A genome-wide association study using a Vietnamese landrace panel of rice (Oryza sativa) reveals new QTLs controlling panicle morphological traits

Autor: TA, Kim Nhung, KHONG, Ngan Giang, HA, Thi Loan, NGUYEN, Dieu Thu, MAI, Duc Chung, HOANG, Thi Giang, PHUNG, Thi Phuong Nhung, BOURRIE, Isabelle, COURTOIS, Brigitte, TRAN, Thi Thu Hoai, DINH, Bach Yen, LA, Tuan Nghia, DO, Nang Vinh, LEBRUN, Michel, GANTET, Pascal, JOUANNIC, Stefan

Publikováno v: BMC Plant Biology
BMC Plant Biology, BioMed Central, 2018, 18 (1), pp.282. ⟨10.1186/s12870-018-1504-1⟩
BMC Plant Biology, Vol 18, Iss 1, Pp 1-15 (2018)
BMC Plant Biology, 2018, 18 (1), pp.282. ⟨10.1186/s12870-018-1504-1⟩
BMC Plant Biology (18), . (2018)

Context Yield improvement is an important issue for rice breeding. Panicle architecture is one of the key components of rice yield and exhibits a large diversity. To identify the morphological and genetic determinants of panicle architecture, we perf

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=pmid_dedup__::f25b8c4bdd949da353c30dd2454cc6b5
https://hal.inrae.fr/hal-02621289

Additional File 4

Autor: TA, Kim, KHONG, Ngan Giang, HA, Thi, NGUYEN, Dieu Thu, MAI, Duc Chung, HOANG, Thi Giang, PHUNG, Thi Phuong Nhung, BOURRIE, Isabelle, COURTOIS, Brigitte, TRAN, Thi Thu Hoai, DINH, Bach Yen, LA, Tuan, DO, Nang, LEBRUN, Michel, GANTET, Pascal, JOUANNIC, Stefan

Figure S3. Correlation between SpN and PBN traits in 2014 and 2015. In grey and orange are values for 2014 and 2015, respectively. The right panel indicates the value density for the two traits in 2014 (grey) and 2015 (orange). SpN: spikelet number.

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::9fcf9ffd1a58ad67d44ddf5dcbdd57f0

Additional File 3

Autor: TA, Kim, KHONG, Ngan Giang, HA, Thi, NGUYEN, Dieu Thu, MAI, Duc Chung, HOANG, Thi Giang, PHUNG, Thi Phuong Nhung, BOURRIE, Isabelle, COURTOIS, Brigitte, TRAN, Thi Thu Hoai, DINH, Bach Yen, LA, Tuan, DO, Nang, LEBRUN, Michel, GANTET, Pascal, JOUANNIC, Stefan

Figure S2. Correlation plots and PCA in the full panel, indica and japonica subpanels over the two years including flowering time (FT), plant height (PH), tiller number (TN) and efficient tiller number (eTN). (a) Correlation plots of the full panel i

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::bd6a613f00f5381ce5ec77cfd86ed050

A genome-wide association study using a Vietnamese landrace panel of rice (Oryza sativa) reveals new QTLs controlling panicle morphological traits.

Autor: Ta KN; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam.; Present address: Plant Genetics Laboratory, National Institute of Genetics, Mishima, Japan., Khong NG; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam.; Present address: Department of Molecular Biology, Palacký University, Olomouc, Czech Republic., Ha TL; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam., Nguyen DT; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam., Mai DC; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam., Hoang TG; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam., Phung TPN; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam., Bourrie I; UMR DIADE, University of Montpellier, IRD, Montpellier, France., Courtois B; CIRAD, UMR AGAP, University of Montpellier, INRA, Montpellier, France., Tran TTH; Plant Resource Center, Hanoi, Vietnam., Dinh BY; Plant Resource Center, Hanoi, Vietnam., LA TN; Plant Resource Center, Hanoi, Vietnam., DO NV; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam., Lebrun M; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam.; UMR LSTM, University of Montpellier, CIRAD, IRD, Montpellier, France., Gantet P; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam.; UMR DIADE, University of Montpellier, IRD, Montpellier, France., Jouannic S; LMI RICE, University of Montpellier, IRD, CIRAD, USTH, National Key Laboratory for Plant Cell Biotechnology, Agronomical Genetics Institute, Hanoi, Vietnam. stephane.jouannic@ird.fr.; UMR DIADE, University of Montpellier, IRD, Montpellier, France. stephane.jouannic@ird.fr.

Publikováno v: BMC plant biology [BMC Plant Biol] 2018 Nov 14; Vol. 18 (1), pp. 282. Date of Electronic Publication: 2018 Nov 14.