Zobrazeno 1 - 10 of 91 pro vyhledávání: '"Peter G Foster"'
1
Akademický článek
Can quartet analyses combining maximum likelihood estimation and Hennigian logic overcome long branch attraction in phylogenomic sequence data?
Autor: Patrick Kück, Mark Wilkinson, Christian Groß, Peter G Foster, Johann W Wägele
Publikováno v: PLoS ONE, Vol 12, Iss 8, p e0183393 (2017)
Systematic biases such as long branch attraction can mislead commonly relied upon model-based (i.e. maximum likelihood and Bayesian) phylogenetic methods when, as is usually the case with empirical data, there is model misspecification. We present Ph
Externí odkaz: https://doaj.org/article/2bb6e25b9ec144b18d626613fc9b4739
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2
Akademický článek
The mitochondrial genome of Parascaris univalens - implications for a 'forgotten' parasite
Autor: Abdul Jabbar, D Timothy J Littlewood, Namitha Mohandas, Andrew G Briscoe, Peter G Foster, Fritz Müller, Georg von Samson-Himmelstjerna, Aaron R Jex, Robin B Gasser
Publikováno v: Parasites & Vectors, Vol 7, Iss 1, Pp 1-8 (2014)
Abstract Background Parascaris univalens is an ascaridoid nematode of equids. Little is known about its epidemiology and population genetics in domestic and wild horse populations. PCR-based methods are suited to support studies in these areas, provi
Externí odkaz: https://doaj.org/article/1065b36fccc8408f8454fe80eb17f388
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3
Akademický článek
Next-Generation Mitogenomics: A Comparison of Approaches Applied to Caecilian Amphibian Phylogeny.
Autor: Simon T Maddock, Andrew G Briscoe, Mark Wilkinson, Andrea Waeschenbach, Diego San Mauro, Julia J Day, D Tim J Littlewood, Peter G Foster, Ronald A Nussbaum, David J Gower
Publikováno v: PLoS ONE, Vol 11, Iss 6, p e0156757 (2016)
Mitochondrial genome (mitogenome) sequences are being generated with increasing speed due to the advances of next-generation sequencing (NGS) technology and associated analytical tools. However, detailed comparisons to explore the utility of alternat
Externí odkaz: https://doaj.org/article/5eb31cb0d302435d8b4702ba26641e12
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4
Akademický článek
Resurrection of Anopheles goeldii from synonymy with Anopheles nuneztovari (Diptera, Culicidae) and a new record for Anopheles dunhami in the Brazilian Amazon
Autor: Daniéla C Calado, Peter G Foster, Eduardo S Bergo, Cecília LS dos Santos, Allan Kardec R Galardo, Maria Anice Mureb Sallum
Publikováno v: Memorias do Instituto Oswaldo Cruz, Vol 103, Iss 8, Pp 791-799 (2008)
Nucleotide sequences of the internal transcribed spacer 2 (ITS2) rDNA and partial sequences of the cytochrome coxidase subunit I (COI) mtDNA and white gene nDNA were obtained from specimens of Anopheles nuneztovari A collected in Macapá (state of Am
Externí odkaz: https://doaj.org/article/ea630f387280439a86c8d1e6ea6766b3
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5
Akademický článek
Phylogenetic analysis and DNA-based species confirmation in Anopheles (Nyssorhynchus).
Autor: Peter G Foster, Eduardo S Bergo, Brian P Bourke, Tatiane M P Oliveira, Sandra S Nagaki, Denise C Sant'Ana, Maria Anice M Sallum
Publikováno v: PLoS ONE, Vol 8, Iss 2, p e54063 (2013)
Specimens of neotropical Anopheles (Nyssorhynchus) were collected and identified morphologically. We amplified three genes for phylogenetic analysis-the single copy nuclear white and CAD genes, and the COI barcode region. Since we had multiple specim
Externí odkaz: https://doaj.org/article/1ce88f42165f479a9b2f0ceb8dc06043
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6
Phylogenetic Analysis That Models Compositional Heterogeneity over the Tree
Autor: Peter G, Foster
Publikováno v: Methods in molecular biology (Clifton, N.J.). 2569
Molecular sequences in a phylogenetic analysis can differ in composition, and that shows that the process of evolution can change over time. However, models of evolution in common use are homogeneous over the tree, and if used in a phylogenetic analy
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid________::225e81af530d3e094eba8f374eca7a34
https://pubmed.ncbi.nlm.nih.gov/36083446
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9
Recoding amino acids to a reduced alphabet may increase or decrease phylogenetic accuracy
Autor: Peter G Foster, Dominik Schrempf, Gergely J Szöllősi, Tom A Williams, Cymon J Cox, T Martin Embley
Common molecular phylogenetic characteristics such as long branches and compositional heterogeneity can be problematic for phylogenetic reconstruction when using amino acid data. Recoding alignments to reduced alphabets before phylogenetic analysis h
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2730147996a7b31c43780112b52ce6bb
https://hdl.handle.net/10400.1/18697
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10
Phylogenomics provides robust support for a two-domains tree of life
Autor: Gergely J. Szöllősi, Peter G. Foster, Tom A. Williams, Cymon J. Cox, T. Martin Embley
Publikováno v: Nature Ecology & Evolution
Repositório Científico de Acesso Aberto de Portugal
Repositório Científico de Acesso Aberto de Portugal (RCAAP)
instacron:RCAAP
Nature ecology & evolution
Williams, T A, Cox, C J, Foster, P G, Szöllősi, G J & Embley, T M 2020, ' Phylogenomics provides robust support for a two-domains tree of life ', Nature Ecology and Evolution, vol. 4, pp. 138-147 . https://doi.org/10.1038/s41559-019-1040-x
Hypotheses about the origin of eukaryotic cells are classically framed within the context of a universal 'tree of life' based on conserved core genes. Vigorous ongoing debate about eukaryote origins is based on assertions that the topology of the tre
Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f4d7b4af617b1c790d272840816be16c
https://doi.org/10.1038/s41559-019-1040-x
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