Essential steps in characterizing bacteriophages: Biology, taxonomy, and genome analysis

Autor: Aziz, RK, Ackermann, HW, Petty, NK, Kropinski, AM

© 2018, Springer Science+Business Media LLC. Because of the rise in antimicrobial resistance there has been a significant increase in interest in phages for therapeutic use. Furthermore, the cost of sequencing phage genomes has decreased to the poin

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______363::cd295b1009aa8cadc9664b084a138fcf
https://hdl.handle.net/10453/127775

Biotechnological exploitation of bacteriophage research

Autor: Petty, NK, Evans, TJ, Fineran, PC, Salmond, GPC

The experimentally amenable nature of phage and their use in testing fundamental biological questions have meant that phage research has had a profound effect on modern molecular biology. Phage research has also fuelled multiple biotechnological deve

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=od_______363::68e48273e52399a8e84bd4d9f2e8c575
https://hdl.handle.net/10453/27807

Global dissemination of a multidrug resistant Escherichia coli clone

Autor: Mark A. Schembri, Gordon Dougan, Minh-Duy Phan, Jesús Rodríguez-Baño, David L. Paterson, Danilo Gomes Moriel, Elizabeth Skippington, Álvaro Pascual, Nicola K. Petty, Brian M. Forde, Scott A. Beatson, Johann D. D. Pitout, Benjamin A. Rogers, Mark R. Davies, Kate M. Peters, Timothy R. Walsh, Mathew Upton, Mitchell Stanton-Cook, Nouri L. Ben Zakour, Makrina Totsika

Publikováno v: idUS. Depósito de Investigación de la Universidad de Sevilla
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Escherichia coli sequence type 131 (ST131) is a globally disseminated, multidrug resistant (MDR) clone responsible for a high proportion of urinary tract and bloodstream infections. The rapid emergence and successful spread of E. coli ST131 is strong

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::103de25360addf67e760f165b31dbe97
https://europepmc.org/articles/PMC3992628/

Taxonomy of prokaryotic viruses: 2018-2019 update from the ICTV Bacterial and Archaeal Viruses Subcommittee.

Autor: Adriaenssens EM; Quadram Institute Bioscience, Norwich Research Park, Norwich, Norfolk, NR4 7UQ, UK., Sullivan MB; Department of Microbiology and Civil, Environmental and Geodetic Engineering, The Ohio State University, Columbus, OH, 43210, USA., Knezevic P; Department of Biology and Ecology, Faculty of Sciences, University of Novi Sad, Novi Sad, Serbia., van Zyl LJ; Department of Biotechnology, Institute for Microbial Biotechnology and Metagenomics (IMBM), University of the Western Cape, Bellville, Cape Town, 7535, South Africa., Sarkar BL; ICMR-National Institute of Cholera and Enteric Diseases, P-33, C.I.T. Road, Scheme XM, Beleghata, Kolkata, 700010, India., Dutilh BE; Theoretical Biology and Bioinformatics, Utrecht University, Utrecht, The Netherlands.; Centre for Molecular and Biomolecular Informatics, Radboud University Medical Centre, Nijmegen, The Netherlands., Alfenas-Zerbini P; Laboratory of Industrial Microbiology, Instituto de Biotecnologia Aplicada à Agropecuária, Universidade Federal de Viçosa, Viçosa, Minas Gerais, Brazil., Łobocka M; Department of Microbial Biochemistry, Institute of Biochemistry and Biophysics of the Polish Academy of Sciences, 02-106, Warsaw, Poland., Tong Y; College of Life Science and Technology, Beijing University of Chemical Technology, Beijing, 100029, China., Brister JR; National Center for Biotechnology Information, National Library of Medicine, National Institutes of Health, Bethesda, MD, 20894, USA., Moreno Switt AI; Faculty of Life Sciences, Universidad Andres Bello, Republica 440, 8370146, Santiago, Chile., Klumpp J; Institute of Food, Nutrition and Health, ETH Zurich, 8092, Zurich, Switzerland., Aziz RK; Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Qasr El-Ainy St, Cairo, 11562, Egypt., Barylski J; Department of Molecular Virology, Institute of Experimental Biology, Adam Mickiewicz University, Poznan, Poland., Uchiyama J; School of Veterinary Medicine, Azabu University, Fuchinobe 1-17-71, Chuo-ku, Sagamihara, Kanagawa, 252-0206, Japan., Edwards RA; Department of Computer Science, San Diego State University, San Diego, CA, 92182, USA.; Department of Biology, San Diego State University, San Diego, CA, 92182, USA., Kropinski AM; Food Science Department, University of Guelph, 50 Stone Road East, Guelph, ON, N1G 2W1, Canada. Phage.Canada@gmail.com.; Department of Pathobiology, Ontario Veterinary College, University of Guelph, 50 Stone Road E, Guelph, ON, N1G 2W1, Canada. Phage.Canada@gmail.com., Petty NK; The ithree Institute, University of Technology Sydney, Sydney, NSW, 2007, Australia., Clokie MRJ; Department of Infection, Immunity and Inflammation, University of Leicester, Leicester, LE1 9HN, UK., Kushkina AI; Department of Bacteriophage Molecular Genetics, D.K. Zabolotny Institute of Microbiology and Virology, the NAS of Ukraine, 154 Acad.Zabolotny str, Kyiv, 03143, Ukraine., Morozova VV; Institute of Chemical Biology and Fundamental Medicine (RAS), Novosibirsk, Russia., Duffy S; Department of Ecology, Evolution and Natural Resources, Rutgers University, New Brunswick, NJ, 08901, USA., Gillis A; Section of Molecular Microbiology and Medical Research Council Centre for Molecular Bacteriology and Infection, Imperial College London, London, SW72AZ, UK., Rumnieks J; Latvian Biomedical Research and Study Center, Ratsupites 1, Riga, 1067, Latvia., Kurtböke İ; Genecology Research Centre, School of Science and Engineering, University of the Sunshine Coast, Maroochydore DC, QLD, 4558, Australia., Chanishvili N; G. Eliava Institute of Bacteriophages, Microbiology and Virology, 3 Gotua Street, 0160, Tbilisi, Georgia., Goodridge L; Food Science Department, University of Guelph, 50 Stone Road East, Guelph, ON, N1G 2W1, Canada., Wittmann J; Leibniz Institute DSMZ-German Collection of Microorganisms and Cell Cultures GmbH, 38124, Brunswick, Germany., Lavigne R; Laboratory of Gene Technology, Department of Biosystems, KU Leuven, Kasteelpark Arenberg 21 box 2462, 3001, Leuven, Belgium., Jang HB; Department of Microbiology, The Ohio State University, Columbus, OH, 43210, USA., Prangishvili D; Archaeal Virology Unit, Department of Microbiology, Institut Pasteur, 75015, Paris, France.; Ivane Javakhishvili Tbilisi State University, 0179, Tbilisi, Georgia., Enault F; Université Clermont Auvergne, CNRS, LMGE, 63000, Clermont-Ferrand, France., Turner D; Faculty of Health and Applied Sciences, University of the West of England, Bristol, Frenchay Campus, Bristol, BS16 1QY, UK., Poranen MM; Molecular and Integrative Biosciences Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland., Oksanen HM; Molecular and Integrative Biosciences Research Programme, Faculty of Biological and Environmental Sciences, University of Helsinki, Helsinki, Finland., Krupovic M; Archaeal Virology Unit, Department of Microbiology, Institut Pasteur, 75015, Paris, France.

Publikováno v: Archives of virology [Arch Virol] 2020 May; Vol. 165 (5), pp. 1253-1260.

Essential Steps in Characterizing Bacteriophages: Biology, Taxonomy, and Genome Analysis.

Autor: Aziz RK; Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Qasr El-Ainy, 11562, Cairo, Egypt. ramy.aziz@gmail.com., Ackermann HW; Department of Microbiology, Immunology, and Infectiology, Faculty of Medicine, Université Laval, Quebec, QC, Canada, G1X 4C6., Petty NK; The ithree Institute, University of Technology Sydney, Sydney, NSW, 2007, Australia., Kropinski AM; Departments of Food Science, Molecular and Cellular Biology, and Pathobiology, University of Guelph, Guelph, ON, Canada, N1G 2W1.

Publikováno v: Methods in molecular biology (Clifton, N.J.) [Methods Mol Biol] 2018; Vol. 1681, pp. 197-215.