Zobrazeno 1 - 10
of 21
pro vyhledávání: '"P. D. Jagtap"'
Autor:
M. A. Saito, J. K. Saunders, M. R. McIlvin, E. M. Bertrand, J. A. Breier, M. M. Brisbin, S. M. Colston, J. R. Compton, T. J. Griffin, W. J. Hervey, R. L. Hettich, P. D. Jagtap, M. Janech, R. Johnson, R. Keil, H. Kleikamp, D. Leary, L. Martens, J. S. P. McCain, E. Moore, S. Mehta, D. M. Moran, J. Neibauer, B. A. Neely, M. V. Jakuba, J. Johnson, M. Duffy, G. J. Herndl, R. Giannone, R. Mueller, B. L. Nunn, M. Pabst, S. Peters, A. Rajczewski, E. Rowland, B. Searle, T. Van Den Bossche, G. J. Vora, J. R. Waldbauer, H. Zheng, Z. Zhao
Publikováno v:
Biogeosciences, Vol 21, Pp 4889-4908 (2024)
Metaproteomics is an increasingly popular methodology that provides information regarding the metabolic functions of specific microbial taxa and has potential for contributing to ocean ecology and biogeochemical studies. A blinded multi-laboratory in
Externí odkaz:
https://doaj.org/article/bf79b7782bbe4eb8adf50d6e5906b179
Autor:
Valerie C. Schiml, Francesco Delogu, Praveen Kumar, Benoit Kunath, Bérénice Batut, Subina Mehta, James E. Johnson, Björn Grüning, Phillip B. Pope, Pratik D. Jagtap, Timothy J. Griffin, Magnus Ø. Arntzen
Publikováno v:
Environmental Microbiome, Vol 18, Iss 1, Pp 1-13 (2023)
Abstract Background ‘Omics methods have empowered scientists to tackle the complexity of microbial communities on a scale not attainable before. Individually, omics analyses can provide great insight; while combined as “meta-omics”, they enhanc
Externí odkaz:
https://doaj.org/article/5bda6fda2ac74a489dfbe9e3e1b39257
Autor:
Saskia Hiltemann, Helena Rasche, Simon Gladman, Hans-Rudolf Hotz, Delphine Larivière, Daniel Blankenberg, Pratik D Jagtap, Thomas Wollmann, Anthony Bretaudeau, Nadia Goué, Timothy J Griffin, Coline Royaux, Yvan Le Bras, Subina Mehta, Anna Syme, Frederik Coppens, Bert Droesbeke, Nicola Soranzo, Wendi Bacon, Fotis Psomopoulos, Cristóbal Gallardo-Alba, John Davis, Melanie Christine Föll, Matthias Fahrner, Maria A Doyle, Beatriz Serrano-Solano, Anne Claire Fouilloux, Peter van Heusden, Wolfgang Maier, Dave Clements, Florian Heyl, Galaxy Training Network, Björn Grüning, Bérénice Batut
Publikováno v:
PLoS Computational Biology, Vol 19, Iss 1, p e1010752 (2023)
There is an ongoing explosion of scientific datasets being generated, brought on by recent technological advances in many areas of the natural sciences. As a result, the life sciences have become increasingly computational in nature, and bioinformati
Externí odkaz:
https://doaj.org/article/418bd96910b049ef9a470281072747d4
Autor:
Tim Van Den Bossche, Magnus Ø. Arntzen, Dörte Becher, Dirk Benndorf, Vincent G. H. Eijsink, Céline Henry, Pratik D. Jagtap, Nico Jehmlich, Catherine Juste, Benoit J. Kunath, Bart Mesuere, Thilo Muth, Phillip B. Pope, Jana Seifert, Alessandro Tanca, Sergio Uzzau, Paul Wilmes, Robert L. Hettich, Jean Armengaud
Publikováno v:
Microbiome, Vol 9, Iss 1, Pp 1-4 (2021)
Abstract Through connecting genomic and metabolic information, metaproteomics is an essential approach for understanding how microbiomes function in space and time. The international metaproteomics community is delighted to announce the launch of the
Externí odkaz:
https://doaj.org/article/ca63e99ef5e44ee6a7debf6b84b6ce6c
Autor:
Subina Mehta, Valdemir M. Carvalho, Andrew T. Rajczewski, Olivier Pible, Björn A. Grüning, James E. Johnson, Reid Wagner, Jean Armengaud, Timothy J. Griffin, Pratik D. Jagtap
Publikováno v:
Viruses, Vol 14, Iss 10, p 2205 (2022)
The Coronavirus disease 2019 (COVID-19) pandemic caused by the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) resulted in a major health crisis worldwide with its continuously emerging new strains, resulting in new viral variants that d
Externí odkaz:
https://doaj.org/article/54b988d980714905b8379386a16a7840
Autor:
Subina Mehta, Marie Crane, Emma Leith, Bérénice Batut, Saskia Hiltemann, Magnus Ø Arntzen, Benoit J. Kunath, Phillip B. Pope, Francesco Delogu, Ray Sajulga, Praveen Kumar, James E. Johnson, Timothy J. Griffin, Pratik D. Jagtap
Publikováno v:
F1000Research, Vol 10 (2021)
The Earth Microbiome Project (EMP) aided in understanding the role of microbial communities and the influence of collective genetic material (the ‘microbiome’) and microbial diversity patterns across the habitats of our planet. With the evolution
Externí odkaz:
https://doaj.org/article/73e663f556a648a1931080c5ee40ac78
Autor:
Andrew T. Rajczewski, Qiyuan Han, Subina Mehta, Praveen Kumar, Pratik D. Jagtap, Charles G. Knutson, James G. Fox, Natalia Y. Tretyakova, Timothy J. Griffin
Publikováno v:
Proteomes, Vol 10, Iss 2, p 11 (2022)
Chronic inflammation of the colon causes genomic and/or transcriptomic events, which can lead to expression of non-canonical protein sequences contributing to oncogenesis. To better understand these mechanisms, Rag2−/−Il10−/− mice were infect
Externí odkaz:
https://doaj.org/article/d30189bf3c9641068ef1e79f1809d6ca
Publikováno v:
The Indian Journal of Agricultural Sciences, Vol 90, Iss 4 (2020)
The sustainable production of acid lime is possible with combined use of irrigation water with fertilizer through micro-irrigation. The integrated use of drip irrigation with fertigation on yield, quality and economy of 14 year-old acid lime (Citrus
Externí odkaz:
https://doaj.org/article/868acce4d9ec41e39b295d742b23ffad
Autor:
Ray Sajulga, Caleb Easterly, Michael Riffle, Bart Mesuere, Thilo Muth, Subina Mehta, Praveen Kumar, James Johnson, Bjoern Andreas Gruening, Henning Schiebenhoefer, Carolin A Kolmeder, Stephan Fuchs, Brook L Nunn, Joel Rudney, Timothy J Griffin, Pratik D Jagtap
Publikováno v:
PLoS ONE, Vol 15, Iss 11, p e0241503 (2020)
To gain a thorough appreciation of microbiome dynamics, researchers characterize the functional relevance of expressed microbial genes or proteins. This can be accomplished through metaproteomics, which characterizes the protein expression of microbi
Externí odkaz:
https://doaj.org/article/9da73087023c4018882f7a4da3170b7c
Autor:
James E. Johnson, Praveen Kumar, Caleb Easterly, Mark Esler, Subina Mehta, Arthur C. Eschenlauer, Adrian D. Hegeman, Pratik D. Jagtap, Timothy J. Griffin
Publikováno v:
F1000Research, Vol 7 (2019)
Galaxy provides an accessible platform where multi-step data analysis workflows integrating disparate software can be run, even by researchers with limited programming expertise. Applications of such sophisticated workflows are many, including those
Externí odkaz:
https://doaj.org/article/604901802b674d0b9dc8eb8308629d96