Interspecies co-expression analysis of lateral root development using inducible systems in rice, Medicago, and Arabidopsis.

Autor: Motte H; Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052, Ghent, Belgium.; VIB Center for Plant Systems Biology, 9052, Ghent, Belgium., Parizot B; Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052, Ghent, Belgium.; VIB Center for Plant Systems Biology, 9052, Ghent, Belgium., Xuan W; State Key Laboratory of Crop Genetics and Germplasm Enhancement and MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, 210095, China., Chen Q; Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052, Ghent, Belgium.; VIB Center for Plant Systems Biology, 9052, Ghent, Belgium., Maere S; Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052, Ghent, Belgium.; VIB Center for Plant Systems Biology, 9052, Ghent, Belgium., Bensmihen S; INRAE, CNRS, LIPME, Université de Toulouse, F-31326, Castanet-Tolosan, France., Beeckman T; Department of Plant Biotechnology and Bioinformatics, Ghent University, 9052, Ghent, Belgium.; VIB Center for Plant Systems Biology, 9052, Ghent, Belgium.

Publikováno v: The Plant journal : for cell and molecular biology [Plant J] 2023 Nov; Vol. 116 (4), pp. 1052-1063. Date of Electronic Publication: 2023 Oct 04.

Rice plants respond to ammonium stress by adopting a helical root growth pattern.

Autor: Jia L; State Key Laboratory of Crop Genetics and Germplasm Enhancement and MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, 210095, China., Xie Y; State Key Laboratory of Crop Genetics and Germplasm Enhancement and MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, 210095, China., Wang Z; State Key Laboratory of Crop Genetics and Germplasm Enhancement and MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, 210095, China., Luo L; State Key Laboratory of Crop Genetics and Germplasm Enhancement and MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, 210095, China., Zhang C; State Key Laboratory of Crop Genetics and Germplasm Enhancement and MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, 210095, China., Pélissier PM; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, Ghent, B-9052, Belgium.; VIB-UGent Center for Plant Systems Biology, Technologiepark 71, Ghent, B-9052, Belgium., Parizot B; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, Ghent, B-9052, Belgium.; VIB-UGent Center for Plant Systems Biology, Technologiepark 71, Ghent, B-9052, Belgium., Qi W; Institute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing, 210014, China., Zhang J; State Key Laboratory of Plant Physiology and Biochemistry, College of Biological Sciences, China Agricultural University, Beijing, 100193, China., Hu Z; Key Laboratory of Plant Stress Biology, School of Life Sciences, Henan University, Kaifeng, 475004, China., Motte H; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, Ghent, B-9052, Belgium.; VIB-UGent Center for Plant Systems Biology, Technologiepark 71, Ghent, B-9052, Belgium., Luo L; State Key Laboratory of Crop Genetics and Germplasm Enhancement and MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, 210095, China., Xu G; State Key Laboratory of Crop Genetics and Germplasm Enhancement and MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, 210095, China., Beeckman T; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, Ghent, B-9052, Belgium.; VIB-UGent Center for Plant Systems Biology, Technologiepark 71, Ghent, B-9052, Belgium., Xuan W; State Key Laboratory of Crop Genetics and Germplasm Enhancement and MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River, Nanjing Agricultural University, Nanjing, 210095, China.

Publikováno v: The Plant journal : for cell and molecular biology [Plant J] 2020 Nov; Vol. 104 (4), pp. 1023-1037. Date of Electronic Publication: 2020 Sep 22.

CROWN ROOTLESS1 binds DNA with a relaxed specificity and activates OsROP and OsbHLH044 genes involved in crown root formation in rice.

Autor: Gonin M; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Jeong K; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Coudert Y; Laboratoire Reproduction et Développement des Plantes, Université de Lyon, ENS de Lyon, UCB Lyon 1, CNRS, INRAE, INRIA, Lyon, 69007, France., Lavarenne J; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Hoang GT; National Key Laboratory for Plant Cell Biotechnology, LMI RICE2, Agricultural Genetic Institute, 11300, Hanoi, Vietnam., Bes M; CIRAD, UMR AGAP, F-34398, Montpellier, France.; UMR AGAP, Université de Montpellier, CIRAD, INRA, Montpellier SupAgro, Montpellier, France., To HTM; University of Science and Technology of Hanoi, LMIRICE2, Vietnam Academy of Science and Technology, 11300, Hanoi, Vietnam., Thiaw MN; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Do TV; National Key Laboratory for Plant Cell Biotechnology, LMI RICE2, Agricultural Genetic Institute, 11300, Hanoi, Vietnam., Moukouanga D; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Guyomarc'h S; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Bellande K; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Brossier JR; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Parizot B; Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.; VIB Center for Plant Systems Biology, 9052, Ghent, Belgium., Nguyen HT; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Beeckman T; Department of Plant Biotechnology and Bioinformatics, Ghent University, B-9052, Ghent, Belgium.; VIB Center for Plant Systems Biology, 9052, Ghent, Belgium., Bergougnoux V; Czech Advanced Technology and Research Institute, Centre of Region Haná for Biotechnological and Agricultural Research, Palacký University Olomouc, Olomouc, Czech Republic., Rouster J; Limagrain Field Seeds, Traits and Technologies, Groupe Limagrain-Centre de Recherche, Route d'Ennezat, Chappes, France., Sallaud C; Limagrain Field Seeds, Traits and Technologies, Groupe Limagrain-Centre de Recherche, Route d'Ennezat, Chappes, France., Laplaze L; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Champion A; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France., Gantet P; UMR DIADE, Université de Montpellier, IRD, CIRAD, 911 Avenue Agropolis, 34394, Montpellier cedex 5, France.; Czech Advanced Technology and Research Institute, Centre of Region Haná for Biotechnological and Agricultural Research, Palacký University Olomouc, Olomouc, Czech Republic.

Publikováno v: The Plant journal : for cell and molecular biology [Plant J] 2022 Jul; Vol. 111 (2), pp. 546-566. Date of Electronic Publication: 2022 Jul 09.

Two phylogenetically unrelated peptide-receptor modules jointly regulate lateral root initiation via a partially shared signaling pathway in Arabidopsis thaliana.

Autor: Jourquin J; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, 9052, Belgium.; Center for Plant Systems Biology, VIB-UGent, Ghent, 9052, Belgium., Fernandez AI; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, 9052, Belgium.; Center for Plant Systems Biology, VIB-UGent, Ghent, 9052, Belgium., Parizot B; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, 9052, Belgium.; Center for Plant Systems Biology, VIB-UGent, Ghent, 9052, Belgium., Xu K; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, 9052, Belgium.; Center for Plant Systems Biology, VIB-UGent, Ghent, 9052, Belgium., Grunewald W; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, 9052, Belgium.; Center for Plant Systems Biology, VIB-UGent, Ghent, 9052, Belgium., Mamiya A; Department of Biology, Graduate School of Science, Kobe University, Kobe, 657-8501, Japan., Fukaki H; Department of Biology, Graduate School of Science, Kobe University, Kobe, 657-8501, Japan., Beeckman T; Department of Plant Biotechnology and Bioinformatics, Ghent University, Ghent, 9052, Belgium.; Center for Plant Systems Biology, VIB-UGent, Ghent, 9052, Belgium.

Publikováno v: The New phytologist [New Phytol] 2022 Feb; Vol. 233 (4), pp. 1780-1796. Date of Electronic Publication: 2022 Jan 03.

Periodic root branching is influenced by light through an HY1-HY5-auxin pathway.

Autor: Duan X; College of Life Sciences, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052 Ghent, Belgium; VIB-UGent Center for Plant Systems Biology, Technologiepark 71, B-9052 Ghent, Belgium., Xu S; Institute of Botany, Jiangsu Province and Chinese Academy of Sciences, Nanjing 210014, China., Xie Y; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052 Ghent, Belgium; VIB-UGent Center for Plant Systems Biology, Technologiepark 71, B-9052 Ghent, Belgium; MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River and State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China., Li L; MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River and State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China., Qi W; Institute of Agricultural Resources and Environment, Jiangsu Academy of Agricultural Sciences, Nanjing 210014, China., Parizot B; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052 Ghent, Belgium; VIB-UGent Center for Plant Systems Biology, Technologiepark 71, B-9052 Ghent, Belgium., Zhang Y; Laboratory of Medicinal Plant, Institute of Basic Medical Sciences, School of Basic Medicine, Biomedical Research Institute, Hubei Key Laboratory of Wudang Local Chinese Medicine Research, Hubei Key Laboratory of Embryonic Stem Cell Research, Hubei University of Medicine, Shiyan, China., Chen T; School of Food and Biological Engineering, Hefei University of Technology, Hefei, Anhui 230009, PR China., Han Y; School of Food and Biological Engineering, Hefei University of Technology, Hefei, Anhui 230009, PR China., Van Breusegem F; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052 Ghent, Belgium; VIB-UGent Center for Plant Systems Biology, Technologiepark 71, B-9052 Ghent, Belgium., Beeckman T; Department of Plant Biotechnology and Bioinformatics, Ghent University, Technologiepark 71, B-9052 Ghent, Belgium; VIB-UGent Center for Plant Systems Biology, Technologiepark 71, B-9052 Ghent, Belgium., Shen W; College of Life Sciences, State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China. Electronic address: wbshenh@njau.edu.cn., Xuan W; MOA Key Laboratory of Plant Nutrition and Fertilization in Lower-Middle Reaches of the Yangtze River and State Key Laboratory of Crop Genetics and Germplasm Enhancement, Nanjing Agricultural University, Nanjing 210095, China. Electronic address: wexua@njau.edu.cn.

Publikováno v: Current biology : CB [Curr Biol] 2021 Sep 13; Vol. 31 (17), pp. 3834-3847.e5. Date of Electronic Publication: 2021 Jul 19.