Library Preparation for small RNA sequencing using 4N adapters: In house 4N Protocol A

Autor: Roger P. Alexander, MD Giraldez, RM Spengler, A Etheridge, PM Godoy, AJ Barczak, S Srinivasan, PL De Hoff, K Tanriverdi, A Courtright, S Lu, J Khoory, R Rubio, D Baxter, TAP Driedonks, HPJ Buermans, ENM Nolte-t Hoen, H Jiang, K Wang, I Ghiran, Y Wang, K Van Keuren-Jensen, JE Freedman, PG Woodruff, LC Laurent, DJ Erle, DJ Galas, M Tewari

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::61ebc7be83727f41e49cacb8f2e56252
https://escholarship.org/uc/item/2qw4d7mn

Library Preparation for small RNA sequencing using 4N adapters: In house 4N Protocol B

Autor: Roger P. Alexander, MD Giraldez, RM Spengler, A Etheridge, PM Godoy, AJ Barczak, S Srinivasan, PL De Hoff, K Tanriverdi, A Courtright, S Lu, J Khoory, R Rubio, D Baxter, TAP Driedonks, HPJ Buermans, ENM Nolte-t Hoen, H Jiang, K Wang, I Ghiran, Y Wang, K Van Keuren-Jensen, JE Freedman, PG Woodruff, LC Laurent, DJ Erle, DJ Galas, M Tewari

Publikováno v: Protocol Exchange.

Author(s): Alexander, Roger P; Giraldez, MD; Spengler, RM; Etheridge, A; Godoy, PM; Barczak, AJ; Srinivasan, S; De Hoff, PL; Tanriverdi, K; Courtright, A; Lu, S; Khoory, J; Rubio, R; Baxter, D; Driedonks, TAP; Buermans, HPJ; Nolte-t Hoen, ENM; Jiang,

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d17003bf2e249c61ab0ee5fdb764602a
https://doi.org/10.1038/protex.2018.050

Comprehensive multi-center assessment of small RNA-seq methods for quantitative miRNA profiling.

Autor: Giraldez MD; Department of Internal Medicine, Hematology/Oncology Division, University of Michigan, Ann Arbor, Michigan, USA., Spengler RM; Department of Internal Medicine, Hematology/Oncology Division, University of Michigan, Ann Arbor, Michigan, USA., Etheridge A; Pacific Northwest Research Institute, Seattle, Washington, USA., Godoy PM; Lung Biology Center, Department of Medicine, University of California San Francisco, San Francisco, California, USA., Barczak AJ; Lung Biology Center, Department of Medicine, University of California San Francisco, San Francisco, California, USA., Srinivasan S; Department of Obstetrics, Gynecology, and Reproductive Sciences and Sanford Consortium for Regenerative Medicine, University of California, San Diego, La Jolla, California, USA., De Hoff PL; Department of Obstetrics, Gynecology, and Reproductive Sciences and Sanford Consortium for Regenerative Medicine, University of California, San Diego, La Jolla, California, USA., Tanriverdi K; Department of Medicine, Division of Cardiovascular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, USA., Courtright A; Neurogenomics, The Translational Genomics Research Institute (TGen), Phoenix, Arizona, USA., Lu S; Department of Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, USA., Khoory J; Department of Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, USA., Rubio R; Center for Cancer Computational Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA., Baxter D; Institute for Systems Biology, Seattle, Washington, USA., Driedonks TAP; Department of Biochemistry & Cell Biology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, the Netherlands., Buermans HPJ; Leiden Genome Technology Center, Department of Human Genetics, Leiden University Medical Center, Leiden, the Netherlands., Nolte-'t Hoen ENM; Department of Biochemistry & Cell Biology, Faculty of Veterinary Medicine, Utrecht University, Utrecht, the Netherlands., Jiang H; Center for Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, USA.; Department of Biostatistics, University of Michigan, Ann Arbor, Michigan, USA., Wang K; Institute for Systems Biology, Seattle, Washington, USA., Ghiran I; Department of Medicine, Beth Israel Deaconess Medical Center, Harvard Medical School, Boston, Massachusetts, USA., Wang YE; Center for Cancer Computational Biology, Dana-Farber Cancer Institute, Boston, Massachusetts, USA., Van Keuren-Jensen K; Neurogenomics, The Translational Genomics Research Institute (TGen), Phoenix, Arizona, USA., Freedman JE; Department of Medicine, Division of Cardiovascular Medicine, University of Massachusetts Medical School, Worcester, Massachusetts, USA., Woodruff PG; Cardiovascular Research Institute and the Department of Medicine, Division of Pulmonary, Critical Care, Sleep, and Allergy, University of California San Francisco, San Francisco, California, USA., Laurent LC; Department of Obstetrics, Gynecology, and Reproductive Sciences and Sanford Consortium for Regenerative Medicine, University of California, San Diego, La Jolla, California, USA., Erle DJ; Lung Biology Center, Department of Medicine, University of California San Francisco, San Francisco, California, USA., Galas DJ; Pacific Northwest Research Institute, Seattle, Washington, USA., Tewari M; Department of Internal Medicine, Hematology/Oncology Division, University of Michigan, Ann Arbor, Michigan, USA.; Center for Computational Medicine and Bioinformatics, University of Michigan, Ann Arbor, Michigan, USA.; Department of Biomedical Engineering, University of Michigan, Ann Arbor, Michigan, USA.; Biointerfaces Institute, University of Michigan, Ann Arbor, Michigan, USA.

Publikováno v: Nature biotechnology [Nat Biotechnol] 2018 Sep; Vol. 36 (8), pp. 746-757. Date of Electronic Publication: 2018 Jul 16.

Species and population level molecular profiling reveals cryptic recombination and emergent asymmetry in the dimorphic mating locus of C. reinhardtii.

Autor: De Hoff PL; The Salk Institute for Biological Studies, La Jolla, California, United States of America., Ferris P, Olson BJ, Miyagi A, Geng S, Umen JG

Publikováno v: PLoS genetics [PLoS Genet] 2013 Aug; Vol. 9 (8), pp. e1003724. Date of Electronic Publication: 2013 Aug 29.

Plant lectins: the ties that bind in root symbiosis and plant defense.

Autor: De Hoff PL; Department of Molecular, Cell and Developmental Biology, University of California, Los Angeles, CA 90095, USA., Brill LM, Hirsch AM

Publikováno v: Molecular genetics and genomics : MGG [Mol Genet Genomics] 2009 Jul; Vol. 282 (1), pp. 1-15. Date of Electronic Publication: 2009 Jun 02.