Zobrazeno 1 - 10
of 17
pro vyhledávání: '"Philip M. Remes"'
Autor:
Lilian R Heil, Philip M Remes, Jesse D Canterbury, Ping Yip, William D Barshop, Christine C Wu, Michael J MacCoss
We report a data independent acquisition (DIA) strategy that dynamically adjusts the tandem mass spectrometry (MS/MS) windows during the chromatographic separation. The method focuses MS/MS acquisition on the most relevant mass range at each point in
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::59c855a0c5d668626c859a7d9f59aa1d
https://doi.org/10.1101/2022.11.29.518428
https://doi.org/10.1101/2022.11.29.518428
Autor:
Michael Landreh, Christopher Mullen, Denis Shutin, Michael P. Goodwin, Joseph Gault, Carol V. Robinson, David P. Lane, Romain Huguet, John E. P. Syka, Hsin-Yung Yen, Rosa Viner, Philip M. Remes, Syma Khalid, Mark T. Agasid, Jani Reddy Bolla, Idlir Liko, Damien Jefferies, Graeme C. McAlister, Marcus J.G.W. Ladds
Publikováno v:
Nat Methods
Nature Methods
Nature Methods
Ligands bound to protein assemblies provide critical information for function, yet are often difficult to capture and define. Here we develop a top-down method, ‘nativeomics’, unifying ‘omics’ (lipidomics, proteomics, metabolomics) analysis w
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7b2165bad3d87e7434248c0c255b98e9
https://doi.org/10.1038/s41592-020-0821-0
https://doi.org/10.1038/s41592-020-0821-0
Publikováno v:
Journal of proteome research. 20(9)
Parallel reaction monitoring (PRM) is an increasingly popular alternative to selected reaction monitoring (SRM) for targeted proteomics. PRM’s strengths over SRM are that it monitors all product ions in a single spectrum, thus eliminating the need
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7a5e919721cf8b8c17461e0851c29e03
https://pubmed.ncbi.nlm.nih.gov/34319745
https://pubmed.ncbi.nlm.nih.gov/34319745
Publikováno v:
Anal Chem
Targeted mass spectrometry methods produce high quality quantitative data in terms of limits of detection and dynamic range, at the cost of a substantial compromise in throughput compared to methods such as data independent and data dependent acquisi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d219dfecab801df1f7a682491c6c0050
https://pubmed.ncbi.nlm.nih.gov/32867497
https://pubmed.ncbi.nlm.nih.gov/32867497
Publikováno v:
International Journal of Mass Spectrometry. 377:368-384
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6f24423d6776ffe73e4e5c7941be2184
https://doi.org/10.1016/j.ijms.2014.08.014
https://doi.org/10.1016/j.ijms.2014.08.014
Publikováno v:
International Journal of Mass Spectrometry. 370:44-57
A methodology for the simulation of mass analysis of ions in RF ion traps is described and demonstrated. This methodology utilizes the very high computational throughput capabilities of a GPU to accelerate ion trajectory modeling by ∼10,000 fold ov
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::66ec22d6b471b62ab702ee96161ad154
https://doi.org/10.1016/j.ijms.2014.06.015
https://doi.org/10.1016/j.ijms.2014.06.015
Autor:
Gary L. Glish, Philip M. Remes
Publikováno v:
The Journal of Physical Chemistry A. 113:3447-3454
Infrared multiphoton dissociation (IRMPD) combined with ion trajectory simulations has been used to obtain probability maps of ion position as a function of different operating parameters in a quadrupole ion trap mass spectrometer. The factors that c
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3e71293766b2d69873804e13f07c5819
https://doi.org/10.1021/jp808955w
https://doi.org/10.1021/jp808955w
Autor:
Maurizio Splendore, Matthias Mann, Jens Griep-Raming, Jesper V. Olsen, Eugen Damoc, Alexander Makarov, Michael W. Senko, Eduard Denisov, Jae C. Schwartz, Eloy R. Wouters, Philip M. Remes, Oliver Lange, Stevan Horning, Michael L. Nielsen, Dennis M. Taylor
Publikováno v:
Molecular & Cellular Proteomics; Vol 8
Molecular & Cellular Proteomics : MCP
Molecular & Cellular Proteomics
Molecular & Cellular Proteomics : MCP
Molecular & Cellular Proteomics
Since its introduction a few years ago, the linear ion trap Orbitrap (LTQ Orbitrap) instrument has become a powerful tool in proteomics research. For high resolution mass spectrometry measurements ions are accumulated in the linear ion trap and passe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5bce36ac387392afbac8d5a2bab17622
Autor:
Philip M. Remes, Gary L. Glish
Publikováno v:
International Journal of Mass Spectrometry. 265:176-181
Quadrupole ion traps have been used successfully as ion storage devices for infrared multiphoton dissociation (IRMPD) experiments. Recently there has been interest in doing low temperature action spectroscopy experiments using ion traps as detectors
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ae50b57b76f218dface5feae37be5a7a
https://doi.org/10.1016/j.ijms.2007.02.004
https://doi.org/10.1016/j.ijms.2007.02.004
Autor:
Alexander Makarov, Lee Earley, Philip M. Remes, Qingyu Song, Mark Hardman, Stevan Horning, Jesse D. Canterbury, August Specht, Oliver Lange, Christopher Mullen, Michael W. Senko, Shannon Eliuk, Huy Bui, Vlad Zabrouskov, Eduard Denisov, Raman Mathur, Justin D. Blethrow
Publikováno v:
Analytical chemistry. 85(24)
Proteome coverage and peptide identification rates have historically advanced in line with improvements to the detection limits and acquisition rate of the mass spectrometer. For a linear ion trap/Orbitrap hybrid, the acquisition rate has been limite
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c22d7c164b8a227408ef74e3c1285f70
https://pubmed.ncbi.nlm.nih.gov/24251866
https://pubmed.ncbi.nlm.nih.gov/24251866