Zobrazeno 1 - 10
of 134
pro vyhledávání: '"Oleg V Krokhin"'
Autor:
Jilagamazhi Fu, Parveen Sharma, Vic Spicer, Oleg V Krokhin, Xiangli Zhang, Brian Fristensky, Nazim Cicek, Richard Sparling, David B Levin
Publikováno v:
PLoS ONE, Vol 10, Iss 11, p e0142322 (2015)
Transcriptomes and proteomes of Pseudomonas putida LS46 cultured with biodiesel-derived waste glycerol or waste free fatty acids, as sole carbon sources, were compared under conditions that were either permissive or non-permissive for synthesis of me
Externí odkaz:
https://doaj.org/article/2903687dc6f44fbc98f30bde1faba356
Autor:
Tobin J Verbeke, Xiangli Zhang, Bernard Henrissat, Vic Spicer, Thomas Rydzak, Oleg V Krokhin, Brian Fristensky, David B Levin, Richard Sparling
Publikováno v:
PLoS ONE, Vol 8, Iss 3, p e59362 (2013)
The microbial production of ethanol from lignocellulosic biomass is a multi-component process that involves biomass hydrolysis, carbohydrate transport and utilization, and finally, the production of ethanol. Strains of the genus Thermoanaerobacter ha
Externí odkaz:
https://doaj.org/article/eee083cd04d24250a8e95e6cec5e6426
Autor:
Juraj Lenčo, Siddharth Jadeja, Denis K. Naplekov, Oleg V. Krokhin, Maria A. Khalikova, Petr Chocholouš, Jiří Urban, Ken Broeckhoven, Lucie Nováková, František Švec
Publikováno v:
Journal of Proteome Research. 21:2846-2892
The performance of the current bottom-up liquid chromatography hyphenated with mass spectrometry (LC-MS) analyses has undoubtedly been fueled by spectacular progress in mass spectrometry. It is thus not surprising that the MS instrument attracts the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cca52ffc8a7cb5e04fa95b12488b54c1
https://doi.org/10.1021/acs.jproteome.2c00407
https://doi.org/10.1021/acs.jproteome.2c00407
Publikováno v:
EuPA Open Proteomics, Vol 4, Iss C, Pp 18-24 (2014)
A fluorophosphonate based alkyne activity probe was used for the selective labeling of active serine hydrolases in intact Escherichia coli cells. A biotin-azide tag was subsequently attached to the alkyne functionality of the probe with copper-cataly
Externí odkaz:
https://doaj.org/article/859420d9186f41749118ae08694a27f5
Autor:
Mahadevappa Hemshekhar, Sana Faiyaz, Ka-Yee Grace Choi, Oleg V. Krokhin, Neeloffer Mookherjee
Publikováno v:
Biomolecules, Vol 9, Iss 9, p 501 (2019)
The anti-endotoxin activity of the cationic peptide LL-37 and its derivative IG-19 is attributed to electrostatic interaction of the peptides’ positive charge with negatively charged bacterial lipopolysaccharides (LPS), and in part to the alteratio
Externí odkaz:
https://doaj.org/article/f695932aa530465b979fb77252795f32
Autor:
Benilde Mizero, Carina Villacrés, Victor Spicer, Rosa Viner, Julian Saba, Bhavinkumar Patel, Sergei Snovida, Penny Jensen, Andreas Huhmer, Oleg V. Krokhin
Publikováno v:
Journal of proteome research. 21(5)
We present the first detailed study of chromatographic behavior of peptides labeled with tandem mass tags (TMT and TMTpro) in 2D LC for proteomic applications. Carefully designed experimental procedures have permitted generating data sets of over 100
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1cd5e8b03af6ca96dfb8f627118aba66
https://pubmed.ncbi.nlm.nih.gov/35363494
https://pubmed.ncbi.nlm.nih.gov/35363494
Publikováno v:
Journal of Separation Science. 43:3830-3839
Separation selectivity and detection sensitivity of reversed-phase high-performance liquid chromatography with tandem mass spectrometry analyses were compared for formic (0.1%) and formic/heptafluorobutyric (0.1%/0.005%) acid based eluents using a pr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f35917c911f88fa0b015eb8c1b2a7e9c
https://doi.org/10.1002/jssc.202000578
https://doi.org/10.1002/jssc.202000578
Autor:
Benilde Mizero, Ying Lao, Daniel Gussakovsky, Victor Spicer, Oleg V. Krokhin, Darien Yeung, Nicole Klaassen
Publikováno v:
Analytical Chemistry. 92:3904-3912
Peptide separation orthogonality for 16 different 2D LC-ESI MS systems has been evaluated. To compare and contrast the behavior of the first dimension columns, a large proteomic retention data set of ∼30 000 tryptic peptides was collected for each
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7e8cfc7d76b434e3b4661e1ac3ade73a
https://doi.org/10.1021/acs.analchem.9b05407
https://doi.org/10.1021/acs.analchem.9b05407
Publikováno v:
Microorganisms. 10(2)
Voltage-dependent anion-selective channels (VDAC) maintain the bidirectional flow of small metabolites across the mitochondrial outer membrane and participate in the regulation of multiple cellular processes. To understand the roles of VDAC in cellul
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::234a7850b88ea14480a487bfa1a00de2
https://pubmed.ncbi.nlm.nih.gov/35208654
https://pubmed.ncbi.nlm.nih.gov/35208654
Publikováno v:
Analytical Chemistry. 91:13360-13366
The sequence-specific retention calculator algorithm (SSRCalc) [ Krokhin , O. V. Anal. Chem. 2006 , 78 , 7785 ] was adapted for the prediction of retention times of N-glycopeptides separated by reversed-phase high performance liquid chromatography (R
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0409a761cebb35935d737f9a9f9475eb
https://doi.org/10.1021/acs.analchem.9b02584
https://doi.org/10.1021/acs.analchem.9b02584