Zobrazeno 1 - 10
of 29
pro vyhledávání: '"Palitha Dharmawardhana"'
Autor:
Sergei A Filichkin, Ghislain Breton, Henry D Priest, Palitha Dharmawardhana, Pankaj Jaiswal, Samuel E Fox, Todd P Michael, Joanne Chory, Steve A Kay, Todd C Mockler
Publikováno v:
PLoS ONE, Vol 6, Iss 6, p e16907 (2011)
Circadian clocks provide an adaptive advantage through anticipation of daily and seasonal environmental changes. In plants, the central clock oscillator is regulated by several interlocking feedback loops. It was shown that a substantial proportion o
Externí odkaz:
https://doaj.org/article/557fbc297da64881af77108d5bf3f3dd
Autor:
Sergei A. Filichkin, Asa Ben-Hur, Sunil Kumar Singh, Anireddy S. N. Reddy, Pankaj Jaiswal, Christopher M. Sullivan, Palitha Dharmawardhana, Michael Hamilton
Publikováno v:
Frontiers in Plant Science
Frontiers in Plant Science, Vol 9 (2018)
Frontiers in Plant Science, Vol 9 (2018)
Abiotic stresses affect plant physiology, development, growth, and alter pre-mRNA splicing. Western poplar is a model woody tree and a potential bioenergy feedstock. To investigate the extent of stress-regulated alternative splicing (AS), we conducte
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5e2148535b1e8681e0f34ea784749eee
https://doi.org/10.3389/fpls.2018.00005
https://doi.org/10.3389/fpls.2018.00005
Autor:
Marcio Alves-Ferreira, Steven H. Strauss, Pankaj Jaiswal, Sushma Naithani, Amy L. Klocko, Alexander Andrew Myburg, Elisson Romanel, Charles A. Hefer, James Wesley-Smith, Vindhya Amarasinghe, Rebecca C. Jones, Kelly J. Vining, Palitha Dharmawardhana, Luke Solomon, Martin Ranik
Publikováno v:
New Phytologist. 206:1406-1422
As a step toward functional annotation of genes required for floral initiation and development within the Eucalyptus genome, we used short read sequencing to analyze transcriptomes of floral buds from early and late developmental stages, and compared
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::01f063f23ff05236555a327d06cdb80e
https://doi.org/10.1111/nph.13077
https://doi.org/10.1111/nph.13077
Autor:
Sunita Kumari, Vindhya Amarasinghe, Pankaj Jaiswal, Andrew Olson, Brandon Walts, Sushma Naithani, Paul J. Kersey, Joshua C. Stein, Daniel M. Staines, Marcela K. Monaco, Guanming Wu, Arnaud Kerhornou, Justin Preece, Palitha Dharmawardhana, Peter D'Eustachio, James Thomason, Dan Bolser, Yinping Jiao, David Croft, Lincoln D. Stein, Ken Youens-Clark, Robin Haw, Shiran Pasternak, Zhenyuan Lu, Sharon Wei, Doreen Ware
Publikováno v:
Nucleic Acids Research
Europe PubMed Central
Europe PubMed Central
Gramene (http://www.gramene.org) is a curated online resource for comparative functional genomics in crops and model plant species, currently hosting 27 fully and 10 partially sequenced reference genomes in its build number 38. Its strength derives f
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::443215c2b2b5c12f6bf894fbbe557124
http://europepmc.org/articles/PMC3964986
http://europepmc.org/articles/PMC3964986
Autor:
Antonio Fabregat, Maria Keays, Lincoln D. Stein, Peter D'Eustachio, Palitha Dharmawardhana, Parul Gupta, Joel Weiser, Pankaj Jaiswal, Alfonso Muñoz-Pomer Fuentes, Guanming Wu, Sushma Naithani, Justin Elser, Justin Preece, Vindhya Amarasinghe, Robert Petryszak, Doreen Ware
Publikováno v:
Nucleic Acids Research
Plant Reactome (http://plantreactome.gramene.org/) is a free, open-source, curated plant pathway database portal, provided as part of the Gramene project. The database provides intuitive bioinformatics tools for the visualization, analysis and interp
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::eb4146cbb521497e77d6f52272fcbb5f
https://pubmed.ncbi.nlm.nih.gov/27799469
https://pubmed.ncbi.nlm.nih.gov/27799469
Contrasting patterns of evolution following whole genome versus tandem duplication events in Populus
Autor:
Palitha Dharmawardhana, Eli Rodgers-Melnick, Steven H. Strauss, Amy M. Brunner, Oswald Crasta, Shrinivasrao P. Mane, Stephen P. DiFazio, Gancho T. Slavov
Publikováno v:
Genome Research. 22:95-105
Comparative analysis of multiple angiosperm genomes has implicated gene duplication in the expansion and diversification of many gene families. However, empirical data and theory suggest that whole-genome and small-scale duplication events differ wit
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::038f969be9418a05b2d9e8cbededcc3f
https://doi.org/10.1101/gr.125146.111
https://doi.org/10.1101/gr.125146.111
Autor:
Renee S. Arias, Steven H. Strauss, Victor Busov, Katherine Han, Cathleen Ma, Palitha Dharmawardhana
Publikováno v:
Plant Biotechnology Journal. 9:162-178
Summary We studied the effects on plant growth and from insertion of five cisgenes that encode proteins involved in gibberellin metabolism or signalling. Intact genomic cop- ies of PtGA20ox7, PtGA2ox2,Pt RGL1_1, PtRGL1_2 and PtGAI1 genes from the gen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::81dd6f934f5f3d6ef3eea30a813d9aea
https://doi.org/10.1111/j.1467-7652.2010.00537.x
https://doi.org/10.1111/j.1467-7652.2010.00537.x
Autor:
Doreen Ware, William Spooner, Ken Youens-Clark, Sharon Wei, Liya Ren, Paul J. Kersey, Jerry Lu, Joshua C. Stein, Palitha Dharmawardhana, Pankaj Jaiswal, Terry M. Casstevens, A. S. Karthikeyan, Paul S. Derwent, Genevieve DeClerck, Charles Chen, Edward S. Buckler, James Thomason, Susan R. McCouch
Publikováno v:
Nucleic Acids Research
Now in its 10th year, the Gramene database (http://www.gramene.org) has grown from its primary focus on rice, the first fully-sequenced grass genome, to become a resource for major model and crop plants including Arabidopsis, Brachypodium, maize, sor
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::322be9f6264558aa30a9dbb1eeaa7c36
http://europepmc.org/articles/PMC3013721
http://europepmc.org/articles/PMC3013721
Publikováno v:
Acta Horticulturae. :43-47
With the available genomic sequence and other experimental attributes, poplar has emerged as a leading candidate to study traits specific to woody perennial plants. Genomic and molecular knowledge gained from studies related to flowering, stem develo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::d10d8a6e0c19f7a861dc6e3dd6ee1622
https://doi.org/10.17660/actahortic.2010.859.3
https://doi.org/10.17660/actahortic.2010.859.3
Publikováno v:
Acta Horticulturae. :31-41
The goal of a novel model plant genomics resource database is to provide a community resource that allows researchers to build their research models by making use of data derived from one or more approaches, for example the forward and reverse geneti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::18a8f3e6d671e07b45e295f9f49c2b6e
https://doi.org/10.17660/actahortic.2010.859.2
https://doi.org/10.17660/actahortic.2010.859.2