Zobrazeno 1 - 5
of 5
pro vyhledávání: '"P. V. Phaneuf"'
Publikováno v:
mSystems, Vol 9, Iss 7 (2024)
ABSTRACT Strains across the Lactobacillaceae family form the basis for a trillion-dollar industry. Our understanding of the genomic basis for their key traits is fragmented, however, including the metabolism that is foundational to their industrial u
Externí odkaz:
https://doaj.org/article/80bab6fb28754a78bb456bcdf19a30db
Autor:
Kevin Rychel, Justin Tan, Arjun Patel, Cameron Lamoureux, Ying Hefner, Richard Szubin, Josefin Johnsen, Elsayed Tharwat Tolba Mohamed, Patrick V. Phaneuf, Amitesh Anand, Connor A. Olson, Joon Ho Park, Anand V. Sastry, Laurence Yang, Adam M. Feist, Bernhard O. Palsson
Publikováno v:
Cell Reports, Vol 42, Iss 9, Pp 113105- (2023)
Summary: Relationships between the genome, transcriptome, and metabolome underlie all evolved phenotypes. However, it has proved difficult to elucidate these relationships because of the high number of variables measured. A recently developed data an
Externí odkaz:
https://doaj.org/article/3fa5f4f1b24a41dda13d125aac6d22b6
Autor:
Amitesh Anand, Arjun Patel, Ke Chen, Connor A. Olson, Patrick V. Phaneuf, Cameron Lamoureux, Ying Hefner, Richard Szubin, Adam M. Feist, Bernhard O. Palsson
Publikováno v:
Nature Communications, Vol 13, Iss 1, Pp 1-9 (2022)
The bacterial respiratory electron transport system (ETS) is branched to allow condition-specific modulation of energy metabolism. Here the authors examine the systems level properties of aerobic electron transport system using adaptive laboratory ev
Externí odkaz:
https://doaj.org/article/2a048520a218438793dbdfbe86ca7d20
Autor:
Patrick V. Phaneuf, James T. Yurkovich, David Heckmann, Muyao Wu, Troy E. Sandberg, Zachary A. King, Justin Tan, Bernhard O. Palsson, Adam M. Feist
Publikováno v:
BMC Genomics, Vol 21, Iss 1, Pp 1-16 (2020)
Abstract Background Adaptive Laboratory Evolution (ALE) has emerged as an experimental approach to discover mutations that confer phenotypic functions of interest. However, the task of finding and understanding all beneficial mutations of an ALE expe
Externí odkaz:
https://doaj.org/article/65ee2614ecf947cda5b4e6540de31159
Autor:
Colton J Lloyd, Zachary A King, Troy E Sandberg, Ying Hefner, Connor A Olson, Patrick V Phaneuf, Edward J O'Brien, Jon G Sanders, Rodolfo A Salido, Karenina Sanders, Caitriona Brennan, Gregory Humphrey, Rob Knight, Adam M Feist
Publikováno v:
PLoS Computational Biology, Vol 15, Iss 3, p e1006213 (2019)
Understanding the fundamental characteristics of microbial communities could have far reaching implications for human health and applied biotechnology. Despite this, much is still unknown regarding the genetic basis and evolutionary strategies underl
Externí odkaz:
https://doaj.org/article/0b08cea9e4384dfd9328432a74685e89