Streptomyces spiramenti sp. nov., isolated from a deep-sea microbial mat

Autor: Rachel M. Loughran, Caitlin M. Diefendorf, Jassmine R. Reill-VanSise, Edward A. Mitchell, Oliver B. Vining, David A. Gallegos, Gregory Miller, Marc J. Koyack, David K. Oline, Orion S. Rivers, Blake Ushijima, Jimmy H. Saw, Michael O. Gaylor, Kerry L. McPhail, Patrick Videau

Publikováno v: Archives of Microbiology. 204

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::50aab24dea98ddfb01f4685027969fd1
https://doi.org/10.1007/s00203-022-03326-6

Draft Genome Sequence of Streptomyces sp. Strain ventii, Isolated from a Microbial Mat near Hydrothermal Vents within the Axial Seamount in the Pacific Ocean, and Resequencing of the Type Strains Streptomyces lonarensis NCL 716 and Streptomyces bohaiensis 11A07

Autor: Kerry L. McPhail, Monica C. Deadmond, Edward A. Mitchell, Oliver B. Vining, Brie E. Paddock, Rachel M. Loughran, Patrick Videau, David K. Oline, Marc J. Koyack, Kaysa M. Pfannmuller, Blake Ushijima, Jimmy H. Saw, Benjamin J. Wasson, David A. Gallegos

Publikováno v: Microbiology Resource Announcements. 9

The draft genome of Streptomyces sp. strain ventii, an environmental isolate recovered from deep-sea hydrothermal vents in the Pacific Ocean, is presented along with the resequenced draft genomes of the type strains Streptomyces bohaiensis 11A07 and

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::3ab12e420e30f5819d54b19d5d8f9e54
https://doi.org/10.1128/mra.00607-20

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

Autor: Jingqui Dai, Alexey V. Melnik, Jenan J. Kharbush, Kenji L. Kurita, Robert A. Keyzers, Katrina M. Waters, Mario Sandoval-Calderón, Ajit Jadhav, Clifford A. Kapono, Charles B. Larson, Evgenia Glukhov, Danielle VanLeer, Daniel P. Demarque, Lars Jelsbak, Yi Zeng, Eve A. Granatosky, Kit Pogliano, Maryam Elfeki, Marcelino Gutiérrez, Jeramie D. Watrous, Katherine R. Duncan, Laura M. Sanchez, Jeremy Carver, Brendan M. Duggan, Thomas O. Metz, Julia A. Vorholt, Pep Charusanti, Paul Shinn, Nuno Bandeira, Pavel A. Pevzner, Amy C. Sims, Nobuhiro Koyama, David Gonzalez, Xueting Liu, Denise Brentan Silva, Venkat R. Macherla, Pieter C. Dorrestein, Andrew R. Johnson, Jörn Piel, Michael J. Meehan, Delphine Parrot, Jehad Almaliti, Don D. Nguyen, Louis-Félix Nothias, Wenyuan Shi, Max Crüsemann, Cristopher A. Boya P., Philip G. Williams, Erin E. Carlson, Ronnie G. Gavilan, Yao Peng, Roland D. Kersten, Jennifer E. Kyle, Bertrand Aigle, Yu-Liang Yang, Mingxun Wang, Amina Bouslimani, Lixin Zhang, Ram P. Neupane, Chih-Chuang Liaw, Tyler Peryea, Eric J. N. Helfrich, Kristian Fog Nielsen, Hans-Ulrich Humpf, Robert A. Quinn, Rolf Müller, Paul R. Jensen, Hailey Houson, Eduardo Esquenazi, Kathleen Dorrestein, Vanessa V. Phelan, Bernhard O. Palsson, Lisa Vuong, Cheng-Chih Hsu, Sophie Tomasi, Trent R. Northen, Laura A. Pace, Marc Litaudon, Samantha J. Mascuch, Chen Zhang, Maria Maansson, Ashley M. Sidebottom, Vinayak Agarwal, Ricardo Pianta Rodrigues da Silva, Ellis C. O’Neill, Tal Luzzatto-Knaan, Florian Ryffel, Oliver B. Vining, Andrés M. C. Rodríguez, Andreas Klitgaard, Enora Briand, Brian T. Murphy, Neha Garg, Norberto Peporine Lopes, Ralph S. Baric, William H. Gerwick, Pierre-Marie Allard, Daniel Torres-Mendoza, Jeffrey S. McLean, Stefan Jenkins, Lena Gerwick, Theodore Alexandrov, Roger G. Linington, Egle Pociute, Christian Sohlenkamp, Joshua R. Gurr, Matthew F. Traxler, Wei-Ting Liu, Rob Knight, Anne Lamsa, Anna Edlund, Bradley S. Moore, Prasad Phapale, Hosein Mohimani, Karin Kleigrewe, Charlotte Frydenlund Michelsen, Lucas Miranda Marques, Niclas Engene, Jean-Luc Wolfender, Thomas Hoffman, Rachel J. Dutton, Dac-Trung Nguyen, Paul D. Boudreau, Dimitrios J. Floros, Kerry L. McPhail, Carla Porto, Brian E. Sedio

Publikováno v: Nature Biotechnology
Nature Biotechnology, 2016, 34 (8), pp.828-837. ⟨10.1038/nbt.3597⟩
Nature Biotechnology, Vol. 34, No 8 (2016) pp. 828-837
Nature Biotechnology, Nature Publishing Group, 2016, 34 (8), pp.828-837. ⟨10.1038/nbt.3597⟩
Nature Biotechnology (1087-0156) (Nature Publishing Group), 2016-08, Vol. 34, N. 8, P. 828-837
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP
Wang, M, Carver, J J, Pevzner, P, Mohiman, H, Bandeira, N, Phelan, V V, Sanchez, L M, Garg, N, Watrous, J, Luzzatto-Knaa, T, Frydenlund Michelsen, C, Jelsbak, L, Månsson, M, Klitgaard, A & Nielsen, K F 2016, ' Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking ', Nature Biotechnology, vol. 34, no. 8, pp. 828-837 . https://doi.org/10.1038/nbt.3597

International audience; The potential of the diverse chemistries present in natural products (NP) for biotechnology and medicine remains untapped because NP databases are not searchable with raw data and the NP community has no way to share data othe

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f2f2e3140b4f64a60719d91435998b61
https://doi.org/10.1038/nbt.3597

Phloroglucinol functions as an intracellular and intercellular chemical messenger influencing gene expression inPseudomonas protegens

Autor: Alex Buchanan, Oliver B. Vining, Joyce E. Loper, Jennifer C. Clifford, Teresa A. Kidarsa, Jeff H. Chang, Kerry L. McPhail

Publikováno v: Environmental Microbiology. 18:3296-3308

Bacteria can be both highly communicative and highly competitive in natural habitats and antibiotics are thought to play a role in both of these processes. The soil bacterium Pseudomonas protegens Pf-5 produces a spectrum of antibiotics, two of which

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::a97212b3896b3724788e74df354e4e2b
https://doi.org/10.1111/1462-2920.13043

Development of a Quantitative Assay Amenable for High-Throughput Screening to Target the Type II Secretion System for New Treatments against Plant-Pathogenic Bacteria

Autor: Nini Tran, Mark D. Azevedo, Gary M. Banowetz, Donald J. Armstrong, Oliver B. Vining, Aleksandra E. Sikora, Ryszard A. Zielke, Kerry L. McPhail

Publikováno v: SLAS Discovery. 18:921-929

Plant-pathogenic bacteria are the causative agents of diseases in important agricultural crops and ornamental plants. The severe economic burden of these diseases requires seeking new approaches for their control, particularly because phytopathogenic

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::00190964f67dcfbf9365673e83c9dd08
https://doi.org/10.1177/1087057113485426