Výsledky vyhledávání - "Perisic, Ognjen"

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Fuels of the Future for Renewable Energy Sources (Ammonia, Biofuels, Hydrogen)

Autor: Mansoori, G. Ali, Agyarko, L. Barnie, Estevez, L. Antonio, Fallahi, Behrooz, Gladyshev, Georgi, Santos, Ronaldo Gonçalves dos, Niaki, Shawn, Perišić, Ognjen, Sillanpää, Mika, Tumba, Kaniki, Yen, Jeffrey

Potential strategies for the development and large-scale application of renewable energy sources aimed at reducing the usage of carbon-based fossil fuels are assessed here, especially in the event of the abandonment of such fuels. The aim is to aid t

Externí odkaz: http://arxiv.org/abs/2102.00439

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Recognition of potential Covid-19 drug treatments through the study of existing protein-drug and protein-protein structures: an analysis of kinetically active residues

Autor: Perišić, Ognjen

We report the results of our study of approved drugs as potential treatments for COVID 19, based on the application of various bioinformatics predictive methods. The drugs studied include chloroquine, ivermectin, remdesivir, sofosbuvir, boceprevir, a

Externí odkaz: http://arxiv.org/abs/2004.10233

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Heterodimer binding scaffolds recognition via the analysis of kinetically hot residues

Autor: Perišić, Ognjen

Physical interactions between proteins are often difficult to decipher. The aim of this paper is to present an algorithm designed to recognize binding patches and supporting structural scaffolds of interacting heterodimer protein chains using the Gau

Externí odkaz: http://arxiv.org/abs/1609.06556

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Contact and first layer residues prediction in protein dimers using the Gaussian Network model with adjustable number of fast modes

Autor: Perišić, Ognjen

Interactions between proteins are hard to decipher. Protein-protein interactions are difficult problem to address because they are not based on differences in charge type like protein-DNA or protein-lipid interactions. In this manuscript we present a

Externí odkaz: http://arxiv.org/abs/1312.7376

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Efficient free energy profile reconstruction using adaptive stochastic perturbation protocols

Autor: Perisic, Ognjen, Lu, Hui

Application of Jarzynski nonequilibrium work relation to free energy calculation is limited by the very slow convergence of the estimate when dissipation is high. We present a novel perturbation protocol able to improve the convergence of Jarzynski e

Externí odkaz: http://arxiv.org/abs/0801.0178

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