Zobrazeno 1 - 10
of 70
pro vyhledávání: '"Per Stenberg"'
Publikováno v:
PLoS Computational Biology, Vol 19, Iss 7, p e1011185 (2023)
Mammalian DNA folds into 3D structures that facilitate and regulate genetic processes such as transcription, DNA repair, and epigenetics. Several insights derive from chromosome capture methods, such as Hi-C, which allow researchers to construct cont
Externí odkaz:
https://doaj.org/article/835bef5d4d264c468dc946084e3e84a1
Publikováno v:
BMC Genomics, Vol 23, Iss 1, Pp 1-16 (2022)
Abstract Background Immortalized cell lines are widely used model systems whose genomes are often highly rearranged and polyploid. However, their genome structure is seldom deciphered and is thus not accounted for during analyses. We therefore used l
Externí odkaz:
https://doaj.org/article/65546c4872424e12b46cba674c8feb9b
Autor:
Björn Brindefalk, Harald Brolin, Melle Säve‐Söderbergh, Edvin Karlsson, David Sundell, Per Wikström, Karin Jacobsson, Jonas Toljander, Per Stenberg, Andreas Sjödin, Rikard Dryselius, Mats Forsman, Jon Ahlinder
Publikováno v:
MicrobiologyOpen, Vol 11, Iss 5, Pp n/a-n/a (2022)
Abstract Background Surface raw water used as a source for drinking water production is a critical resource, sensitive to contamination. We conducted a study on Swedish raw water sources, aiming to identify mutually co‐occurring metacommunities of
Externí odkaz:
https://doaj.org/article/953304807ebe4e54b5ffc032522edef8
Autor:
Edvin Karlsson, Anna-Mia Johansson, Jon Ahlinder, Moa J. Lundkvist, Navinder J. Singh, Tomas Brodin, Mats Forsman, Per Stenberg
Publikováno v:
PeerJ, Vol 8, p e8424 (2020)
Microorganisms are essential constituents of ecosystems. To improve our understanding of how various factors shape microbial diversity and composition in nature it is important to study how microorganisms vary in space and time. Factors shaping micro
Externí odkaz:
https://doaj.org/article/23a5c0d140d4417eae8f6ba6669aac1b
Publikováno v:
Physical Review Research, Vol 3, Iss 1, p 013055 (2021)
Several processes in the cell, such as gene regulation, start when key proteins recognize and bind to short DNA sequences. However, as these sequences can be hundreds of million times shorter than the genome, they are hard to find by simple diffusion
Externí odkaz:
https://doaj.org/article/781fcbd0278b438e8cba0cd07baa5018
Autor:
Moa Hägglund, Stina Bäckman, Anna Macellaro, Petter Lindgren, Emmy Borgmästars, Karin Jacobsson, Rikard Dryselius, Per Stenberg, Andreas Sjödin, Mats Forsman, Jon Ahlinder
Publikováno v:
Frontiers in Microbiology, Vol 9 (2018)
Microbial source tracking (MST) analysis is essential to identifying and mitigating the fecal pollution of water resources. The signature-based MST method uses a library of sequences to identify contaminants based on operational taxonomic units (OTUs
Externí odkaz:
https://doaj.org/article/59fc214f0b5f474fbc39d3d13ca0a7e6
Autor:
Kelvin Yeung, Ann Boija, Edvin Karlsson, Per-Henrik Holmqvist, Yonit Tsatskis, Ilaria Nisoli, Damian Yap, Alireza Lorzadeh, Michelle Moksa, Martin Hirst, Samuel Aparicio, Manolis Fanto, Per Stenberg, Mattias Mannervik, Helen McNeill
Publikováno v:
eLife, Vol 6 (2017)
Mutations in human Atrophin1, a transcriptional corepressor, cause dentatorubral-pallidoluysian atrophy, a neurodegenerative disease. Drosophila Atrophin (Atro) mutants display many phenotypes, including neurodegeneration, segmentation, patterning an
Externí odkaz:
https://doaj.org/article/0bd2f64c752349fd9c79d349b5cff0b5
Autor:
Margarida L A Figueiredo, Maria Kim, Philge Philip, Anders Allgardsson, Per Stenberg, Jan Larsson
Publikováno v:
PLoS Genetics, Vol 10, Iss 12, p e1004865 (2014)
Long non-coding RNAs contribute to dosage compensation in both mammals and Drosophila by inducing changes in the chromatin structure of the X-chromosome. In Drosophila melanogaster, roX1 and roX2 are long non-coding RNAs that together with proteins f
Externí odkaz:
https://doaj.org/article/d8f187d6d8994558af9daeb9db63ee7f
Publikováno v:
PLoS Genetics, Vol 10, Iss 7, p e1004495 (2014)
Polycomb Group (PcG) proteins are epigenetic repressors that control metazoan development and cell differentiation. In Drosophila, PcG proteins form five distinct complexes targeted to genes by Polycomb Response Elements (PREs). Of all PcG complexes
Externí odkaz:
https://doaj.org/article/c79d9a1be2534a3db2c5ad899bdbe10b
Publikováno v:
PLoS Genetics, Vol 8, Iss 6, p e1002769 (2012)
CBP and the related p300 protein are widely used transcriptional co-activators in metazoans that interact with multiple transcription factors. Whether CBP/p300 occupies the genome equally with all factors or preferentially binds together with some fa
Externí odkaz:
https://doaj.org/article/c190130f8aab47d2962b77f6100c5588