Zobrazeno 1 - 10
of 18
pro vyhledávání: '"Oskar E Karlsson"'
Autor:
Martin Norling, Oskar E Karlsson-Lindsjö, Hadrien Gourlé, Erik Bongcam-Rudloff, Juliette Hayer
Publikováno v:
PLoS ONE, Vol 11, Iss 8, p e0160334 (2016)
Metagenomics, the sequence characterization of all genomes within a sample, is widely used as a virus discovery tool as well as a tool to study viral diversity of animals. Metagenomics can be considered to have three main steps; sample collection and
Externí odkaz:
https://doaj.org/article/a5a8b3d54d7b4392847140b261bb61f5
Publikováno v:
PLoS ONE, Vol 11, Iss 3, p e0151481 (2016)
Neonatal porcine diarrhoea of uncertain aetiology has been reported from a number of European countries. The aim of the present study was to use viral metagenomics to examine a potential viral involvement in this diarrhoea and to describe the intesti
Externí odkaz:
https://doaj.org/article/c3bff9868fd346fcba1857c2258ab1eb
Autor:
Fredrik Granberg, Marina Vicente-Rubiano, Consuelo Rubio-Guerri, Oskar E Karlsson, Deborah Kukielka, Sándor Belák, José Manuel Sánchez-Vizcaíno
Publikováno v:
PLoS ONE, Vol 8, Iss 2, p e57459 (2013)
The situation in Europe concerning honeybees has in recent years become increasingly aggravated with steady decline in populations and/or catastrophic winter losses. This has largely been attributed to the occurrence of a variety of known and "unknow
Externí odkaz:
https://doaj.org/article/186a5d2ef5a54a21b9431854d16ab46d
Publikováno v:
Pathogens, Vol 9, Iss 363, p 363 (2020)
Pathogens
Volume 9
Issue 5
Pathogens
Volume 9
Issue 5
An in-depth analysis was performed on Swedish broiler producers that had delivered chickens with Campylobacter to slaughter over several years, in order to identify possible transmission routes and formulate effective measures to prevent chickens bei
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8ac76932abf50c1204edb762c69f2b05
https://www.mdpi.com/2076-0817/9/5/363
https://www.mdpi.com/2076-0817/9/5/363
Autor:
Oskar E. Karlsson, Erik Bongcam-Rudloff, Hadrien Gourlé, Sammy Wambua, Nina Wambiji, Etienne P. de Villiers, Santie de Villiers, Angus H. H. Macdonald
Coral reefs face increased environmental threats from anthropomorphic climate change and pollution, from agriculture, industries and tourism. They are economically vital for many people worldwide, and harbour a fantastically diverse ecosystem, being
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1b756be09e59f4c08c3819efb9847c1b
Publikováno v:
Bioinformatics
Motivation The accurate in silico simulation of metagenomic datasets is of great importance for benchmarking bioinformatics tools as well as for experimental design. Users are dependant on large-scale simulation to not only design experiments and new
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::fda37e1bced34502bc25cdb26a4e1536
https://doi.org/10.1093/bioinformatics/bty630
https://doi.org/10.1093/bioinformatics/bty630
Autor:
Charlotta Löfström, Mikael Berg, Oskar E. Karlsson, Trine Lund Hansen, Rickard Knutsson, Fredrik Granberg
Publikováno v:
Karlsson, O E, Hansen, T, Knutsson, R, Löfström, C, Granberg, F & Berg, M 2013, ' Metagenomic Detection Methods in Biopreparedness Outbreak Scenarios ', Biosecurity and Bioterrorism, vol. 11, no. 1, pp. S146-S157 . https://doi.org/10.1089/bsp.2012.0077
In the field of diagnostic microbiology, rapid molecular methods are critically important for detecting pathogens. With rapid and accurate detection, preventive measures can be put in place early, thereby preventing loss of life and further spread of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::3495c450c561171a7e6b1afb67541fc7
https://doi.org/10.1089/bsp.2012.0077
https://doi.org/10.1089/bsp.2012.0077
Publikováno v:
Biosecurity and Bioterrorism: Biodefense Strategy, Practice, and Science. 11:S227-S234
Compared to routine diagnostics, screening for pathogens in outbreak situations, with or without intentional release, poses demands on the detection technology to not only indicate the presence of already known causative agents but also novel and une
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c8319e9165600e3cda79a3d0a637cecf
https://doi.org/10.1089/bsp.2013.0008
https://doi.org/10.1089/bsp.2013.0008
Publikováno v:
Veterinary Microbiology. 165:95-101
In our world, which is faced today with exceptional environmental changes and dramatically intensifying globalisation, we are encountering challenges due to many new factors, including the emergence or re-emergence of novel, so far "unknown" infectio
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::794899eef3136f31f404e9c804a1b05b
https://doi.org/10.1016/j.vetmic.2013.01.022
https://doi.org/10.1016/j.vetmic.2013.01.022
Publikováno v:
Revue Scientifique et Technique de l'OIE. 32:893-915
Sequencing methods have improved rapidly since the first versions of the Sanger techniques, facilitating the development of very powerful tools for detecting and identifying various pathogens, such as viruses, bacteria and other microbes. The ongoing
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::aa950007369b39df32fece998e5f3618
https://doi.org/10.20506/rst.32.2.2206
https://doi.org/10.20506/rst.32.2.2206