Zobrazeno 1 - 10
of 17
pro vyhledávání: '"Peter Daldrop"'
Autor:
Sebastian Wierer, Peter Daldrop, Misbha Ud Din Ahmad, Winfried Boos, Malte Drescher, Wolfram Welte, Ralf Seidel
Publikováno v:
PLoS ONE, Vol 11, Iss 5, p e0156098 (2016)
In many hyperthermophilic archaea the DNA binding protein TrmBL2 or one of its homologues is abundantly expressed. TrmBL2 is thought to play a significant role in modulating the chromatin architecture in combination with the archaeal histone proteins
Externí odkaz:
https://doaj.org/article/77375a604eeb46148a7f2ac69eead533
Autor:
Petr Cejka, Fergus Fettes, Kristina Kasaciunaite, Ralf Seidel, Roopesh Anand, Peter Daldrop, Maryna Levikova
Publikováno v:
The EMBO Journal
EMBO J
EMBO J
DNA double-strand break repair by homologous recombination employs long-range resection of the 5' DNA ends at the break points. In Saccharomyces cerevisiae, this process can be performed by the RecQ helicase Sgs1 and the helicase-nuclease Dna2. Thoug
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::148a6f2e58ec83dff2086a3cb0601f1b
https://doi.org/10.15252/embj.2019101516
https://doi.org/10.15252/embj.2019101516
Autor:
Ralf Seidel, Petr Cejka, Maryna Levikova, Fergus Fettes, Kristina Kasaciunaite, Peter Daldrop
DNA double-strand break repair by homologous recombination employs long-range resection of the 5’ DNA ends at the break points. In Saccharomyces cerevisiae, this process can be performed by the RecQ helicase Sgs1 and the helicase-nuclease Dna2. Tho
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::00ca2cc07c8199e9588d785f74483354
https://doi.org/10.1101/515791
https://doi.org/10.1101/515791
Publikováno v:
Nucleic Acids Research
Nucleic acids research
Nucleic acids research
Replication protein A (RPA) is a single-stranded DNA binding protein, involved in most aspects of eukaryotic DNA metabolism. Here, we study the behavior of RPA on a DNA substrate that mimics a replication fork. Using magnetic tweezers we show that bo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4b1ab0041153a426d9a6c1519b1a0705
http://europepmc.org/articles/PMC4937307
http://europepmc.org/articles/PMC4937307
Publikováno v:
Biophysical Journal. 108:2550-2561
Magnetic tweezers are a wide-spread tool used to study the mechanics and the function of a large variety of biomolecules and biomolecular machines. This tool uses a magnetic particle and a strong magnetic field gradient to apply defined forces to the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::a775911553aa1a435e53947f1d91d652
https://doi.org/10.1016/j.bpj.2015.04.011
https://doi.org/10.1016/j.bpj.2015.04.011
Publikováno v:
RNA Biology
Ribonuclease P RNA requires a sharply kinked RNA helix to make a loop-receptor interaction that creates the binding site for the substrate. In some forms of the ribozyme, this is accomplished by a k-turn, while others have a different element called
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::2e0fe50260c1d78e2306fe1e322097f3
https://doi.org/10.4161/rna.23673
https://doi.org/10.4161/rna.23673
Autor:
David M.J. Lilley, Peter Daldrop
Publikováno v:
RNA. 19:357-364
The k-turn is a widespread structural motif that introduces a tight kink into the helical axis of double-stranded RNA. The adenine bases of consecutive G•A pairs are directed toward the minor groove of the opposing helix, hydrogen bonding in a typi
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0c372ff4acd8e85d4c166d18d116fb74
https://doi.org/10.1261/rna.036657.112
https://doi.org/10.1261/rna.036657.112
Autor:
Sebastian, Wierer, Peter, Daldrop, Misbha, Ud Din Ahmad, Winfried, Boos, Malte, Drescher, Wolfram, Welte, Ralf, Seidel
Publikováno v:
PLoS ONE, Vol 11, Iss 5, p e0156098 (2016)
PLoS ONE
PLoS ONE
In many hyperthermophilic archaea the DNA binding protein TrmBL2 or one of its homologues is abundantly expressed. TrmBL2 is thought to play a significant role in modulating the chromatin architecture in combination with the archaeal histone proteins
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::245e4d45ac837095bcc72c3ea7f2c438
Publikováno v:
RNA. 18:1257-1266
The kink turn (k-turn) is a frequently occurring motif, comprising a bulge followed by G•A and A•G pairs that introduces a sharp axial bend in duplex RNA. Natural k-turn sequences exhibit significant departures from the consensus, including the A
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::08afe04a3a2f2956b8850945dea1428b
https://doi.org/10.1261/rna.032409.112
https://doi.org/10.1261/rna.032409.112
Publikováno v:
Structure(London, England:1993)
Summary The kink turn is a widespread RNA motif that introduces an acute kink into the axis of duplex RNA, typically comprising a bulge followed by a G⋅A and A⋅G pairs. The kinked conformation is stabilized by metal ions, or the binding of protei
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c8a0bfa963429b9f55021c006fb4bf0f