Zobrazeno 1 - 10
of 35
pro vyhledávání: '"Oommen K, Mathew"'
Autor:
Sandhya Sukumaran, Wilson Sebastian, A. Gopalakrishnan, Oommen K. Mathew, V. G. Vysakh, Prathibha Rohit, J. K. Jena
Publikováno v:
Scientific Data, Vol 10, Iss 1, Pp 1-8 (2023)
Abstract The Indian oil sardine, Sardinella longiceps, is a widely distributed and commercially important small pelagic fish of the Northern Indian Ocean. The genome of the Indian oil sardine has been characterized using Illumina and Nanopore platfor
Externí odkaz:
https://doaj.org/article/5acd8cfd3c16413fad8722ae2acb74ac
Autor:
K. Mohamed Shafi, Adwait G. Joshi, Iyer Meenakshi, Shaik Naseer Pasha, K. Harini, Jarjapu Mahita, Radha Sivarajan Sajeevan, Snehal D. Karpe, Pritha Ghosh, Sathyanarayanan Nitish, A. Gandhimathi, Oommen K. Mathew, Subramanian Hari Prasanna, Manoharan Malini, Eshita Mutt, Mahantesha Naika, Nithin Ravooru, Rajas M. Rao, Prashant N. Shingate, Anshul Sukhwal, Margaret S. Sunitha, Atul K. Upadhyay, Rithvik S. Vinekar, Ramanathan Sowdhamini
Publikováno v:
Data in Brief, Vol 30, Iss , Pp 105416- (2020)
In this paper, we present the data acquired during transcriptome analysis of the plant Moringa oleifera [1] from five different tissues (root, stem, leaf, flower and seed) by RNA sequencing. A total of 271 million reads were assembled with an N50 of
Externí odkaz:
https://doaj.org/article/936c5016a61c4cf89bf7091dfd8bd005
Autor:
Adwait G. Joshi, K. Harini, Iyer Meenakshi, K. Mohamed Shafi, Shaik Naseer Pasha, Jarjapu Mahita, Radha Sivarajan Sajeevan, Snehal D. Karpe, Pritha Ghosh, Sathyanarayanan Nitish, A. Gandhimathi, Oommen K. Mathew, Subramanian Hari Prasanna, Manoharan Malini, Eshita Mutt, Mahantesha Naika, Nithin Ravooru, Rajas M. Rao, Prashant N. Shingate, Anshul Sukhwal, Margaret S. Sunitha, Atul K. Upadhyay, Rithvik S. Vinekar, Ramanathan Sowdhamini
Publikováno v:
MethodsX, Vol 7, Iss , Pp 101053- (2020)
This protocol describes a stepwise process to identify proteins of interest from a query proteome derived from NGS data. We implemented this protocol on Moringa oleifera transcriptome to identify proteins involved in secondary metabolite and vitamin
Externí odkaz:
https://doaj.org/article/21c227e8302543dca462675eb86eb9d7
Publikováno v:
Current Bioinformatics. 18
Background:: The deep learning arena explores new dimensions once considered impossible to human intelligence. Recently, it has taken footsteps in the biological data world to deal with the diverse patterns of data derived from biomolecules. The conv
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::538aea81c3510f286b8c207c658dc0d5
https://doi.org/10.2174/1574893618666230320103421
https://doi.org/10.2174/1574893618666230320103421
Publikováno v:
Bioinformatics and Biology Insights, Vol 2016, Iss 10, Pp 105-109 (2016)
Externí odkaz:
https://doaj.org/article/8f36a3451d934e78a4d492a1fa8191de
CNN-LSTM based classification of polo like kinase family of Proteins: An emerging cancer drug target
Publikováno v:
Materials Today: Proceedings. 58:445-450
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::552760aa99ee859a1e0c8f8c66067409
https://doi.org/10.1016/j.matpr.2022.02.395
https://doi.org/10.1016/j.matpr.2022.02.395
Near-chromosomal de novo assembly of Bengal tiger genome reveals genetic hallmarks of apex predation
Autor:
Harsh Shukla, Kushal Suryamohan, Anubhab Khan, Krishna Mohan, Rajadurai C Perumal, Oommen K Mathew, Ramesh Menon, Mandumpala Davis Dixon, Megha Muraleedharan, Boney Kuriakose, Saju Michael, Sajesh P Krishnankutty, Arun Zachariah, Somasekar Seshagiri, Uma Ramakrishnan
Publikováno v:
GigaScience. 12
The tiger, a poster child for conservation, remains an endangered apex predator. Continued survival and recovery will require a comprehensive understanding of genetic diversity and the use of such information for population management. A high-quality
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7244adab805cf18daef20c3d3d4274ae
https://doi.org/10.1093/gigascience/giac112
https://doi.org/10.1093/gigascience/giac112
Publikováno v:
Bioinformatics and Biology Insights, Vol 2014, Iss 8, Pp 209-214 (2014)
Externí odkaz:
https://doaj.org/article/4ae3ef4e36504c4c9ffc76835b5e93a8
Autor:
K H Dhanyalakshmi, Mahantesha B N Naika, R S Sajeevan, Oommen K Mathew, K Mohamed Shafi, Ramanathan Sowdhamini, Karaba N Nataraja
Publikováno v:
PLoS ONE, Vol 11, Iss 3, p e0151323 (2016)
The modern sequencing technologies are generating large volumes of information at the transcriptome and genome level. Translation of this information into a biological meaning is far behind the race due to which a significant portion of proteins disc
Externí odkaz:
https://doaj.org/article/1b2efe4528b8498fa966beec282b96c9
Autor:
Meredith Sagolla, Gus A. Wright, Hiroki Shibata, Ying Jiun J. Chen, Dinesh Velayutham, Meng Wu, Rajadurai Chinnasamy Perumal, Ivan Koludarov, Sangeetha Mohan, Kate Senger, Eric Stawiski, Subhra Chaudhuri, Peter Liu, Brendan Faherty, Aju Antony, Kristen Wiley, Rami N. Hannoush, Matthew Jevit, Oommen K. Mathew, Mandumpala Davis Dixon, Arun Zachariah, Ridhi Goel, Leonard D. Goldstein, Guillermo de la Rosa, Terje Raudsepp, Jeremy Stinson, Sajesh Puthenpurackal Krishnankutty, James Ziai, Zora Modrusan, Donald S. Kirkpatrick, Steffen Durinck, Joseph Guillory, Kushal Suryamohan, Megha Muraleedharan, R. Manjunatha Kini, Aakrosh Ratan, Markus S. Schröder, Miriam Baca, Somasekar Seshagiri, Domagoj Vucic, Boney Kuriakose, Derek Vargas
Publikováno v:
Nature Genetics
Snakebite envenoming is a serious and neglected tropical disease that kills ~100,000 people annually. High-quality, genome-enabled comprehensive characterization of toxin genes will facilitate development of effective humanized recombinant antivenom.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::d80d077d05737d58c9c7439d92e33f97
http://europepmc.org/articles/PMC8075977
http://europepmc.org/articles/PMC8075977