The phage protein paratox is a multifunctional metabolic regulator of Streptococcus.

Autor: Muna TH; Department of Microbiology, University of Manitoba, 45 Chancellors Circle, Buller Building, Winnipeg MB, R3T 2N2, Canada., Rutbeek NR; Department of Microbiology, University of Manitoba, 45 Chancellors Circle, Buller Building, Winnipeg MB, R3T 2N2, Canada., Horne J; Department of Microbiology, University of Manitoba, 45 Chancellors Circle, Buller Building, Winnipeg MB, R3T 2N2, Canada., Lao YW; Manitoba Centre for Proteomics and Systems Biology, University of Manitoba, 799 John Buhler Research Centre, 715 McDermot Avenue, Winnipeg MB, R3E 3P4, Canada., Krokhin OV; Manitoba Centre for Proteomics and Systems Biology, University of Manitoba, 799 John Buhler Research Centre, 715 McDermot Avenue, Winnipeg MB, R3E 3P4, Canada.; Department of Internal Medicine, Rady Faculty of Health Sciences, University of Manitoba, 799 John Buhler Research Centre, 715 McDermot Avenue, Winnipeg MB, R3E 3P4, Canada., Prehna G; Department of Microbiology, University of Manitoba, 45 Chancellors Circle, Buller Building, Winnipeg MB, R3T 2N2, Canada.

Publikováno v: Nucleic acids research [Nucleic Acids Res] 2024 Dec 14. Date of Electronic Publication: 2024 Dec 14.

Peptide retention time prediction for hydrophilic interaction liquid chromatography at acidic pH in formic-acid based eluents.

Autor: Yeung D; Manitoba Centre for Proteomics and Systems Biology, 799 JBRC, 715 McDermot Avenue, Winnipeg R3E 3P4, Canada; Department of Biochemistry and Medical Genetics, University of Manitoba, 336 BMSB, 745 Bannatyne Avenue, Winnipeg R3E 0J9, Canada., Spicer V; Manitoba Centre for Proteomics and Systems Biology, 799 JBRC, 715 McDermot Avenue, Winnipeg R3E 3P4, Canada., Krokhin OV; Manitoba Centre for Proteomics and Systems Biology, 799 JBRC, 715 McDermot Avenue, Winnipeg R3E 3P4, Canada; Department of Biochemistry and Medical Genetics, University of Manitoba, 336 BMSB, 745 Bannatyne Avenue, Winnipeg R3E 0J9, Canada; Department of Chemistry, University of Manitoba, 360 Parker Building, 144 Dysart Road, Winnipeg R3T 2N2, Canada; Department of Internal Medicine, University of Manitoba, 799 JBRC, 715 McDermot Avenue, Winnipeg R3E 3P4, Canada. Electronic address: oleg.krokhine@umanitoba.ca.

Publikováno v: Journal of chromatography. A [J Chromatogr A] 2024 Nov 08; Vol. 1736, pp. 465355. Date of Electronic Publication: 2024 Sep 07.

Toward an Ultimate Solution for Peptide Retention Time Prediction: The Effect of Column Temperature on Separation Selectivity.

Autor: Villacrés C; Manitoba Centre for Proteomics and Systems Biology, Winnipeg R3E 3P4, Canada., Mizero B; Department of Chemistry, University of Manitoba, Winnipeg R3T 2N2, Canada., Spicer V; Manitoba Centre for Proteomics and Systems Biology, Winnipeg R3E 3P4, Canada., Viner R; Thermo Fisher Scientific, San Jose, California 95134, United States., Saba J; Thermo Fisher Scientific, San Jose, California 95134, United States., Patel B; Thermo Fisher Scientific, Rockford, Illinois 61101, United States., Snovida S; Thermo Fisher Scientific, Rockford, Illinois 61101, United States., Jensen P; Thermo Fisher Scientific, Rockford, Illinois 61101, United States., Huhmer A; Thermo Fisher Scientific, San Jose, California 95134, United States., Krokhin OV; Manitoba Centre for Proteomics and Systems Biology, Winnipeg R3E 3P4, Canada.; Department of Chemistry, University of Manitoba, Winnipeg R3T 2N2, Canada.; Department of Internal Medicine, University of Manitoba, Winnipeg R3E 3P4, Canada.

Publikováno v: Journal of proteome research [J Proteome Res] 2024 Apr 05; Vol. 23 (4), pp. 1488-1494. Date of Electronic Publication: 2024 Mar 26.

Compendium of Chromatographic Behavior of Post-translationally and Chemically Modified Peptides in Bottom-Up Proteomic Experiments.

Autor: Neale Q; Department of Chemistry, University of Manitoba, 360 Parker Building, Winnipeg R3T 2N2, Manitoba, Canada., Prefontaine A; Department of Chemistry, University of Manitoba, 360 Parker Building, Winnipeg R3T 2N2, Manitoba, Canada., Battellino T; Department of Chemistry, University of Manitoba, 360 Parker Building, Winnipeg R3T 2N2, Manitoba, Canada., Mizero B; Department of Chemistry, University of Manitoba, 360 Parker Building, Winnipeg R3T 2N2, Manitoba, Canada., Yeung D; Department of Biochemistry and Medical Genetics, University of Manitoba, 336 Basic Medical Sciences Building, 745 Bannatyne Avenue, Winnipeg R3E 0J9, Manitoba, Canada., Spicer V; Manitoba Centre for Proteomics and Systems Biology, University of Manitoba, 799 JBRC, 715 McDermot Avenue, Winnipeg R3E 3P4, Manitoba, Canada., Budisa N; Department of Chemistry, University of Manitoba, 360 Parker Building, Winnipeg R3T 2N2, Manitoba, Canada., Perreault H; Department of Chemistry, University of Manitoba, 360 Parker Building, Winnipeg R3T 2N2, Manitoba, Canada., Zahedi RP; Department of Biochemistry and Medical Genetics, University of Manitoba, 336 Basic Medical Sciences Building, 745 Bannatyne Avenue, Winnipeg R3E 0J9, Manitoba, Canada.; Manitoba Centre for Proteomics and Systems Biology, University of Manitoba, 799 JBRC, 715 McDermot Avenue, Winnipeg R3E 3P4, Manitoba, Canada.; Department of Internal Medicine, University of Manitoba, 799 JBRC, 715 McDermot Avenue, Winnipeg R3E 3P4, Manitoba, Canada.; CancerCare Manitoba Research Institute, 675 McDermot Avenue, Winnipeg R3E 0 V9, Manitoba, Canada., Krokhin OV; Department of Biochemistry and Medical Genetics, University of Manitoba, 336 Basic Medical Sciences Building, 745 Bannatyne Avenue, Winnipeg R3E 0J9, Manitoba, Canada.; Manitoba Centre for Proteomics and Systems Biology, University of Manitoba, 799 JBRC, 715 McDermot Avenue, Winnipeg R3E 3P4, Manitoba, Canada.; Department of Internal Medicine, University of Manitoba, 799 JBRC, 715 McDermot Avenue, Winnipeg R3E 3P4, Manitoba, Canada.

Publikováno v: Analytical chemistry [Anal Chem] 2023 Oct 03; Vol. 95 (39), pp. 14634-14642. Date of Electronic Publication: 2023 Sep 22.

Reversed-Phase Liquid Chromatography of Peptides for Bottom-Up Proteomics: A Tutorial.

Autor: Lenčo J; Department of Analytical Chemistry, Faculty of Pharmacy in Hradec Králové, Charles University, Heyrovského 1203/8, 500 05Hradec Králové, Czech Republic., Jadeja S; Department of Analytical Chemistry, Faculty of Pharmacy in Hradec Králové, Charles University, Heyrovského 1203/8, 500 05Hradec Králové, Czech Republic., Naplekov DK; Department of Analytical Chemistry, Faculty of Pharmacy in Hradec Králové, Charles University, Heyrovského 1203/8, 500 05Hradec Králové, Czech Republic., Krokhin OV; Department of Internal Medicine, Manitoba Centre for Proteomics and Systems Biology, University of Manitoba, 799 JBRC, 715 McDermot Avenue, WinnipegR3E 3P4, Manitoba, Canada., Khalikova MA; Department of Analytical Chemistry, Faculty of Pharmacy in Hradec Králové, Charles University, Heyrovského 1203/8, 500 05Hradec Králové, Czech Republic., Chocholouš P; Department of Analytical Chemistry, Faculty of Pharmacy in Hradec Králové, Charles University, Heyrovského 1203/8, 500 05Hradec Králové, Czech Republic., Urban J; Department of Chemistry, Faculty of Science, Masaryk University, Kamenice 5, 625 00Brno, Czech Republic., Broeckhoven K; Department of Chemical Engineering (CHIS), Faculty of Engineering, Vrije Universiteit Brussel, Pleinlaan 2, 1050Brussel, Belgium., Nováková L; Department of Analytical Chemistry, Faculty of Pharmacy in Hradec Králové, Charles University, Heyrovského 1203/8, 500 05Hradec Králové, Czech Republic., Švec F; Department of Analytical Chemistry, Faculty of Pharmacy in Hradec Králové, Charles University, Heyrovského 1203/8, 500 05Hradec Králové, Czech Republic.

Publikováno v: Journal of proteome research [J Proteome Res] 2022 Dec 02; Vol. 21 (12), pp. 2846-2892. Date of Electronic Publication: 2022 Nov 10.