Metagenomic Analysis of the Indian Ocean Picocyanobacterial Community: Structure, Potential Function and Evolution.

Autor: Díez B; Department of Molecular Genetic and Microbiology, Faculty of Biological Sciences, Pontificia Universidad Católica de Chile, Alameda 340, Casilla 114-D, C.P. 651 3677, Santiago, Chile.; Science for Life Laboratory, Department of Ecology, Environment and Plant Sciences, Stockholm University, Box 1031, 171 21 Solna, Sweden.; Center for Climate Change and Resilience Research (CR)2, Santiago, Chile., Nylander JA; Science for Life Laboratory, Department of Ecology, Environment and Plant Sciences, Stockholm University, Box 1031, 171 21 Solna, Sweden.; BILS/Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Box 50003, SE-10405, Stockholm, Sweden., Ininbergs K; Science for Life Laboratory, Department of Ecology, Environment and Plant Sciences, Stockholm University, Box 1031, 171 21 Solna, Sweden., Dupont CL; Microbial and Environmental Genomics, J. Craig Venter Institute, San Diego, CA 92037, United States of America., Allen AE; Microbial and Environmental Genomics, J. Craig Venter Institute, San Diego, CA 92037, United States of America.; Integrative Oceanography Division, Scripps Institution of Oceanography, University of California San Diego, La Jolla, CA 92037, United States of America., Yooseph S; Informatics Group, J. Craig Venter Institute, San Diego, CA 92037, United States of America., Rusch DB; Informatics Group, J. Craig Venter Institute, Rockville, MD 20850, United States of America.; Center for Genomics and Bioinformatics, Indiana University, Bloomington, IN 47401, United States of America., Bergman B; Science for Life Laboratory, Department of Ecology, Environment and Plant Sciences, Stockholm University, Box 1031, 171 21 Solna, Sweden.

Publikováno v: PloS one [PLoS One] 2016 May 19; Vol. 11 (5), pp. e0155757. Date of Electronic Publication: 2016 May 19 (Print Publication: 2016).

Phylogeny, evolution and classification of gall wasps: the plot thickens.

Autor: Ronquist F; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden., Nieves-Aldrey JL; Departamento de Biodiversidad y Biología Evolutiva, Museo Nacional de Ciencias Naturales (CSIC), Madrid, Spain., Buffington ML; Systematic Entomology Lab, USDA, c/o Smithsonian Institution, Washington DC, United States of America., Liu Z; Department of Biological Sciences, Eastern Illinois University, Charleston, IL, United States of America., Liljeblad J; Swedish Species Information Centre, Swedish University of Agricultural Sciences, Uppsala, Sweden., Nylander JA; Department of Bioinformatics and Genetics, Swedish Museum of Natural History, Stockholm, Sweden; Bioinformatics Infrastructure for Life Sciences, Linköping University, Linköping, Sweden.

Publikováno v: PloS one [PLoS One] 2015 May 20; Vol. 10 (5), pp. e0123301. Date of Electronic Publication: 2015 May 20 (Print Publication: 2015).

Functional tradeoffs underpin salinity-driven divergence in microbial community composition.

Autor: Dupont CL; Microbial and Environmental Genomics, J. Craig Venter Institute, San Diego, California, United States of America., Larsson J; Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden., Yooseph S; Informatics Group, J. Craig Venter Institute, San Diego, California, United States of America., Ininbergs K; Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden., Goll J; Informatics Group, J. Craig Venter Institute, Rockville, Maryland, United States of America., Asplund-Samuelsson J; Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden., McCrow JP; Microbial and Environmental Genomics, J. Craig Venter Institute, San Diego, California, United States of America., Celepli N; Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden., Allen LZ; Microbial and Environmental Genomics, J. Craig Venter Institute, San Diego, California, United States of America., Ekman M; Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden., Lucas AJ; Marine Physical Laboratory, Scripps Institution of Oceanography, University of California San Diego, San Diego, California, United States of America., Hagström Å; Swedish Institute for the Marine Environment (SIME), University of Gothenburg, Gothenburg, Sweden., Thiagarajan M; Informatics Group, J. Craig Venter Institute, Rockville, Maryland, United States of America., Brindefalk B; Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden., Richter AR; Informatics Group, J. Craig Venter Institute, San Diego, California, United States of America., Andersson AF; KTH Royal Institute of Technology, Science for Life Laboratory, School of Biotechnology, Solna, Sweden., Tenney A; Informatics Group, J. Craig Venter Institute, San Diego, California, United States of America., Lundin D; KTH Royal Institute of Technology, Science for Life Laboratory, School of Biotechnology, Solna, Sweden., Tovchigrechko A; Informatics Group, J. Craig Venter Institute, Rockville, Maryland, United States of America., Nylander JA; Department of Biodiversity Informatics, Swedish Museum of Natural History, Stockholm, Sweden., Brami D; Informatics Group, J. Craig Venter Institute, San Diego, California, United States of America., Badger JH; Informatics Group, J. Craig Venter Institute, San Diego, California, United States of America., Allen AE; Microbial and Environmental Genomics, J. Craig Venter Institute, San Diego, California, United States of America., Rusch DB; Informatics Group, J. Craig Venter Institute, Rockville, Maryland, United States of America., Hoffman J; Microbial and Environmental Genomics, J. Craig Venter Institute, San Diego, California, United States of America., Norrby E; Center for History of Science, The Royal Swedish Academy of Sciences, Stockholm, Sweden., Friedman R; Microbial and Environmental Genomics, J. Craig Venter Institute, San Diego, California, United States of America., Pinhassi J; Centre for Ecology and Evolution in Microbial Model Systems, Linnaeus University, Kalmar, Sweden., Venter JC; Microbial and Environmental Genomics, J. Craig Venter Institute, San Diego, California, United States of America., Bergman B; Department of Ecology, Environment and Plant Sciences, Stockholm University, Stockholm, Sweden.

Publikováno v: PloS one [PLoS One] 2014 Feb 27; Vol. 9 (2), pp. e89549. Date of Electronic Publication: 2014 Feb 27 (Print Publication: 2014).

Genome fluctuations in cyanobacteria reflect evolutionary, developmental and adaptive traits.

Autor: Larsson J; Department of Botany, Stockholm University, SE-106 09 Stockholm, Sweden. john.larsson@botan.su.se, Nylander JA, Bergman B

Publikováno v: BMC evolutionary biology [BMC Evol Biol] 2011 Jun 30; Vol. 11, pp. 187. Date of Electronic Publication: 2011 Jun 30.

Tracing the impact of the Andean uplift on Neotropical plant evolution.

Autor: Antonelli A; Department of Plant and Environmental Sciences, University of Gothenburg, Box 461, 405 30 Gothenburg, Sweden. alexandre.antonelli@systbot.uzh.ch, Nylander JA, Persson C, Sanmartín I

Publikováno v: Proceedings of the National Academy of Sciences of the United States of America [Proc Natl Acad Sci U S A] 2009 Jun 16; Vol. 106 (24), pp. 9749-54. Date of Electronic Publication: 2009 May 22.