Výsledky vyhledávání - "Odile Lecompte"

Akademický článek

Genomic insights into the conservation status of the Idle Crayfish Austropotamobius bihariensis Pârvulescu, 2019: low genetic diversity in the endemic crayfish species of the Apuseni Mountains

Autor: Lena Bonassin, Lucian Pârvulescu, Ljudevit Luka Boštjančić, Caterina Francesconi, Judith Paetsch, Christelle Rutz, Odile Lecompte, Kathrin Theissinger

Publikováno v: BMC Ecology and Evolution, Vol 24, Iss 1, Pp 1-13 (2024)

Abstract Background Biodiversity in freshwater ecosystems is declining due to an increased anthropogenic footprint. Freshwater crayfish are keystone species in freshwater ecosystems and play a crucial role in shaping the structure and function of the

Externí odkaz: https://doaj.org/article/163290cedb3e4ff9af3fd520ed187782

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Akademický článek

The MetaInvert soil invertebrate genome resource provides insights into below-ground biodiversity and evolution

Publikováno v: Communications Biology, Vol 6, Iss 1, Pp 1-12 (2023)

Abstract Soil invertebrates are among the least understood metazoans on Earth. Thus far, the lack of taxonomically broad and dense genomic resources has made it hard to thoroughly investigate their evolution and ecology. With MetaInvert we provide dr

Externí odkaz: https://doaj.org/article/3810b211b8bb4b6cb7517d41259eb490

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Akademický článek

Protein length distribution is remarkably uniform across the tree of life

Autor: Yannis Nevers, Natasha M. Glover, Christophe Dessimoz, Odile Lecompte

Publikováno v: Genome Biology, Vol 24, Iss 1, Pp 1-20 (2023)

Abstract Background In every living species, the function of a protein depends on its organization of structural domains, and the length of a protein is a direct reflection of this. Because every species evolved under different evolutionary pressures

Externí odkaz: https://doaj.org/article/8308122daabd42d08e1cfd27633547a3

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Akademický článek

Host-pathogen coevolution drives innate immune response to Aphanomyces astaci infection in freshwater crayfish: transcriptomic evidence

Autor: Ljudevit Luka Boštjančić, Caterina Francesconi, Christelle Rutz, Lucien Hoffbeck, Laetitia Poidevin, Arnaud Kress, Japo Jussila, Jenny Makkonen, Barbara Feldmeyer, Miklós Bálint, Klaus Schwenk, Odile Lecompte, Kathrin Theissinger

Publikováno v: BMC Genomics, Vol 23, Iss 1, Pp 1-21 (2022)

Abstract Background For over a century, scientists have studied host-pathogen interactions between the crayfish plague disease agent Aphanomyces astaci and freshwater crayfish. It has been hypothesised that North American crayfish hosts are disease-r

Externí odkaz: https://doaj.org/article/07c190f8600f4634b7e4880f19eab134

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Akademický článek

Dataset of the de novo assembly and annotation of the marbled crayfish and the noble crayfish hepatopancreas transcriptomes

Publikováno v: BMC Research Notes, Vol 15, Iss 1, Pp 1-4 (2022)

Abstract Objectives Crayfish plague disease, caused by the oomycete pathogen Aphanomyces astaci represents one of the greatest risks for the biodiversity of the freshwater crayfish. This data article covers the de novo transcriptome assembly and anno

Externí odkaz: https://doaj.org/article/7bcc3a0f8d45415ba059fa7e381df87f

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Akademický článek

Real or fake? Measuring the impact of protein annotation errors on estimates of domain gain and loss events

Autor: Arnaud Kress, Olivier Poch, Odile Lecompte, Julie D. Thompson

Publikováno v: Frontiers in Bioinformatics, Vol 3 (2023)

Protein annotation errors can have significant consequences in a wide range of fields, ranging from protein structure and function prediction to biomedical research, drug discovery, and biotechnology. By comparing the domains of different proteins, s

Externí odkaz: https://doaj.org/article/54419616923b41a4894ea727592a1fa9

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Akademický článek

Proteome adaptation to high temperatures in the ectothermic hydrothermal vent Pompeii worm.

Autor: Didier Jollivet, Jean Mary, Nicolas Gagnière, Arnaud Tanguy, Eric Fontanillas, Isabelle Boutet, Stéphane Hourdez, Béatrice Segurens, Jean Weissenbach, Olivier Poch, Odile Lecompte

Publikováno v: PLoS ONE, Vol 7, Iss 2, p e31150 (2012)

Taking advantage of the massive genome sequencing effort made on thermophilic prokaryotes, thermal adaptation has been extensively studied by analysing amino acid replacements and codon usage in these unicellular organisms. In most cases, adaptation

Externí odkaz: https://doaj.org/article/8cd62b9fe56842a784e43b7f5ee686c1

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Akademický článek

A comprehensive benchmark study of multiple sequence alignment methods: current challenges and future perspectives.

Autor: Julie D Thompson, Benjamin Linard, Odile Lecompte, Olivier Poch

Publikováno v: PLoS ONE, Vol 6, Iss 3, p e18093 (2011)

Multiple comparison or alignmentof protein sequences has become a fundamental tool in many different domains in modern molecular biology, from evolutionary studies to prediction of 2D/3D structure, molecular function and inter-molecular interactions

Externí odkaz: https://doaj.org/article/fbb2d2a601a842d6a013340053cb038c

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