Výsledky vyhledávání - "Peter Z. Kunszt"

Using synthetic peptides to benchmark peptide identification software and search parameters for MS/MS data analysis

Autor: Mi-Youn Brusniak, Hendrik Weisser, Ruedi Aebersold, Ákos Balaskó, Peter Z. Kunszt, Andreas Quandt, Lars Malmström, Lucia Espona

Publikováno v: EuPA Open Proteomics, Vol 5, Iss C, Pp 21-31 (2014)
EuPA open proteomics, 5

Tandem mass spectrometry and sequence database searching are widely used in proteomics to identify peptides in complex mixtures. Here we present a benchmark study in which a pool of 20,103 synthetic peptides was measured and the resulting data set wa

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fbe0d3dacc4c4e4e7c6cf56a32639147

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iPortal: the swiss grid proteomics portal: Requirements and new features based on experience and usability considerations

Autor: Lars Malmström, Witold Wolski, Bernd Rinn, Chandrasekhar Ramakrishnan, Adam Srebniak, Franz-Josef Elmer, Lorenz C. Blum, Peter Z. Kunszt, Béla Hullár, Emanuel Schmid, Andreas Quandt

Publikováno v: Concurrency and Computation: Practice and Experience. 27:433-445

Summary Development of workflow and data management systems are challenging because of the need to provide a service for users with varying degrees of expertise from novices to experts with more knowledge than the developers. We have received feedbac

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::8d43c526c4d6c04da35f7de73735912b
https://doi.org/10.1002/cpe.3294

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Simultaneous analysis of large-scale RNAi screens for pathogen entry

Publikováno v: BMC genomics
BMC Genomics, 15
BMC Genomics (15), article 1162 (18 p.). (2014)
BMC Genomics
BMC Genomics, 2014, 15, article 1162 (18 p.). ⟨10.1186/1471-2164/15/1162⟩
BMC Genomics, BioMed Central, 2014, 15, article 1162 (18 p.). ⟨10.1186/1471-2164/15/1162⟩

Background Large-scale RNAi screening has become an important technology for identifying genes involved in biological processes of interest. However, the quality of large-scale RNAi screening is often deteriorated by off-targets effects. In order to

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9539cd22b9c8444577acf818184f83f5
https://edoc.unibas.ch/35463/

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File-based replica management

Autor: Kurt Stockinger, Peter Z. Kunszt, Erwin Laure, Heinz Stockinger

Publikováno v: Future Generation Computer Systems. 21:115-123

Data replication is one of the best known strategies to achieve high levels of availability and fault tolerance, as well as minimal access times for large, distributed user communities using a world-wide Data Grid. In certain scientific application d

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::9624a3f893603d33ed00e70e303d2fa3
https://doi.org/10.1016/j.future.2004.09.017

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Replica Management in the European DataGrid Project

Publikováno v: Journal of Grid Computing. 2:341-351

Within the European DataGrid project, Work Package 2 has designed and implemented a set of integrated replica management services for use by data intensive scientific applications. These services, based on the web services model, enable movement and

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2c43e11dc6cd5a70615faee1198fdb5f
https://doi.org/10.1007/s10723-004-5745-x

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The Second Data Release of the Sloan Digital Sky Survey

Autor: Kevork Abazajian, Jennifer K. Adelman-McCarthy, Marcel A. Agüeros, Sahar S. Allam, Kurt, S. J. Anderson, Scott F. Anderson, James Annis, Neta A. Bahcall, Ivan K. Baldry, Steven Bastian, Andreas Berlind, Mariangela Bernardi, Michael R. Blanton, John J. Bochanski, Jr., William N. Boroski, John W. Briggs, J. Brinkmann, Robert J. Brunner, Tamás Budavári, Larry N. Carey, Samuel Carliles, Francisco J. Castander, A. J. Connolly, István Csabai, Mamoru Doi, Feng Dong, Daniel J. Eisenstein, Michael L. Evans, Xiaohui Fan, Douglas P. Finkbeiner, Scott D. Friedman, Joshua A. Frieman, Masataka Fukugita, Roy R. Gal, Bruce Gillespie, Karl Glazebrook, Jim Gray, Eva K. Grebel, James E. Gunn, Vijay K. Gurbani, Patrick B. Hall, Masaru Hamabe, Frederick H. Harris, Hugh C. Harris, Michael Harvanek, Timothy M. Heckman, John S. Hendry, Gregory S. Hennessy, Robert B. Hindsley, Craig J. Hogan, David W. Hogg, Donald J. Holmgren, Shin-ichi Ichikawa, Takashi Ichikawa, Željko Ivezić, Sebastian Jester, David E. Johnston, Anders M. Jorgensen, Stephen M. Kent, S. J. Kleinman, G. R. Knapp, Alexei Yu. Kniazev, Richard G. Kron, Jurek Krzesinski, Peter Z. Kunszt, Nickolai Kuropatkin, Donald Q. Lamb, Hubert Lampeitl, Brian C. Lee, R. French Leger, Nolan Li, Huan Lin, Yeong-Shang Loh, Daniel C. Long, Jon Loveday, Robert H. Lupton, Tanu Malik, Bruce Margon, Takahiko Matsubara, Peregrine M. McGehee, Timothy A. McKay, Avery Meiksin, Jeffrey A. Munn, Reiko Nakajima, Thomas Nash, Eric H. Neilsen, Jr., Heidi Jo Newberg, Peter R. Newman, Robert C. Nichol, Tom Nicinski, Maria Nieto-Santisteban, Atsuko Nitta, Sadanori Okamura, William O'Mullane, Jeremiah P. Ostriker, Russell Owen, Nikhil Padmanabhan, John Peoples, Jeffrey R. Pier, Adrian C. Pope, Thomas R. Quinn, Gordon T. Richards, Michael W. Richmond, Hans-Walter Rix, Constance M. Rockosi, David J. Schlegel, Donald P. Schneider, Ryan Scranton, Maki Sekiguchi, Uros Seljak, Gary Sergey, Branimir Sesar, Erin Sheldon, Kazu Shimasaku, Walter A. Siegmund, Nicole M. Silvestri, J. Allyn Smith, Vernesa Smolčić, Stephanie A. Snedden, Albert Stebbins, Chris Stoughton, Michael A. Strauss, Mark SubbaRao, Alexander S. Szalay, István Szapudi, Paula Szkody, Gyula P. Szokoly, Max Tegmark, Luis Teodoro, Aniruddha R. Thakar, Christy Tremonti, Douglas L. Tucker, Alan Uomoto, Daniel E. Vanden Berk, Jan Vandenberg, Michael S. Vogeley, Wolfgang Voges, Nicole P. Vogt, Lucianne M. Walkowicz, Shu-i Wang, David H. Weinberg, Andrew A. West, Simon D. M. White, Brian C. Wilhite, Yongzhong Xu, Brian Yanny, Naoki Yasuda, Ching-Wa Yip, D. R. Yocum, Donald G. York, Idit Zehavi, Stefano Zibetti, Daniel B. Zucker

Publikováno v: Astronomical Journal
Volume 128
Issue 1

The Sloan Digital Sky Survey has validated and made publicly available its Second Data Release. This data release consists of 3324 square degrees of five-band (u g r i z) imaging data with photometry for over 88 million unique objects, 367,360 spectr

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7c8ddc67cd0d6100807a67b6a13312e4
https://doi.org/10.1086/421365

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Migrating a multiterabyte archive from object to relational databases

Autor: Peter Z. Kunszt, Alexander S. Szalay, Aniruddha R. Thakar, Jim Gray

Publikováno v: Computing in Science & Engineering. 5:16-29

A commercial, object-oriented database engine with custom tools for data-mining the multiterabyte Sloan Digital Sky Survey archive did not meet its performance objectives. We describe the problems, technical issues, and process of migrating this larg

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::dfbf9a6055fa21763bc5ab755e209c62
https://doi.org/10.1109/mcise.2003.1225857

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Sloan Digital Sky Survey: Early Data Release

Autor: Eric H. Neilsen, D. Q. Lamb, R. French Leger, Zoltan Haiman, Brian McLean, Jeffrey R. Pier, Heidi Jo Newberg, Takashi Ichikawa, Michael Odenkirchen, Claudio H. Rivetta, Shu I. Wang, Sadanori Okamura, Don Petravick, John Peoples, Atsuko Nitta, Xiaohui Fan, Peter R. Newman, Stephanie A. Snedden, Damian J. Christian, Jim Gray, Gordon T. Richards, Zlatan Tsvetanov, Eva K. Grebel, Amanda E. Bauer, Angela Prosapio, Stephen B. Bracker, Hans-Walter Rix, Idit Zehavi, M. Haldeman, Christopher W. Stubbs, Michael A. Strauss, Paula Szkody, Robert H. Lupton, Scott F. Anderson, Scott Dodelson, G. Sergey, Naoki Yasuda, James Annis, Vijay K. Narayanan, Craig L. Loomis, Mariangela Bernardi, Masaru Hamabe, David H. Weinberg, Larry N. Carey, Walter Dehnen, Mark SubbaRao, Wolfgang Voges, David W. Hogg, Ernst De Haas, Timothy A. McKay, Megan Donahue, Zeljko Ivezic, John Korienek, Roy R. Gal, Julianne J. Dalcanton, Aronne Merelli, Craig J. Hogan, Jon Arne Bakken, Daniel J. Eisenstein, Paul C. Czarapata, Michael Harvanek, Bruce Margon, Karl Glazebrook, Maki Sekiguchi, Ravi K. Sheth, Robert Rosner, István Csabai, Charles L. Hull, David J. Schlegel, Jon A. Holtzman, Rene A. M. Walterbos, Peregrine M. McGehee, Guinevere Kauffmann, Ryan Scranton, Hans Böhringer, Brian Yanny, Brian C. Lee, Masataka Fukugita, James H. Crocker, Robert J. Brunner, Gretchen Greene, Donald G. York, Paul M. Mantsch, Bing Chen, S. J. Kleinman, Mamoru Doi, Osamu Nakamura, Anatoly Klypin, David Johnston, Rita S. J. Kim, L. Eyer, John E. Anderson, T. Nicinski, D. Wolfe, Bruce Greenawalt, Gregory S. Hennessy, Wei Zheng, Michael A. Carr, Douglas L. Tucker, Timothy M. Heckman, Simon D. M. White, K. Shimasaku, Andrew J. Connolly, Dale Sandford, Jon Brinkmann, Donald P. Schneider, Shin-Ichi Ichikawa, Matthias Bartelmann, Brian R. Elms, Edward J. Mannery, Scott Burles, Aniruddha R. Thakar, Michael Richmond, Thomas R. Quinn, Peter Z. Kunszt, Chris Stoughton, Houjun Mo, R. S. Peterson, Carl Lindenmeyer, Stephen A. Smee, Richard G. Kron, Hugh C. Harris, Francisco J. Castander, Amina Helmi, Tim Kimball, T. Dombeck, Jennifer Adelman, Julian H. Krolik, David G. Monet, Chih-Hao Huang, Jeffrey J. E. Hayes, Scott D. Friedman, S. Kent, Brad M. S. Hansen, Steven Bastian, Neta A. Bahcall, Russell Owen, Dan Long, Albert Stebbins, Gyula P. Szokoly, Siriluk Limmongkol, Patrick L. Colestock, R. Rechenmacher, Michael R. Blanton, Ruth Pordes, Richard L. White, George Pauls, Michael S. Vogeley, Patrick B. Hall, Kristen Menou, John W. Briggs, Joshua A. Frieman, Brian C. Wilhite, Jeffrey A. Munn, Daniel E. Vanden Berk, Donald J. Holmgren, Michael L. Evans, Robert B. Hindsley, E. Kinney, Bryan Mackinnon, Frederick H. Harris, Thomas Nash, J. Allyn Smith, Jurek Krzesinski, James E. Gunn, John Eric Davis, Alan Uomoto, Jon Loveday, A. A. Henden, E. Berman, Suzanne L. Hawley, Masaru Watanabe, Nancy Ellman, Marc Postman, Adrian Pope, Patrick Waddell, Constance M. Rockosi, István Szapudi, Jeremiah P. Ostriker, William N. Boroski, Charlie Briegel, Glenn R. Federwitz, Avery Meiksin, Gillian R. Knapp, Robert C. Nichol, Arthur F. Davidsen, S. Tabachnik, K. Ruthmansdorfer, Mark A. Klaene, Bruce Gillespie, Alexander S. Szalay, Norio Okada

Publikováno v: The Astronomical Journal. 123:485-548

The Sloan Digital Sky Survey (SDSS) is an imaging and spectroscopic survey that will eventually cover approximately one-quarter of the celestial sphere and collect spectra of ≈106 galaxies, 100,000 quasars, 30,000 stars, and 30,000 serendipity targ

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::8dc6f5df6f860107248ac29bde9891fe
https://doi.org/10.1086/324741

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Towards a Swiss National Research Infrastructure

Autor: Simon Leinen, Thomas Michael Bohnert, Sigve Haug, Heinz Stockinger, Placi Flury, Andrew Edmonds, Sergio Maffioletti, Markus Eurich, Eryk Schiller, Peter Z. Kunszt, Dean Flanders, Almerima Jamakovic-Kapic

Publikováno v: Euro-Par 2013: Parallel Processing Workshops ISBN: 9783642544194
Euro-Par Workshops

In this position paper we describe the current status and plans for a Swiss National Research Infrastructure. Swiss academic and research institutions are very autonomous. While being loosely coupled, they do not rely on any centralized management en

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2984be70e180c55ecefe9337120c1733
https://www.zora.uzh.ch/id/eprint/175061/

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