Zobrazeno 1 - 10
of 22
pro vyhledávání: '"Oxana Pogoutse"'
Publikováno v:
mBio, Vol 15, Iss 7 (2024)
ABSTRACT Microbiomes often benefit plants, conferring resistance to pathogens, improving stress tolerance, or promoting plant growth. As potential plant mutualists, however, microbiomes are not a single organism but a community of species with comple
Externí odkaz:
https://doaj.org/article/75c1567a977743b490148c97b69dfac9
Autor:
Benjamin Weller, Chung-Wen Lin, Oxana Pogoutse, Mayra Sauer, Nora Marin-de la Rosa, Alexandra Strobel, Veronika Young, Jennifer J Knapp, Ashyad Rayhan, Claudia Falter, Dae-Kyum Kim, Frederick P Roth, Pascal Falter-Braun
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 13, Iss 7 (2023)
AbstractThe COVID-19 pandemic has catalyzed unprecedented scientific data and reagent sharing and collaboration, which enabled understanding the virology of the SARS-CoV-2 virus and vaccine development at record speed. The pandemic, however, has also
Externí odkaz:
https://doaj.org/article/22d7da279c7548adb2ca6ba375ae2031
Autor:
Dae-Kyum Kim, Jennifer J. Knapp, Da Kuang, Aditya Chawla, Patricia Cassonnet, Hunsang Lee, Dayag Sheykhkarimli, Payman Samavarchi-Tehrani, Hala Abdouni, Ashyad Rayhan, Roujia Li, Oxana Pogoutse, Étienne Coyaud, Sylvie van der Werf, Caroline Demeret, Anne-Claude Gingras, Mikko Taipale, Brian Raught, Yves Jacob, Frederick P. Roth
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 10, Iss 9, Pp 3399-3402 (2020)
The world is facing a global pandemic of COVID-19 caused by the SARS-CoV-2 coronavirus. Here we describe a collection of codon-optimized coding sequences for SARS-CoV-2 cloned into Gateway-compatible entry vectors, which enable rapid transfer into a
Externí odkaz:
https://doaj.org/article/fb21b6255c194af1b3ff91433376e797
Autor:
Mohan Babu, J Javier Díaz-Mejía, James Vlasblom, Alla Gagarinova, Sadhna Phanse, Chris Graham, Fouad Yousif, Huiming Ding, Xuejian Xiong, Anaies Nazarians-Armavil, Md Alamgir, Mehrab Ali, Oxana Pogoutse, Asaf Pe'er, Roland Arnold, Magali Michaut, John Parkinson, Ashkan Golshani, Chris Whitfield, Shoshana J Wodak, Gabriel Moreno-Hagelsieb, Jack F Greenblatt, Andrew Emili
Publikováno v:
PLoS Genetics, Vol 7, Iss 11, p e1002377 (2011)
As the interface between a microbe and its environment, the bacterial cell envelope has broad biological and clinical significance. While numerous biosynthesis genes and pathways have been identified and studied in isolation, how these intersect func
Externí odkaz:
https://doaj.org/article/267b6741cba6464c9b09fc1d98cbfecc
Autor:
Pingzhao Hu, Sarath Chandra Janga, Mohan Babu, J Javier Díaz-Mejía, Gareth Butland, Wenhong Yang, Oxana Pogoutse, Xinghua Guo, Sadhna Phanse, Peter Wong, Shamanta Chandran, Constantine Christopoulos, Anaies Nazarians-Armavil, Negin Karimi Nasseri, Gabriel Musso, Mehrab Ali, Nazila Nazemof, Veronika Eroukova, Ashkan Golshani, Alberto Paccanaro, Jack F Greenblatt, Gabriel Moreno-Hagelsieb, Andrew Emili
Publikováno v:
PLoS Biology, Vol 7, Iss 4, p e96 (2009)
One-third of the 4,225 protein-coding genes of Escherichia coli K-12 remain functionally unannotated (orphans). Many map to distant clades such as Archaea, suggesting involvement in basic prokaryotic traits, whereas others appear restricted to E. col
Externí odkaz:
https://doaj.org/article/512d2be209f844b598c2040abfcbe06f
A map of binary SARS-CoV-2 protein interactions implicates host immune regulation and ubiquitination
Autor:
Isaiah Hazelwood, Dayag Sheykhkarimli, Jean-Claude Twizere, Michael A. Calderwood, Nishka Kishore, Atina G. Cote, Florent Laval, Pascal Falter-Braun, Luc Willems, Marc Vidal, Benjamin Weller, Ashyad Rayhan, Patricia Cassonnet, Frederick P. Roth, Claudia Falter, Tong Hao, Veronika Young, Melina Altmann, Rothballer Simin, Nora Marín-de la Rosa, Jennifer J. Knapp, Alexandra Strobel, Ramakrishnan Pandiarajan, Caroline Demeret, Kerstin Spirohn, Dave E Hill, Mayra Sauer, Patricia A Rodriguez Coloma, Oxana Pogoutse, Guillaume Dugied, Patrick Schwehn, Roujia Li, Dae-Kyum Kim, Lena Elorduy Vergara, Maria Nguyen, Chung Wen Lin, Bingruo B Liu, Yves Jacob
Publikováno v:
bioRxiv
Key steps in viral propagation, immune suppression, and pathology are mediated by direct, binary, physical interactions between viral and host proteins. To understand the biology of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infecti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::25939c663edb400823c780751a7ab2da
https://hal-pasteur.archives-ouvertes.fr/pasteur-03209762
https://hal-pasteur.archives-ouvertes.fr/pasteur-03209762
Autor:
Hunsang Lee, Dayag Sheykhkarimli, Caroline Demeret, Payman Samavarchi-Tehrani, Hala Abdouni, Mikko Taipale, Patricia Cassonnet, Sylvie van der Werf, Roujia Li, Oxana Pogoutse, Anne-Claude Gingras, Yves Jacob, Brian Raught, Jennifer J. Knapp, Da Kuang, Ashyad Rayhan, Etienne Coyaud, Dae-Kyum Kim, Frederick P. Roth, Aditya Chawla
Publikováno v:
G3
G3, Genetics Society of America, 2020, 10 (9), pp.3399-3402. ⟨10.1534/g3.120.401554⟩
G3: Genes, Genomes, Genetics, Vol 10, Iss 9, Pp 3399-3402 (2020)
G3, 2020, 10 (9), pp.3399-3402. ⟨10.1534/g3.120.401554⟩
G3: Genes|Genomes|Genetics
G3, Genetics Society of America, 2020, 10 (9), pp.3399-3402. ⟨10.1534/g3.120.401554⟩
G3: Genes, Genomes, Genetics, Vol 10, Iss 9, Pp 3399-3402 (2020)
G3, 2020, 10 (9), pp.3399-3402. ⟨10.1534/g3.120.401554⟩
G3: Genes|Genomes|Genetics
The world is facing a global pandemic of COVID-19 caused by the SARS-CoV-2 coronavirus. Here we describe a collection of codon-optimized coding sequences for SARS-CoV-2 cloned into Gateway-compatible entry vectors, which enable rapid transfer into a
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::101937692f1c45cfaee086c7642679a3
https://www.hal.inserm.fr/inserm-02964375
https://www.hal.inserm.fr/inserm-02964375
Autor:
Oxana Pogoutse, Caroline Demeret, Jennifer J. Knapp, Kuang D, Dayag Sheykhkarimli, Yves Jacob, Anne-Claude Gingras, Hala Abdouni, Payman Samavarchi-Tehrani, Patricia Cassonnet, Mikko Taipale, Brian Raught, Frederick P. Roth, van der Werf S, Etienne Coyaud, Dae-Kyum Kim, Lee H, Aditya Chawla, Ashyad Rayhan
The world is facing a major health crisis, the global pandemic of COVID-19 caused by the SARS-CoV-2 coronavirus, for which no approved antiviral agents or vaccines are currently available. Here we describe a collection of codon-optimized coding seque
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4bf4aeaf3a9911fdab4332ba89e15cd1
Autor:
Estelle M.N. Laurent, Da Kuang, Frederick P. Roth, Michel Salzet, Sylvie van der Werf, David E. Hill, Caroline Demeret, Dae-Kyum Kim, Oxana Pogoutse, Georgios A. Pavlopoulos, Anne-Claude Gingras, Michael A. Calderwood, Marc Vidal, Hala Abdouni, Patricia Cassonnet, Yves Jacob, Anastassia V. Komarova, Aditya Chawla, Patrick Aloy, Isabelle Fournier, Ashyad Rayhan, Pascal Falter-Braun, Jean-Pascal Gimeno, Ulrich Stelzl, Roujia Li, Etienne Coyaud, Jennifer J. Knapp, Dayag Sheykhkarimli, Marie Duhamel, Payman Samavarchi Tehrani, Yorgos Sofianatos
Publikováno v:
bioRxiv
The worldwide SARS-CoV-2 outbreak poses a serious challenge to human societies and economies. SARS-CoV-2 proteins orchestrate complex pathogenic mechanisms that underlie COVID-19 disease. Thus, understanding how viral polypeptides rewire host protein
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f1c8c684c995eca63edc492d2a393199
https://hal-pasteur.archives-ouvertes.fr/pasteur-02940420/document
https://hal-pasteur.archives-ouvertes.fr/pasteur-02940420/document
Autor:
J. Harry Caufield, Christine Chieh-Lin Lai, Cedoljub Bundalovic-Torma, Majida El Bakkouri, Mohsen Hooshyar, Sun Young Kim, Charles Calmettes, Yogee Pandya, Zhongge Zhang, Hongbo Guo, Sessandra V. Rajagopala, Dan Burnside, Zoran Minic, Milton H. Saier, Erik Holtzapple, Trevor F. Moraes, Megha Shah, Mohan Babu, Åke Västermark, Irina A. Rodionova, Sadhna Phanse, Peter Uetz, Hiroyuki Aoki, Ashkan Golshani, Qingzhou Zhang, John Parkinson, Viktor Deineko, Stefan Wuchty, Andrew Emili, James Vlasblom, Alla Gagarinova, Jack Greenblatt, Yogesh Hooda, Jitender Mehla, Yue Jiang, Oxana Pogoutse, Olga Kagan, Ashwani Kumar
Publikováno v:
Nature Biotechnology
Nature Biotechnology, Nature Publishing Group, 2018, 36 (1), pp.103-112. ⟨10.1038/nbt.4024⟩
Nature Biotechnology, Nature Publishing Group, 2018, 36 (1), pp.103-112. ⟨10.1038/nbt.4024⟩
International audience; Bacterial cell envelope protein (CEP) complexes mediate a range of processes, including membrane assembly, antibiotic resistance and metabolic coordination. However, only limited characterization of relevant macromolecules has
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::245f97b83be64faa1e444fadeb6c2a29
https://hal-riip.archives-ouvertes.fr/pasteur-01688877
https://hal-riip.archives-ouvertes.fr/pasteur-01688877