Zobrazeno 1 - 10
of 79
pro vyhledávání: '"Olga Dudchenko"'
Autor:
Michelle Huang, Sarah Kingan, Douglas Shoue, Oanh Nguyen, Lutz Froenicke, Brendan Galvin, Christine Lambert, Ruqayya Khan, Chirag Maheshwari, David Weisz, Gareth Maslen, Helen Davison, Erez Lieberman Aiden, Jonas Korlach, Olga Dudchenko, Mary Ann McDowell, Stephen Richards
Publikováno v:
Scientific Data, Vol 11, Iss 1, Pp 1-8 (2024)
Abstract Phlebotomine sand flies are the vectors of leishmaniasis, a neglected tropical disease. High-quality reference genomes are an important tool for understanding the biology and eco-evolutionary dynamics underpinning disease epidemiology. Previ
Externí odkaz:
https://doaj.org/article/ba4febc13c8642608ddf3f0102c33039
Autor:
Hannah L. Harris, Huiya Gu, Moshe Olshansky, Ailun Wang, Irene Farabella, Yossi Eliaz, Achyuth Kalluchi, Akshay Krishna, Mozes Jacobs, Gesine Cauer, Melanie Pham, Suhas S. P. Rao, Olga Dudchenko, Arina Omer, Kiana Mohajeri, Sungjae Kim, Michael H. Nichols, Eric S. Davis, Dimos Gkountaroulis, Devika Udupa, Aviva Presser Aiden, Victor G. Corces, Douglas H. Phanstiel, William Stafford Noble, Guy Nir, Michele Di Pierro, Jeong-Sun Seo, Michael E. Talkowski, Erez Lieberman Aiden, M. Jordan Rowley
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-17 (2023)
Abstract Nuclear compartments are prominent features of 3D chromatin organization, but sequencing depth limitations have impeded investigation at ultra fine-scale. CTCF loops are generally studied at a finer scale, but the impact of looping on proxim
Externí odkaz:
https://doaj.org/article/273c83ceac55444f8d76b4044e6d0017
Autor:
Shamshad Ul Hassan, Eng Guan Chua, Erwin A. Paz, Chin Yen Tay, Johan C. Greeff, Dieter G. Palmer, Olga Dudchenko, Erez Lieberman Aiden, Graeme B. Martin, Parwinder Kaur
Publikováno v:
BMC Genomics, Vol 24, Iss 1, Pp 1-11 (2023)
Abstract Background Gastrointestinal (GIT) helminthiasis is a global problem that affects livestock health, especially in small ruminants. One of the major helminth parasites of sheep and goats, Teladorsagia circumcincta, infects the abomasum and cau
Externí odkaz:
https://doaj.org/article/fa9b1737b9834ae28a37b852619ea8d2
Autor:
Anjana C. Karawita, Yuanyuan Cheng, Keng Yih Chew, Arjun Challagulla, Robert Kraus, Ralf C. Mueller, Marcus Z. W. Tong, Katina D. Hulme, Helle Bielefeldt-Ohmann, Lauren E. Steele, Melanie Wu, Julian Sng, Ellesandra Noye, Timothy J. Bruxner, Gough G. Au, Suzanne Lowther, Julie Blommaert, Alexander Suh, Alexander J. McCauley, Parwinder Kaur, Olga Dudchenko, Erez Aiden, Olivier Fedrigo, Giulio Formenti, Jacquelyn Mountcastle, William Chow, Fergal J. Martin, Denye N. Ogeh, Françoise Thiaud-Nissen, Kerstin Howe, Alan Tracey, Jacqueline Smith, Richard I. Kuo, Marilyn B. Renfree, Takashi Kimura, Yoshihiro Sakoda, Mathew McDougall, Hamish G. Spencer, Michael Pyne, Conny Tolf, Jonas Waldenström, Erich D. Jarvis, Michelle L. Baker, David W. Burt, Kirsty R. Short
Publikováno v:
Genome Biology, Vol 24, Iss 1, Pp 1-24 (2023)
Abstract Background The Australian black swan (Cygnus atratus) is an iconic species with contrasting plumage to that of the closely related northern hemisphere white swans. The relative geographic isolation of the black swan may have resulted in a li
Externí odkaz:
https://doaj.org/article/78ecfc98e26e450ea7815f3fe5cca8c8
Autor:
Vinícius G. Contessoto, Olga Dudchenko, Erez Lieberman Aiden, Peter G. Wolynes, José N. Onuchic, Michele Di Pierro
Publikováno v:
Nature Communications, Vol 14, Iss 1, Pp 1-12 (2023)
Within the nucleus, the genome of eukaryotes folds into partially organized three-dimensional structures specific to each organism. Here the authors perform physical simulations to study the genome architecture of Aedes aegypti, which reveal an ensem
Externí odkaz:
https://doaj.org/article/4fc89a1f7ff54765accd8077aab1f76b
Autor:
Per A Adastra, Neva C Durand, Namita Mitra, Saul Godinez Pulido, Ragini Mahajan, Alyssa Blackburn, Zane L Colaric, Joshua W M Theisen, David Weisz, Olga Dudchenko, Andreas Gnirke, Suhas S P Rao, Parwinder Kaur, Erez Lieberman Aiden, Aviva Presser Aiden
Publikováno v:
PLoS ONE, Vol 18, Iss 11, p e0294283 (2023)
Early detection of SARS-CoV-2 infection is key to managing the current global pandemic, as evidence shows the virus is most contagious on or before symptom onset. Here, we introduce a low-cost, high-throughput method for diagnosing and studying SARS-
Externí odkaz:
https://doaj.org/article/f33823f08f79457193cd8c50c663b241
Autor:
Tomáš Brůna, Rishi Aryal, Olga Dudchenko, Daniel James Sargent, Daniel Mead, Matteo Buti, Andrea Cavallini, Timo Hytönen, Javier Andrés, Melanie Pham, David Weisz, Flavia Mascagni, Gabriele Usai, Lucia Natali, Nahla Bassil, Gina E Fernandez, Alexandre Lomsadze, Mitchell Armour, Bode Olukolu, Thomas Poorten, Caitlin Britton, Jahn Davik, Hamid Ashrafi, Erez Lieberman Aiden, Mark Borodovsky, Margaret Worthington
Publikováno v:
G3: Genes, Genomes, Genetics, Vol 13, Iss 2 (2022)
AbstractBlackberries (RubusRubusIdaeobatusR. occidentalisR. idaeusR. chingiiRubusR. argutusR. chingiiRubus
Externí odkaz:
https://doaj.org/article/64445879d48e4e108e4672bcde2d5ebd
Autor:
Richard J. Edwards, Matt A. Field, James M. Ferguson, Olga Dudchenko, Jens Keilwagen, Benjamin D. Rosen, Gary S. Johnson, Edward S. Rice, La Deanna Hillier, Jillian M. Hammond, Samuel G. Towarnicki, Arina Omer, Ruqayya Khan, Ksenia Skvortsova, Ozren Bogdanovic, Robert A. Zammit, Erez Lieberman Aiden, Wesley C. Warren, J. William O. Ballard
Publikováno v:
BMC Genomics, Vol 22, Iss 1, Pp 1-19 (2021)
Abstract Background Basenjis are considered an ancient dog breed of central African origins that still live and hunt with tribesmen in the African Congo. Nicknamed the barkless dog, Basenjis possess unique phylogeny, geographical origins and traits,
Externí odkaz:
https://doaj.org/article/6ff5d0c6b0d648a3a470a79f1540a8d8
Autor:
Andreas J. Stroehlein, Pasi K. Korhonen, V. Vern Lee, Stuart A. Ralph, Margaret Mentink-Kane, Hong You, Donald P. McManus, Louis-Albert Tchuem Tchuenté, J. Russell Stothard, Parwinder Kaur, Olga Dudchenko, Erez Lieberman Aiden, Bicheng Yang, Huanming Yang, Aidan M. Emery, Bonnie L. Webster, Paul J. Brindley, David Rollinson, Bill C. H. Chang, Robin B. Gasser, Neil D. Young
Publikováno v:
PLoS Pathogens, Vol 18, Iss 2 (2022)
Urogenital schistosomiasis is caused by the blood fluke Schistosoma haematobium and is one of the most neglected tropical diseases worldwide, afflicting > 100 million people. It is characterised by granulomata, fibrosis and calcification in urogenita
Externí odkaz:
https://doaj.org/article/fefe19173810481c8b859d7a47f4f70f
Autor:
Jahn Davik, Dag Røen, Erik Lysøe, Matteo Buti, Simeon Rossman, Muath Alsheikh, Erez Lieberman Aiden, Olga Dudchenko, Daniel James Sargent
Publikováno v:
PLoS ONE, Vol 17, Iss 3 (2022)
Rubus idaeus L. (red raspberry), is a perennial woody plant species of the Rosaceae family that is widely cultivated in the temperate regions of world and is thus an economically important soft fruit species. It is prized for its flavour and aroma, a
Externí odkaz:
https://doaj.org/article/a1a2243f1dd5453792208e68e239271b