Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Paul Saary"'
Autor:
Gulnara Tagirdzhanova, Paul Saary, Ellen S Cameron, Carmen C G Allen, Arkadiy I Garber, David Díaz Escandón, Andrew T Cook, Spencer Goyette, Veera Tuovinen Nogerius, Alfredo Passo, Helmut Mayrhofer, Håkon Holien, Tor Tønsberg, Lisa Y Stein, Robert D Finn, Toby Spribille
Publikováno v:
PLoS Biology, Vol 22, Iss 11, p e3002862 (2024)
In lichen research, metagenomes are increasingly being used for evaluating symbiont composition and metabolic potential, but the overall content and limitations of these metagenomes have not been assessed. We reassembled over 400 publicly available m
Externí odkaz:
https://doaj.org/article/aa08fbd65f7e4388b6cb09d03f634a27
Publikováno v:
Genome Biology, Vol 21, Iss 1, Pp 1-21 (2020)
Abstract Microbial eukaryotes constitute a significant fraction of biodiversity and have recently gained more attention, but the recovery of high-quality metagenomic assembled eukaryotic genomes is limited by the current availability of tools. To hel
Externí odkaz:
https://doaj.org/article/facbd762ef93499fa1996efbe2ae0488
Autor:
Gulnara Tagirdzhanova, Paul Saary, Ellen S. Cameron, Arkadiy I. Garber, David Díaz Escandón, Spencer Goyette, Veera Tuovinen Nogerius, Alfredo Passo, Helmut Mayrhofer, Håkon Holien, Tor Tønsberg, Lisa Y. Stein, Robert D. Finn, Toby Spribille
Lichens are the archetypal symbiosis and the one for which the term was coined. Although application of shotgun sequencing techniques has shown that many lichen symbioses can harbour more symbionts than the canonically recognized fungus and photobion
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::1129e204c89cc27de13df1d2ae3d136b
https://doi.org/10.1101/2023.02.02.524463
https://doi.org/10.1101/2023.02.02.524463
Autor:
Johan van Nes, Moritz Gartlgruber, Rogier Versteeg, Andres Quintero, Frank Westermann, Elena A. Afanasyeva, David T.W. Jones, Elisa M. Wecht, Paul Saary, Ashwini Kumar Sharma, Sina Kreth, Johanna Meder, Daria Doncevic, Carl Herrmann, Umut H. Toprak, Thomas G. P. Grunewald, Stefan M. Pfister, Young-Gyu Park, Jan Koster, Naveed Ishaque, Selina Jansky, Daniel Dreidax, Kai-Oliver Henrich
Publikováno v:
Nature Cancer, 2(1), 114-128. Nature Research
Half of the children diagnosed with neuroblastoma (NB) have high-risk disease, disproportionately contributing to overall childhood cancer-related deaths. In addition to recurrent gene mutations, there is increasing evidence supporting the role of ep
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::690e84dc9638842aa81089f50fe1b78f
http://www.scopus.com/inward/record.url?scp=85097226348&partnerID=8YFLogxK
http://www.scopus.com/inward/record.url?scp=85097226348&partnerID=8YFLogxK
Shotgun metagenomics provides access to genetic information of microbes in a culture-independent manner. The recovery of metagenome assembled genomes (MAGs) of these organisms enables in-depth analysis of the functional potential of these, often elus
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c4398dfdcb1bcd858e162edd738d557a
https://doi.org/10.21203/rs.3.rs-1441815/v1
https://doi.org/10.21203/rs.3.rs-1441815/v1
Autor:
David Díaz-Escandón, Gulnara Tagirdzhanova, Paul Saary, Robert D. Finn, Toby Spribille, D. Wade Abbott, Jeffrey P Tingley
Publikováno v:
Genome Biology and Evolution. 13
Basidiomycete yeasts have recently been reported as stably associated secondary fungal symbionts of many lichens, but their role in the symbiosis remains unknown. Attempts to sequence their genomes have been hampered both by the inability to culture
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::21dde19a826659641ac36ddc9cd91c52
https://doi.org/10.1093/gbe/evab129
https://doi.org/10.1093/gbe/evab129
Autor:
Gulnara Tagirdzhanova, Paul Saary, Jeffrey P Tingley, David Díaz-Escandón, D Wade Abbott, Robert D Finn, Toby Spribille
Publikováno v:
Genome Biology and Evolution
Basidiomycete yeasts have recently been reported as stably associated secondary fungal symbionts of many lichens, but their role in the symbiosis remains unknown. Attempts to sequence their genomes have been hampered both by the inability to culture
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::b3e68aabbb45091f46380f289fc8183c
https://pubmed.ncbi.nlm.nih.gov/34196707
https://pubmed.ncbi.nlm.nih.gov/34196707
Autor:
Sara, Saheb Kashaf, Diana M, Proctor, Clay, Deming, Paul, Saary, Martin, Hölzer, Monica E, Taylor, Heidi H, Kong, Julia A, Segre, Alexandre, Almeida, Meg, Vemulapalli
Publikováno v:
Nat Microbiol
Human skin functions as a physical barrier to foreign pathogen invasion and houses numerous commensals. Shifts in the human skin microbiome have been associated with conditions ranging from acne to atopic dermatitis. Previous metagenomic investigatio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d83662ee4c4bc7229511568caf8e84df
https://pubmed.ncbi.nlm.nih.gov/34952941
https://pubmed.ncbi.nlm.nih.gov/34952941
Eukaryotes make up a large fraction of microbial biodiversity. However, the field of metagenomics has been heavily biased towards the study of just the prokaryotic fraction. This focus has driven the necessary methodological developments to enable th
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8ab4e07856b435c61c1ebb0012c7addf
Autor:
Anna Jauch, Marcel Waschow, Christian Dietz, Paul Saary, Carl Herrmann, Daniel Dreidax, Roland Eils, Qi Wang, Lorenz Maier, Martin R. Sprick, Sabine Aschenbrenner, Stephan M Tirier, Ilse Chudoba, Christian Conrad, Katharina Jechow, Corinna Klein, Brigitte Schoell
Abnormal karyotypes, namely aneuploidy, can be detected in nearly all cancer entities at different grades. The impact of these altering mutations on epigenetic regulation, especially on promoter-enhancer interactions are not well understood. Here, we
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::adfd2c88e791ec77faaff0349fbd09df