Zobrazeno 1 - 10
of 73
pro vyhledávání: '"Peter J A Cock"'
Autor:
Nomi L Harris, Peter J A Cock, Hilmar Lapp, Brad Chapman, Rob Davey, Christopher Fields, Karsten Hokamp, Monica Munoz-Torres
Publikováno v:
PLoS Computational Biology, Vol 12, Iss 2, p e1004691 (2016)
The Bioinformatics Open Source Conference (BOSC) is organized by the Open Bioinformatics Foundation (OBF), a nonprofit group dedicated to promoting the practice and philosophy of open source software development and open science within the biological
Externí odkaz:
https://doaj.org/article/5ebb37b5736342dd820c0b913fb26465
Autor:
Taisei Kikuchi, James A Cotton, Jonathan J Dalzell, Koichi Hasegawa, Natsumi Kanzaki, Paul McVeigh, Takuma Takanashi, Isheng J Tsai, Samuel A Assefa, Peter J A Cock, Thomas Dan Otto, Martin Hunt, Adam J Reid, Alejandro Sanchez-Flores, Kazuko Tsuchihara, Toshiro Yokoi, Mattias C Larsson, Johji Miwa, Aaron G Maule, Norio Sahashi, John T Jones, Matthew Berriman
Publikováno v:
PLoS Pathogens, Vol 7, Iss 9, p e1002219 (2011)
Bursaphelenchus xylophilus is the nematode responsible for a devastating epidemic of pine wilt disease in Asia and Europe, and represents a recent, independent origin of plant parasitism in nematodes, ecologically and taxonomically distinct from othe
Externí odkaz:
https://doaj.org/article/5b9b7d20f180440c9f667bb7948adcf3
THAPBI PICT is an open source software pipeline for metabarcoding analysis with multiplexed Illumina paired-end reads, including where different amplicons are sequenced together. We demonstrate using worked examples with our own and public data sets
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::bf52e2bf5bd2ac5532a3bba00c69535d
https://doi.org/10.1101/2023.03.24.534090
https://doi.org/10.1101/2023.03.24.534090
Autor:
Kadiatou Schiffer-Forsyth, Debra Frederickson Frederickson Matika, Pete E. Hedley, Peter J. A. Cock, Sarah Green
Publikováno v:
Horticulturae. 9:616
Phytophthora is a genus of destructive plant pathogens. Certain species are damaging to native ecosystems, forestry, and the horticultural sector, and there is evidence of their dissemination in plant imports. Horticultural nurseries are central node
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::10021b479f3bfed3c28ad8b4786d469d
https://doi.org/10.3390/horticulturae9060616
https://doi.org/10.3390/horticulturae9060616
Autor:
Federico La Spada, Peter J. A. Cock, Eva Randall, Antonella Pane, David E. L. Cooke, Santa Olga Cacciola
Publikováno v:
Journal of Fungi; Volume 8; Issue 4; Pages: 330
Isolation techniques supplemented by sequencing of DNA from axenic cultures have provided a robust methodology for the study of Phytophthora communities in agricultural and natural ecosystems. Recently, metabarcoding approaches have emerged as new pa
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4acf3d0b7ec151485e08be302cf3176b
Autor:
Pierre-Yves Véronneau, Miroslaw Sobczak, Slawomir Janakowski, John T. Jones, Joanne Tze-Yin Lim, Peter J. A. Cock, Kyriakos Varypatakis, Miles R. Armstrong, Benjamin Mimee, Ingo Hein, Peter Thorpe, Vivian C. Blok
Publikováno v:
GENES
Genes, Vol 11, Iss 1429, p 1429 (2020)
Genes
Volume 11
Issue 12
Genes, Vol 11, Iss 1429, p 1429 (2020)
Genes
Volume 11
Issue 12
This work was funded through an AHDB PhD award, the USDA GLOBAL Project and by the Rural and Environmental Science and Analytical Services division of the Scottish Government. Bioinformatics and computational analyses for the generation of the new G.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f93896ddc4ab9764be8823c8574df2e7
https://hdl.handle.net/10023/21108
https://hdl.handle.net/10023/21108
Autor:
Jamie N. Orr, Roy Neilson, Thomas E. Freitag, David M. Roberts, Keith G. Davies, Vivian C. Blok, Peter J. A. Cock
Publikováno v:
Frontiers in Plant Science
Frontiers in Plant Science, Vol 10 (2020)
Frontiers in Plant Science, Vol 10 (2020)
Pasteuria spp. are endospore forming bacteria which act as natural antagonists to many of the most economically significant plant parasitic nematodes (PPNs). Highly species-specific nematode suppression may be observed in soils containing a sufficien
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::234bc8ff20f793246239e52699df600f
https://hdl.handle.net/11250/2688618
https://hdl.handle.net/11250/2688618
Autor:
Nomi L. Harris, Yo Yehudi, Jessica Maia, Karsten Hokamp, Christopher J. Fields, Morgan Taschuk, Peter J. A. Cock, Monica Munoz-Torres
Publikováno v:
F1000Research
Launched in 2000 and held every year since, the Bioinformatics Open Source Conference (BOSC) is a volunteer-run meeting coordinated by the Open Bioinformatics Foundation (OBF) that covers open source software development and open science in bioinform
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::37e820f87337ed9e7b3d539c6ef446da
https://escholarship.org/uc/item/6pd4b1rf
https://escholarship.org/uc/item/6pd4b1rf
Autor:
Heather L. Wiencko, Nomi L. Harris, Peter J. A. Cock, Monica Munoz-Torres, Yo Yehudi, Karsten Hokamp, Bastian Greshake Tzovaras, Alexander Peltzer, Bastian Rieck, Christopher J. Fields, Michael L. Heuer
Publikováno v:
F1000Research
The Bioinformatics Open Source Conference is a volunteer-organized meeting that covers open source software development and open science in bioinformatics. Launched in 2000, BOSC has been held every year since. BOSC 2019, the 20th annual BOSC, took p
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::34d1df9a0947049d945399608b37db66
http://europepmc.org/articles/PMC6971845
http://europepmc.org/articles/PMC6971845
Autor:
Karsten Hokamp, Malvika Sharan, Jason Williams, Christopher J. Fields, Nomi L. Harris, Peter J. A. Cock, Monica Munoz-Torres, Jessica Maia
Publikováno v:
F1000Research
The 22nd annual Bioinformatics Open Source Conference (BOSC 2021, open-bio.org/events/bosc-2021/) was held online as a track of the 2021 Intelligent Systems for Molecular Biology / European Conference on Computational Biology (ISMB/ECCB) conference.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3c850f2772cbc6dd621f2d91a38cd69b
https://doi.org/10.12688/f1000research.74074.1
https://doi.org/10.12688/f1000research.74074.1