Zobrazeno 1 - 10
of 111
pro vyhledávání: '"Oswaldo Trelles"'
Publikováno v:
Bioinformatics and Biology Insights, Vol 15 (2021)
Due to major breakthroughs in sequencing technologies throughout the last decades, the time and cost per sequencing experiment have reduced drastically, overcoming the data generation barrier during the early genomic era. Such a shift has encouraged
Externí odkaz:
https://doaj.org/article/17eadac312be410bb9b1cb5aeb6ed343
Publikováno v:
BMC Genomics, Vol 19, Iss 1, Pp 1-9 (2018)
Abstract Background Technical advances in mobile devices such as smartphones and tablets have produced an extraordinary increase in their use around the world and have become part of our daily lives. The possibility of carrying these devices in a poc
Externí odkaz:
https://doaj.org/article/45d99084c0d84b1b98a1b73be88636d7
Publikováno v:
Bioinformatics and Biology Insights, Vol 13 (2019)
The eclosion of data acquisition technologies has shifted the bottleneck in molecular biology research from data acquisition to data analysis. Such is the case in Comparative Genomics, where sequence analysis has transitioned from genes to genomes of
Externí odkaz:
https://doaj.org/article/c8579ac953ed4267b0fdbf2330aa99e5
Autor:
Esteban Pérez-Wohlfeil, Oscar Torreno, Louisa J. Bellis, Pedro L. Fernandes, Brane Leskosek, Oswaldo Trelles
Publikováno v:
Heliyon, Vol 4, Iss 12, Pp e01057- (2018)
In the last decade, bioinformatics has become an indispensable branch of modern science research, experiencing an explosion in financial support, developed applications and data collection. The growth of the datasets that are emerging from research l
Externí odkaz:
https://doaj.org/article/a2fe98f0f5e84fec8f399d6a6c450d7c
Autor:
Esteban Pérez-Wohlfeil, Jose A. Arjona-Medina, Oscar Torreno, Eugenia Ulzurrun, Oswaldo Trelles
Publikováno v:
BMC Genomics, Vol 17, Iss S8, Pp 351-361 (2016)
Abstract Background The field of metagenomics, defined as the direct genetic analysis of uncultured samples of genomes contained within an environmental sample, is gaining increasing popularity. The aim of studies of metagenomics is to determine the
Externí odkaz:
https://doaj.org/article/ef466d15d0c14365a08b3710c5854ef7
Autor:
Franciele Maboni Siqueira, Esteban Pérez-Wohlfeil, Fabíola Marques Carvalho, Oswaldo Trelles, Irene Silveira Schrank, Ana Tereza Ribeiro Vasconcelos, Arnaldo Zaha
Publikováno v:
PLoS ONE, Vol 12, Iss 7, p e0181503 (2017)
Mycoplasma hyopneumoniae is the etiologic agent of swine enzootic pneumonia. However other mycoplasma species and secondary bacteria are found as inhabitants of the swine respiratory tract, which can be also related to disease. In the present study w
Externí odkaz:
https://doaj.org/article/c200701ebd1541e2a17698bee7e9ae0b
Autor:
FRANCISCO AMIL-RUIZ, José Garrido-Gala, José Gadea, Rosario Blanco-Portales, Antonio Muñoz-Mérida, Oswaldo Trelles, Berta de los Santos, Francisco Teodoro Arroyo, Ana Aguado-Puig, Fernando Romero, José A Mercado, Fernando Pliego-Alfaro, Juan Muñoz-Blanco, José L Caballero
Publikováno v:
Frontiers in Plant Science, Vol 7 (2016)
Understanding the nature of pathogen host interaction may help improve strawberry (Fragaria × ananassa) cultivars. Plant resistance to pathogenic agents usually operates through a complex network of defense mechanisms mediated by a diverse array of
Externí odkaz:
https://doaj.org/article/5fc7478dc7744e64913b78cf98fb5d35
Publikováno v:
The Journal of Supercomputing. 79:8699-8728
The use of Graphics Processing Units to accelerate computational applications is increasingly being adopted due to its affordability, flexibility and performance. However, achieving top performance comes at the price of restricted data-parallelism mo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::befc0e09e074eaeba46d13a0fb1a45d0
https://doi.org/10.1007/s11227-022-05007-z
https://doi.org/10.1007/s11227-022-05007-z
Autor:
Oswaldo Trelles, Eugenia Ulzurrun, Esteban Pérez-Wohlfeil, Fernando D. González-Nilo, Yorley Duarte
Publikováno v:
Bioinformatics. 36:4203-4205
Motivation Molecular docking is aimed at predicting the conformation of small-molecule (ligands) within an identified binding site (BS) in a target protein (receptor). Protein–ligand docking plays an important role in modern drug discovery and bioc
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d25478cdbb0926c7007a89f3e533181f
https://doi.org/10.1093/bioinformatics/btaa481
https://doi.org/10.1093/bioinformatics/btaa481
Publikováno v:
Journal of Computational Biology. 25:841-849
The comparison and assessment of similarity across metagenomes are still an open problem. Uncultivated samples suffer from high variability, thus making it difficult for heuristic sequence comparison methods to find precise matches in reference datab
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7ddf430c35ffeba4fa3a999d1a0ebe97
https://doi.org/10.1089/cmb.2018.0081
https://doi.org/10.1089/cmb.2018.0081