Zobrazeno 1 - 10
of 22
pro vyhledávání: '"Phillip Seitzer"'
Autor:
Katherine Labbé, Lauren LeBon, Bryan King, Ngoc Vu, Emily H. Stoops, Nina Ly, Austin E. Y. T. Lefebvre, Phillip Seitzer, Swathi Krishnan, Jin-Mi Heo, Bryson Bennett, Carmela Sidrauski
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-21 (2024)
Abstract The integrated stress response (ISR) enables cells to cope with a variety of insults, but its specific contribution to downstream cellular outputs remains unclear. Using a synthetic tool, we selectively activate the ISR without co-activation
Externí odkaz:
https://doaj.org/article/27e86f13e45248efb23da08ad179a50a
Autor:
Ngoc Vu, Tobias M. Maile, Sudha Gollapudi, Aleksandr Gaun, Phillip Seitzer, Jonathon J. O’Brien, Sean R. Hackett, Jose Zavala-Solorio, Fiona E. McAllister, Ganesh Kolumam, Rob Keyser, Bryson D. Bennett
Publikováno v:
Journal of Lipid Research, Vol 65, Iss 9, Pp 100607- (2024)
Blood plasma is one of the most commonly analyzed and easily accessible biological samples. Here, we describe an automated liquid-liquid extraction platform that generates accurate, precise, and reproducible samples for metabolomic, lipidomic, and pr
Externí odkaz:
https://doaj.org/article/4c2c7606b1f34ce2a12d36d49f908b45
Publikováno v:
Metabolites, Vol 12, Iss 8, p 684 (2022)
MAVEN, an open-source software program for analysis of LC-MS metabolomics data, was originally released in 2010. As mass spectrometry has advanced in the intervening years, MAVEN has been periodically updated to reflect this advancement. This manuscr
Externí odkaz:
https://doaj.org/article/5a74520fdca645c8b15c188af77d6a48
Publikováno v:
Microorganisms, Vol 8, Iss 12, p 1900 (2020)
Operons are a dominant feature of bacterial and archaeal genome organization. Numerous investigations have related aspects of operon structure to operon function, making operons exemplars for studies aimed at deciphering Nature’s design principles
Externí odkaz:
https://doaj.org/article/7b0554862ab141faa61f2f0d0fb8bad3
Publikováno v:
Methods and Protocols, Vol 3, Iss 3, p 54 (2020)
Stable isotopic tracer analysis is a technique used to determine carbon or nitrogen atom incorporation into biological systems. A number of mass spectrometry based approaches have been developed for this purpose, including high-resolution tandem mass
Externí odkaz:
https://doaj.org/article/f521364230124dada4ac16f70c7a52dd
Autor:
Phillip Seitzer, Adrien Jeanniard, Fangrui Ma, James L. Van Etten, Marc T. Facciotti, David D. Dunigan
Publikováno v:
Viruses, Vol 10, Iss 10, p 576 (2018)
Chloroviruses (family Phycodnaviridae) are dsDNA viruses found throughout the world’s inland waters. The open reading frames in the genomes of 41 sequenced chloroviruses (330 ± 40 kbp each) representing three virus types were analyzed for evidence
Externí odkaz:
https://doaj.org/article/75661ef4640a43a9b3c71b3f29b65c8a
Autor:
Rochelle Buffenstein, Matthew Kukurugya, Vladimir Jojic, Jonathon J. O’Brien, Nicole V Haste, Celeste M. Sandoval, Bryson Bennett, Vikram Narayan, Ramin Rad, Adam Baker, Yao Wong, Carmela Sidrauski, Baby Martin-McNulty, Fiona E. McAllister, Phillip Seitzer, Megan Smith, Chunlian Zhang, Ganesh Kolumam, Aleksandr Gaun
Isotopic labeling with deuterium oxide (D2O) is a common technique for estimatingin vivoprotein turnover, but its use has been limited by two long-standing problems: (1) identifying non-monoisotopic peptides; and (2) estimating protein turnover rates
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::0c8b14a2c0f51ff25851e8a845e709cf
https://doi.org/10.1101/2020.11.10.377440
https://doi.org/10.1101/2020.11.10.377440
Publikováno v:
Methods and Protocols
Volume 3
Issue 3
Methods and Protocols, Vol 3, Iss 54, p 54 (2020)
Volume 3
Issue 3
Methods and Protocols, Vol 3, Iss 54, p 54 (2020)
Stable isotopic tracer analysis is a technique used to determine carbon or nitrogen atom incorporation into biological systems. A number of mass spectrometry based approaches have been developed for this purpose, including high-resolution tandem mass
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::888f34e14c50542c80ffe07575f55b91
https://doi.org/10.3390/mps3030054
https://doi.org/10.3390/mps3030054
Autor:
Brian C. Searle, Phillip Seitzer
Publikováno v:
Journal of proteome research. 18(2)
In-source fragmentation occurs as a byproduct of electrospray ionization. We find that ions produced as a result of in-source fragmentation often match fragment ions produced during MS/MS fragmentation, and we take advantage of this phenomenon in a n
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ec2bb240af14736a53fb7d9e88078348
https://pubmed.ncbi.nlm.nih.gov/30295490
https://pubmed.ncbi.nlm.nih.gov/30295490
Autor:
Brian C. Searle, Phillip Seitzer
[ABSTRACT]In-source fragmentation occurs as a byproduct of electrospray ionization. We find that ions produced as a result of in-source fragmentation often match fragment ions produced during MS/MS fragmentation and we take advantage of this phenomen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8a38eed22bf4dfcb78fa1f3ae9e1515b
https://doi.org/10.1101/399105
https://doi.org/10.1101/399105