Zobrazeno 1 - 10
of 24
pro vyhledávání: '"Peter F. Andeer"'
Autor:
Hsiao-Han Lin, Marta Torres, Catharine A. Adams, Peter F. Andeer, Trenton K. Owens, Kateryna Zhalnina, Lauren K. Jabusch, Hans K. Carlson, Jennifer V. Kuehl, Adam M. Deutschbauer, Trent R. Northen, N. Louise Glass, Jenny C. Mortimer
Publikováno v:
Phytobiomes Journal, Vol 8, Iss 2, Pp 155-167 (2024)
Studying plant–microbe–soil interactions is challenging due to their high complexity and variability in natural ecosystems. While fabricated ecosystems provide opportunities to recapitulate aspects of these systems in reduced complexity and contr
Externí odkaz:
https://doaj.org/article/02cc55a873ae458cb6dce66df619debe
Autor:
Marc W. Van Goethem, Andrew R. Osborn, Benjamin P. Bowen, Peter F. Andeer, Tami L. Swenson, Alicia Clum, Robert Riley, Guifen He, Maxim Koriabine, Laura Sandor, Mi Yan, Chris G. Daum, Yuko Yoshinaga, Thulani P. Makhalanyane, Ferran Garcia-Pichel, Axel Visel, Len A. Pennacchio, Ronan C. O’Malley, Trent R. Northen
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-10 (2021)
Marc Van Goethem et al. combine short- and long-read sequencing from biocrust samples to report nearly 3,000 biosynthetic gene clusters (BGCs) encoding microbial secondary metabolites. Their results demonstrate the advantage of integrated metatranscr
Externí odkaz:
https://doaj.org/article/eae224afa2b747cc9f684dcc3d7db239
Autor:
Ying Wang, Roland C. Wilhelm, Tami L. Swenson, Anita Silver, Peter F. Andeer, Amber Golini, Suzanne M. Kosina, Benjamin P. Bowen, Daniel H. Buckley, Trent R. Northen
Publikováno v:
Frontiers in Microbiology, Vol 13 (2022)
Microorganisms have evolved various life-history strategies to survive fluctuating resource conditions in soils. However, it remains elusive how the life-history strategies of microorganisms influence their processing of organic carbon, which may aff
Externí odkaz:
https://doaj.org/article/96d3081c2fdb44d0bf1bfb035c5ee66b
Autor:
Markus de Raad, Yifan V. Li, Jennifer V. Kuehl, Peter F. Andeer, Suzanne M. Kosina, Andrew Hendrickson, Nicholas R. Saichek, Amber N. Golini, La Zhen Han, Ying Wang, Benjamin P. Bowen, Adam M. Deutschbauer, Adam P. Arkin, Romy Chakraborty, Trent R. Northen
Publikováno v:
Frontiers in Microbiology, Vol 13 (2022)
Exometabolomics is an approach to assess how microorganisms alter, or react to their environments through the depletion and production of metabolites. It allows the examination of how soil microbes transform the small molecule metabolites within thei
Externí odkaz:
https://doaj.org/article/2582858633924c35a57655987a2a02c2
Autor:
Larry M. York, Jonathan R. Cumming, Adrianna Trusiak, Gregory Bonito, Adam C. vonHaden, Udaya C. Kalluri, Lisa K. Tiemann, Peter F. Andeer, Elena Blanc‐Betes, Jonathan H. Diab, Alonso Favela, Amandine Germon, Nuria Gomez‐Casanovas, Charles A. Hyde, Angela D. Kent, Dae Kwan Ko, Austin Lamb, Ali M. Missaoui, Trent R. Northen, Yunqiao Pu, Arthur J. Ragauskas, Sierra Raglin, Henrik V. Scheller, Lorenzo Washington, Wendy H. Yang
Publikováno v:
Plant Phenome Journal, Vol 5, Iss 1, Pp n/a-n/a (2022)
Abstract Bioenergy production often focuses on the aboveground feedstock production for conversion to fuel and other materials. However, the belowground component is crucial for soil carbon sequestration, greenhouse gas fluxes, and ecosystem function
Externí odkaz:
https://doaj.org/article/bef74534b4f6479c9744ca4e87f72160
Autor:
Cristina N. Butterfield, Zhou Li, Peter F. Andeer, Susan Spaulding, Brian C. Thomas, Andrea Singh, Robert L. Hettich, Kenwyn B. Suttle, Alexander J. Probst, Susannah G. Tringe, Trent Northen, Chongle Pan, Jillian F. Banfield
Publikováno v:
PeerJ, Vol 4, p e2687 (2016)
Annually, half of all plant-derived carbon is added to soil where it is microbially respired to CO2. However, understanding of the microbiology of this process is limited because most culture-independent methods cannot link metabolic processes to the
Externí odkaz:
https://doaj.org/article/53e34cf41ce2444096f56351db78bc59
Autor:
Vlastimil Novak, Peter F. Andeer, Benjamin P. Bowen, Yezhang Ding, Kateryna Zhalnina, Connor Tomaka, Amber N. Golini, Suzanne M. Kosina, Trent R. Northen
Understanding plant-microbe interactions requires examination of root exudation under nutrient stress using standardized and reproducible experimental systems. We grewBrachypodium distachyonhydroponically in novel fabricated ecosystem devices (EcoFAB
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ef7eb97a2000f342a3b70e38f1b826c6
https://doi.org/10.1101/2023.01.18.524647
https://doi.org/10.1101/2023.01.18.524647
Autor:
Shwetha M. Acharya, Mon Oo Yee, Spencer Diamond, Peter F. Andeer, Nameera F. Baig, Omolara T. Aladesanmi, Trent R. Northen, Jillian F. Banfield, Romy Chakraborty
For a deeper and comprehensive understanding of the diversity, composition and function of rhizosphere microbiomes, we need to focus at the scale of individual roots in standardized growth containers. Root exudation patterns are known to vary across
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::7299399b9c4f02a8c876f1d8bf1d18c5
https://doi.org/10.1101/2023.01.20.524947
https://doi.org/10.1101/2023.01.20.524947
Autor:
Trent R. Northen, Andrew R. Osborn, Len A. Pennacchio, Yuko Yoshinaga, Marc W. Van Goethem, Axel Visel, Thulani P. Makhalanyane, Tami L. Swenson, Benjamin P. Bowen, Alicia Clum, Mi Yan, Guifen He, Chris Daum, Ronan C. O'Malley, Maxim Koriabine, Laura Sandor, Ferran Garcia-Pichel, Robert Riley, Peter F. Andeer
Publikováno v:
Communications Biology, Vol 4, Iss 1, Pp 1-10 (2021)
Communications biology, vol 4, iss 1
Communications Biology
Communications biology, vol 4, iss 1
Communications Biology
Microbial biosynthetic gene clusters (BGCs) encoding secondary metabolites are thought to impact a plethora of biologically mediated environmental processes, yet their discovery and functional characterization in natural microbiomes remains challengi
Autor:
Yuntao Hu, Peter F. Andeer, Qing Zheng, Suzanne M. Kosina, Kolby J. Jardine, Yezhang Ding, La Zhen Han, Yu Gao, Karsten Zengler, Benjamin P. Bowen, Jenny C. Mortimer, John P. Vogel, Trent R. Northen
SummaryRoot exudation has been extensively studied due to its importance in soil carbon cycling and in supporting growth of soil microbes. However, the extent and dynamics of plant uptake of exogenous metabolites is poorly understood. To gain new ins
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::88422e8a7acf98bbf78f7ae7e716e4c9
https://doi.org/10.1101/2022.07.29.496484
https://doi.org/10.1101/2022.07.29.496484