Zobrazeno 1 - 10
of 431
pro vyhledávání: '"Philippe Lemey"'
Autor:
Annefleur C. Langedijk, Bram Vrancken, Robert Jan Lebbink, Deidre Wilkins, Elizabeth J. Kelly, Eugenio Baraldi, Abiel Homero Mascareñas de Los Santos, Daria M. Danilenko, Eun Hwa Choi, María Angélica Palomino, Hsin Chi, Christian Keller, Robert Cohen, Jesse Papenburg, Jeffrey Pernica, Anne Greenough, Peter Richmond, Federico Martinón-Torres, Terho Heikkinen, Renato T. Stein, Mitsuaki Hosoya, Marta C. Nunes, Charl Verwey, Anouk Evers, Leyla Kragten-Tabatabaie, Marc A. Suchard, Sergei L. Kosakovsky Pond, Chiara Poletto, Vittoria Colizza, Philippe Lemey, Louis J. Bont, on behalf of the INFORM-RSV Study Group
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-12 (2024)
Abstract Respiratory syncytial virus (RSV) is a leading cause of acute lower respiratory tract infection in young children and the second leading cause of infant death worldwide. While global circulation has been extensively studied for respiratory v
Externí odkaz:
https://doaj.org/article/45e7038869c54007951a43a1f120bf0b
Autor:
Benjamin Faucher, Chiara E. Sabbatini, Peter Czuppon, Moritz U. G. Kraemer, Philippe Lemey, Vittoria Colizza, François Blanquart, Pierre-Yves Boëlle, Chiara Poletto
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-13 (2024)
Abstract SARS-CoV-2 variants of concern (VOCs) circulated cryptically before being identified as a threat, delaying interventions. Here we studied the drivers of such silent spread and its epidemic impact to inform future response planning. We focuse
Externí odkaz:
https://doaj.org/article/839dc0eefe7e47308635fa75d4d49ae4
Autor:
Tiago Gräf, Alexander A. Martinez, Gonzalo Bello, Simon Dellicour, Philippe Lemey, Vittoria Colizza, Mattia Mazzoli, Chiara Poletto, Vanessa Leiko Oikawa Cardoso, Alexandre Freitas da Silva, COVIGEN, Fernando Couto Motta, Paola Cristina Resende, Marilda M. Siqueira, Leticia Franco, Lionel Gresh, Jean-Marc Gabastou, Angel Rodriguez, Andrea Vicari, Sylvain Aldighieri, Jairo Mendez-Rico, Juliana Almeida Leite
Publikováno v:
Nature Communications, Vol 15, Iss 1, Pp 1-11 (2024)
Abstract Latin America and Caribbean (LAC) regions were an important epicenter of the COVID-19 pandemic and SARS-CoV-2 evolution. Through the COVID-19 Genomic Surveillance Regional Network (COVIGEN), LAC countries produced an important number of geno
Externí odkaz:
https://doaj.org/article/9d0741c920d340f98f488cc3191a1ab2
Autor:
Senne Heeren, Ilse Maes, Mandy Sanders, Lon-Fye Lye, Vanessa Adaui, Jorge Arevalo, Alejandro Llanos-Cuentas, Lineth Garcia, Philippe Lemey, Stephen M. Beverley, James A. Cotton, Jean-Claude Dujardin, Frederik Van den Broeck
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-15 (2023)
Abstract Viruses are the most abundant biological entities on Earth and play a significant role in the evolution of many organisms and ecosystems. In pathogenic protozoa, the presence of viruses has been linked to an increased risk of treatment failu
Externí odkaz:
https://doaj.org/article/b360bb9341d8425fb0a154408c07de03
Autor:
Mahan Ghafari, Merike Sõmera, Cecilia Sarmiento, Annette Niehl, Eugénie Hébrard, Theocharis Tsoleridis, Jonathan Ball, Benoît Moury, Philippe Lemey, Aris Katzourakis, Denis Fargette
Publikováno v:
PLoS Pathogens, Vol 20, Iss 1, p e1011911 (2024)
The discrepancy between short- and long-term rate estimates, known as the time-dependent rate phenomenon (TDRP), poses a challenge to extrapolating evolutionary rates over time and reconstructing evolutionary history of viruses. The TDRP reveals a de
Externí odkaz:
https://doaj.org/article/9f640a2ba3344a11a8015296755f4810
Publikováno v:
mBio, Vol 15, Iss 1 (2024)
ABSTRACTThe influenza A virus hemagglutinin protein (HA) has been studied extensively in humans but less so in other host species. Here, we compared the rates of nucleotide substitution, protein evolution, and glycosylation in the H1 and H3 head and
Externí odkaz:
https://doaj.org/article/2d9d06b460eb4f87956d733f61932ad5
Autor:
Dillon S. McBride, Sofya K. Garushyants, John Franks, Andrew F. Magee, Steven H. Overend, Devra Huey, Amanda M. Williams, Seth A. Faith, Ahmed Kandeil, Sanja Trifkovic, Lance Miller, Trushar Jeevan, Anami Patel, Jacqueline M. Nolting, Michael J. Tonkovich, J. Tyler Genders, Andrew J. Montoney, Kevin Kasnyik, Timothy J. Linder, Sarah N. Bevins, Julianna B. Lenoch, Jeffrey C. Chandler, Thomas J. DeLiberto, Eugene V. Koonin, Marc A. Suchard, Philippe Lemey, Richard J. Webby, Martha I. Nelson, Andrew S. Bowman
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-15 (2023)
Abstract The zoonotic origin of the COVID-19 pandemic virus highlights the need to fill the vast gaps in our knowledge of SARS-CoV-2 ecology and evolution in non-human hosts. Here, we detected that SARS-CoV-2 was introduced from humans into white-tai
Externí odkaz:
https://doaj.org/article/a94a05233273430581dbcc9e10313db9
Autor:
Atanas V. Demirev, Kyuyoung Lee, Joon-Yong Bae, Heedo Park, Sejik Park, Hyunbeen Kim, Jungmin Lee, Junhyung Cho, Jeong-Sun Yang, Kyung-Chang Kim, Joo-Yeon Lee, Kisoon Kim, Philippe Lemey, Man-Seong Park, Jin Il Kim
Publikováno v:
iScience, Vol 26, Iss 9, Pp 107689- (2023)
Summary: SARS-CoV-2 variants have continuously emerged globally, including in South Korea. To characterize the molecular evolution of SARS-CoV-2 in South Korea, we performed phylogenetic and genomic recombination analyses using more than 12,000 compl
Externí odkaz:
https://doaj.org/article/ef10938a432545669ea225cd62b689f1
Autor:
Cécile Kremer, Andrea Torneri, Pieter J.K. Libin, Cécile Meex, Marie-Pierre Hayette, Sébastien Bontems, Keith Durkin, Maria Artesi, Vincent Bours, Philippe Lemey, Gilles Darcis, Niel Hens, Christelle Meuris
Publikováno v:
Epidemics, Vol 44, Iss , Pp 100701- (2023)
Mathematical modelling studies have shown that repetitive screening can be used to mitigate SARS-CoV-2 transmission in primary schools while keeping schools open. However, not much is known about how transmission progresses within schools and whether
Externí odkaz:
https://doaj.org/article/98b800927a644bc28be7fffbb674fef0
Autor:
Steven Van Borm, Géraldine Boseret, Simon Dellicour, Mieke Steensels, Virginie Roupie, Frank Vandenbussche, Elisabeth Mathijs, Aline Vilain, Michèle Driesen, Marc Dispas, Andy W. Delcloo, Philippe Lemey, Ingeborg Mertens, Marius Gilbert, Bénédicte Lambrecht, Thierry van den Berg
Publikováno v:
Emerging Infectious Diseases, Vol 29, Iss 2, Pp 351-359 (2023)
The high economic impact and zoonotic potential of avian influenza call for detailed investigations of dispersal dynamics of epidemics. We integrated phylogeographic and epidemiologic analyses to investigate the dynamics of a low pathogenicity avian
Externí odkaz:
https://doaj.org/article/ef738f155a184da796685e103f997d73