Zobrazeno 1 - 10
of 213
pro vyhledávání: '"Peter J Schaap"'
Autor:
William T Scott, Sara Benito-Vaquerizo, Johannes Zimmermann, Djordje Bajić, Almut Heinken, Maria Suarez-Diez, Peter J Schaap
Publikováno v:
PLoS Computational Biology, Vol 19, Iss 8, p e1011363 (2023)
Harnessing the power of microbial consortia is integral to a diverse range of sectors, from healthcare to biotechnology to environmental remediation. To fully realize this potential, it is critical to understand the mechanisms behind the interactions
Externí odkaz:
https://doaj.org/article/bea255732a834a03bb544b2ca97e6d86
Autor:
Maksim Zakhartsev, Filip Rotnes, Marie Gulla, Ove Øyås, Jesse C J van Dam, Maria Suarez-Diez, Fabian Grammes, Róbert Anton Hafþórsson, Wout van Helvoirt, Jasper J Koehorst, Peter J Schaap, Yang Jin, Liv Torunn Mydland, Arne B Gjuvsland, Simen R Sandve, Vitor A P Martins Dos Santos, Jon Olav Vik
Publikováno v:
PLoS Computational Biology, Vol 18, Iss 6, p e1010194 (2022)
Atlantic salmon (Salmo salar) is the most valuable farmed fish globally and there is much interest in optimizing its genetics and rearing conditions for growth and feed efficiency. Marine feed ingredients must be replaced to meet global demand, with
Externí odkaz:
https://doaj.org/article/e6e49de5fa984287919c9065708d69b4
Autor:
Lenny de Jaeger, Benoit M Carreres, Jan Springer, Peter J Schaap, Gerrit Eggink, Vitor A P Martins Dos Santos, Rene H Wijffels, Dirk E Martens
Publikováno v:
PLoS ONE, Vol 13, Iss 4, p e0194834 (2018)
Neochloris oleoabundans is an oleaginous microalgal species that can be cultivated in fresh water as well as salt water. Using salt water gives the opportunity to reduce production costs and the fresh water footprint for large scale cultivation. Prod
Externí odkaz:
https://doaj.org/article/3f217154a4924b8789761e0f2c66fccf
Autor:
Kalyanasundaram Subramanian, Artur Góra, Ruud Spruijt, Karolina Mitusińska, Maria Suarez-Diez, Vitor Martins Dos Santos, Peter J Schaap
Publikováno v:
PLoS ONE, Vol 13, Iss 6, p e0198990 (2018)
D-amino acid oxidase (DAAO) degrades D-amino acids to produce α-ketoacids, hydrogen peroxide and ammonia. DAAO has often been investigated and engineered for industrial and clinical applications. We combined information from literature with a detail
Externí odkaz:
https://doaj.org/article/c1901d9d234145f68756cd2fee2dbd9c
Autor:
Tom van den Bergh, Giorgio Tamo, Alberto Nobili, Yifeng Tao, Tianwei Tan, Uwe T Bornscheuer, Remko K P Kuipers, Bas Vroling, René M de Jong, Kalyanasundaram Subramanian, Peter J Schaap, Tom Desmet, Bernd Nidetzky, Gert Vriend, Henk-Jan Joosten
Publikováno v:
PLoS ONE, Vol 12, Iss 5, p e0176427 (2017)
CorNet is a web-based tool for the analysis of co-evolving residue positions in protein super-family sequence alignments. CorNet projects external information such as mutation data extracted from literature on interactively displayed groups of co-evo
Externí odkaz:
https://doaj.org/article/99184a75be76410da58c9c377339d349
Autor:
Nico J Claassens, Melvin F Siliakus, Sebastiaan K Spaans, Sjoerd C A Creutzburg, Bart Nijsse, Peter J Schaap, Tessa E F Quax, John van der Oost
Publikováno v:
PLoS ONE, Vol 12, Iss 9, p e0184355 (2017)
High-level, recombinant production of membrane-integrated proteins in Escherichia coli is extremely relevant for many purposes, but has also been proven challenging. Here we study a combination of transcriptional fine-tuning in E. coli LEMO21(DE3) wi
Externí odkaz:
https://doaj.org/article/c963d8bea3bf4f098f799476ca6e0702
Identification of a Novel L-rhamnose Uptake Transporter in the Filamentous Fungus Aspergillus niger.
Autor:
Jasper Sloothaak, Dorett I Odoni, Vitor A P Martins Dos Santos, Peter J Schaap, Juan Antonio Tamayo-Ramos
Publikováno v:
PLoS Genetics, Vol 12, Iss 12, p e1006468 (2016)
The study of plant biomass utilization by fungi is a research field of great interest due to its many implications in ecology, agriculture and biotechnology. Most of the efforts done to increase the understanding of the use of plant cell walls by fun
Externí odkaz:
https://doaj.org/article/e519c0af7e1542f9820397acbe77d1e3
Autor:
Mark Davids, Floor Hugenholtz, Vitor Martins dos Santos, Hauke Smidt, Michiel Kleerebezem, Peter J Schaap
Publikováno v:
PLoS ONE, Vol 11, Iss 1, p e0146423 (2016)
BACKGROUND:Metatranscriptomic landscapes can provide insights in functional relationships within natural microbial communities. Analysis of complex metatranscriptome datasets of these communities poses a considerable bioinformatic challenge since the
Externí odkaz:
https://doaj.org/article/3d846efb40794c1e9112e9f2a8488b6a
Autor:
Edoardo Saccenti, David Nieuwenhuijse, Jasper J Koehorst, Vitor A P Martins dos Santos, Peter J Schaap
Publikováno v:
PLoS ONE, Vol 10, Iss 9, p e0137908 (2015)
Understanding the diversity and robustness of the metabolism of bacteria is fundamental for understanding how bacteria evolve and adapt to different environments. In this study, we characterised 121 Streptococcus strains and studied metabolic diversi
Externí odkaz:
https://doaj.org/article/6613bb1687f04473b91af83f8253a699
Publikováno v:
PLoS ONE, Vol 10, Iss 4, p e0124880 (2015)
Eukaryotic Argonaute proteins mediate RNA-guided RNA interference, allowing both regulation of host gene expression and defense against invading mobile genetic elements. Recently, it has become evident that prokaryotic Argonaute homologs mediate DNA-
Externí odkaz:
https://doaj.org/article/1dceb25b7f484e78a4adf93122b94559