mainz, Mainz, Germany., Motorin Y; Université de Lorraine, CNRS, INSERM, UAR2008/US40 IBSLor, EpiRNA-Seq Core facility, Nancy F-54000, France; Université de Lorraine, CNRS, UMR7365 IMoPA, Nancy F-54000, France. Electronic address: motorine5@univ-lorraine.fr.

Publikováno v: Methods (San Diego, Calif.) [Methods] 2022 Jul; Vol. 203, pp. 311-321. Date of Electronic Publication: 2022 Mar 18.

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