Zobrazeno 1 - 10
of 89
pro vyhledávání: '"O'Connor, Martin J."'
Autor:
O'Connor, Martin J., Hardi, Josef, Martínez-Romero, Marcos, Somasundaram, Sowmya, Honick, Brendan, Fisher, Stephen A., Pillai, Ajay, Musen, Mark A.
Scientists increasingly recognize the importance of providing rich, standards-adherent metadata to describe their experimental results. Despite the availability of sophisticated tools to assist in the process of data annotation, investigators general
Externí odkaz:
http://arxiv.org/abs/2409.08897
Autor:
O'Connor, Martin J., Martínez-Romero, Marcos, Akdogan, Mete Ugur, Hardi, Josef, Musen, Mark A.
While scientists increasingly recognize the importance of metadata in describing their data, spreadsheets remain the preferred tool for supplying this information despite their limitations in ensuring compliance and quality. Various tools have been d
Externí odkaz:
http://arxiv.org/abs/2312.09107
Autor:
Musen, Mark A., O'Connor, Martin J., Schultes, Erik, Martinez-Romero, Marcos, Hardi, Josef, Graybeal, John
It is challenging to determine whether datasets are findable, accessible, interoperable, and reusable (FAIR) because the FAIR Guiding Principles refer to highly idiosyncratic criteria regarding the metadata used to annotate datasets. Specifically, th
Externí odkaz:
http://arxiv.org/abs/2208.02836
Autor:
Gonçalves, Rafael S., O'Connor, Martin J., Martínez-Romero, Marcos, Egyedi, Attila L., Willrett, Debra, Graybeal, John, Musen, Mark A.
The Center for Expanded Data Annotation and Retrieval (CEDAR) aims to revolutionize the way that metadata describing scientific experiments are authored. The software we have developed--the CEDAR Workbench--is a suite of Web-based tools and REST APIs
Externí odkaz:
http://arxiv.org/abs/1905.06480
Autor:
Martínez-Romero, Marcos, O'Connor, Martin J., Egyedi, Attila L., Willrett, Debra, Hardi, Josef, Graybeal, John, Musen, Mark A.
Metadata-the machine-readable descriptions of the data-are increasingly seen as crucial for describing the vast array of biomedical datasets that are currently being deposited in public repositories. While most public repositories have firm requireme
Externí odkaz:
http://arxiv.org/abs/1903.09270
Autor:
Gonçalves, Rafael S., O'Connor, Martin J., Martínez-Romero, Marcos, Graybeal, John, Musen, Mark A.
The metadata about scientific experiments are crucial for finding, reproducing, and reusing the data that the metadata describe. We present a study of the quality of the metadata stored in BioSample--a repository of metadata about samples used in bio
Externí odkaz:
http://arxiv.org/abs/1708.01286
Autor:
Martinez-Romero, Marcos, Jonquet, Clement, O'Connor, Martin J., Graybeal, John, Pazos, Alejandro, Musen, Mark A.
Publikováno v:
Journal of Biomedical Semantics 8 (2017) 1-22
Biomedical researchers use ontologies to annotate their data with ontology terms, enabling better data integration and interoperability. However, the number, variety and complexity of current biomedical ontologies make it cumbersome for researchers t
Externí odkaz:
http://arxiv.org/abs/1611.05973
Publikováno v:
In International Journal of Medical Informatics 2009 78 Supplement 1:S77-S85
Autor:
O'Connor, Martin J, Warzel, Denise B, Martínez-Romero, Marcos, Hardi, Josef, Willrett, Debra, Egyedi, Attila L, Eftekhari, Aras, Graybeal, J, Musen, Mark A
Developing promising treatments in biomedicine often requires aggregation and analysis of data from disparate sources across the healthcare and research spectrum. To facilitate these approaches, there is a growing focus on supporting interoperation o
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::733b66c3ce629c2833a74ec893ba02cb
https://europepmc.org/articles/PMC7153094/
https://europepmc.org/articles/PMC7153094/