Utilizing genomic signatures to gain insights into the dynamics of SARS-CoV-2 through Machine and Deep Learning techniques

Autor: Ahmed M. A. Elsherbini, Amr Hassan Elkholy, Youssef M. Fadel, Gleb Goussarov, Ahmed Mohamed Elshal, Mohamed El-Hadidi, Mohamed Mysara

Publikováno v: BMC Bioinformatics, Vol 25, Iss 1, Pp 1-17 (2024)

Abstract The global spread of the SARS-CoV-2 pandemic, originating in Wuhan, China, has had profound consequences on both health and the economy. Traditional alignment-based phylogenetic tree methods for tracking epidemic dynamics demand substantial

Externí odkaz: https://doaj.org/article/5330f76900814a6c8b07bc8c6b632c2e

Circ-LocNet: A Computational Framework for Circular RNA Sub-Cellular Localization Prediction

Autor: Muhammad Nabeel Asim, Muhammad Ali Ibrahim, Muhammad Imran Malik, Andreas Dengel, Sheraz Ahmed

Publikováno v: International Journal of Molecular Sciences, Vol 23, Iss 15, p 8221 (2022)

Circular ribonucleic acids (circRNAs) are novel non-coding RNAs that emanate from alternative splicing of precursor mRNA in reversed order across exons. Despite the abundant presence of circRNAs in human genes and their involvement in diverse physiol

Externí odkaz: https://doaj.org/article/f243365c23ca43efa4c36fd29d8509a7

A Short Report on the Markov Property of DNA Sequences on 200-bp Genomic Units of ENCODE/Broad ChromHMM Annotations: A Computational Perspective

Autor: Hyun-Seok Park

Publikováno v: Genomics & Informatics, Vol 16, Iss 3, Pp 65-70 (2018)

The non-coding DNA in eukaryotic genomes encodes a language which programs chromatin accessibility, transcription factor binding, and various other activities. The objective of this short report was to determine the impact of primary DNA sequence on

Externí odkaz: https://doaj.org/article/c921462389404e27a3b02497fea6bd1c

Characterization of a Novel Mitovirus of the Sand Fly Lutzomyia longipalpis Using Genomic and Virus–Host Interaction Signatures

Autor: Paula Fonseca, Flavia Ferreira, Felipe da Silva, Liliane Santana Oliveira, João Trindade Marques, Aristóteles Goes-Neto, Eric Aguiar, Arthur Gruber

Publikováno v: Viruses, Vol 13, Iss 1, p 9 (2020)

Hematophagous insects act as the major reservoirs of infectious agents due to their intimate contact with a large variety of vertebrate hosts. Lutzomyia longipalpis is the main vector of Leishmania chagasi in the New World, but its role as a host of

Externí odkaz: https://doaj.org/article/97fbef7e79bb438db3cb69205855c672

Characterization of a Novel Mitovirus of the Sand Fly Lutzomyia longipalpis Using Genomic and Virus–Host Interaction Signatures

Autor: Arthur Gruber, Paula Luize Camargos Fonseca, Aristóteles Góes-Neto, João Trindade Marques, Flávia Gomes Faleiro Ferreira, Felipe Ferreira da Silva, Liliane Santana Oliveira, Eric R.G.R. Aguiar

Publikováno v: Viruses, Vol 13, Iss 9, p 9 (2021)
Viruses
Volume 13
Issue 1
Repositório Institucional da USP (Biblioteca Digital da Produção Intelectual)
Universidade de São Paulo (USP)
instacron:USP

Hematophagous insects act as the major reservoirs of infectious agents due to their intimate contact with a large variety of vertebrate hosts. Lutzomyia longipalpis is the main vector of Leishmania chagasi in the New World, but its role as a host of

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_dedup___::9565cd3338fdc2b4468d4db86f12d4b8
https://www.mdpi.com/1999-4915/13/1/9