Slaughtering processes impact microbial communities and antimicrobial resistance genes of pig carcasses.

Autor: Gaire TN; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA., Odland C; Pipestone Veterinary Services, Pipestone, MN, USA; Wholestone Farms, NE, USA., Zhang B; State Key Laboratory of Agricultural Microbiology, College of Animal Sciences and Veterinary Medicine, Huazhong Agricultural University, Wuhan 430070, China., Slizovskiy I; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA., Jorgenson B; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA., Wehri T; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA., Meneguzzi M; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA., Wass B; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA., Schuld J; Pipestone Applied Research, Pipestone, MN, USA., Hanson D; Pipestone Applied Research, Pipestone, MN, USA., Doster E; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA., Singer J; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA., Cannon J; Hormel Foods, Austin, MN, USA., Asmus A; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA; Hormel Foods, Austin, MN, USA., Ray T; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA., Dee S; Pipestone Applied Research, Pipestone, MN, USA., Nerem J; Pipestone Applied Research, Pipestone, MN, USA., Davies P; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA., Noyes NR; Department of Veterinary Population Medicine (VPM), College of Veterinary Medicine, University of Minnesota, Saint Paul, MN, USA. Electronic address: nnoyes@umn.edu.

Publikováno v: The Science of the total environment [Sci Total Environ] 2024 Oct 10; Vol. 946, pp. 174394. Date of Electronic Publication: 2024 Jun 30.

Scalable de novo classification of antibiotic resistance of Mycobacterium tuberculosis.

Autor: Serajian M; Department of Computer and Information Science and Engineering, University of Florida, 1889 Museum Road, Gainesville, Florida 32611, United States., Marini S; Department of Epidemiology, University of Florida, PO Box 100231, Gainesville, Florida 32601, United States., Alanko JN; Department of Computer Science, University of Helsinki, P.O. Box 4, Helsinki 00014, Finland., Noyes NR; Department of Veterinary Population Medicine, University of Minnesota, 1365 Gortner Avenue, St. Paul, Minnesota 55108, United States., Prosperi M; Department of Epidemiology, University of Florida, PO Box 100231, Gainesville, Florida 32601, United States., Boucher C; Department of Computer and Information Science and Engineering, University of Florida, 1889 Museum Road, Gainesville, Florida 32611, United States.

Publikováno v: Bioinformatics (Oxford, England) [Bioinformatics] 2024 Jun 28; Vol. 40 (Suppl 1), pp. i39-i47.

Exploring associations between the teat apex metagenome and Staphylococcus aureus intramammary infections in primiparous cows under organic directives.

Autor: Dean CJ; Department of Veterinary Population Medicine, University of Minnesota, St. Paul, Minnesota, USA., Peña-Mosca F; Department of Veterinary Population Medicine, University of Minnesota, St. Paul, Minnesota, USA., Ray T; Department of Veterinary Population Medicine, University of Minnesota, St. Paul, Minnesota, USA., Wehri TJ; Department of Animal Science, University of Minnesota, St. Paul, Minnesota, USA., Sharpe K; Department of Animal Science, University of Minnesota, St. Paul, Minnesota, USA., Antunes AM Jr; Department of Veterinary Population Medicine, University of Minnesota, St. Paul, Minnesota, USA., Doster E; Department of Veterinary Population Medicine, University of Minnesota, St. Paul, Minnesota, USA., Fernandes L; Department of Veterinary Sciences, Texas Tech University, Lubbock, Texas, USA., Calles VF; Department of Veterinary Population Medicine, University of Minnesota, St. Paul, Minnesota, USA., Bauman C; Department of Veterinary Population Medicine, University of Minnesota, St. Paul, Minnesota, USA., Godden S; Department of Veterinary Population Medicine, University of Minnesota, St. Paul, Minnesota, USA., Heins B; Department of Animal Science, University of Minnesota, St. Paul, Minnesota, USA., Pinedo P; Department of Animal Science, Colorado State University, Fort Collins, Colorado, USA., Machado VS; Department of Veterinary Sciences, Texas Tech University, Lubbock, Texas, USA., Caixeta LS; Department of Veterinary Population Medicine, University of Minnesota, St. Paul, Minnesota, USA., Noyes NR; Department of Veterinary Population Medicine, University of Minnesota, St. Paul, Minnesota, USA.

Publikováno v: Applied and environmental microbiology [Appl Environ Microbiol] 2024 Apr 17; Vol. 90 (4), pp. e0223423. Date of Electronic Publication: 2024 Mar 18.

Effect of castration timing and weaning strategy on the taxonomic and functional profile of ruminal bacteria and archaea of beef calves.

Autor: Diaz GR; Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, 55108, USA., Gaire TN; Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, 55108, USA., Ferm P; Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, 55108, USA., Case L; North Central Research and Outreach Center, Department of Animal Science, University of Minnesota, St. Paul, MN, 55108, USA., Caixeta LS; Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, 55108, USA., Goldsmith TJ; Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, 55108, USA., Armstrong J; Agricultural and Natural Resource Systems, University of Minnesota Extension, University of Minnesota, St. Paul, MN, 55108, USA., Noyes NR; Department of Veterinary Population Medicine, College of Veterinary Medicine, University of Minnesota, St. Paul, MN, 55108, USA. nnoyes@umn.edu.

Publikováno v: Animal microbiome [Anim Microbiome] 2023 Dec 01; Vol. 5 (1), pp. 61. Date of Electronic Publication: 2023 Dec 01.

Evaluating the effects of antimicrobial drug use on the ecology of antimicrobial resistance and microbial community structure in beef feedlot cattle.

Autor: Doster E; Department of Microbiology, Immunology, & Pathology, Colorado State University, Fort Collins, CO, United States.; Veterinary Education, Research, and Outreach Program, Texas A&M University, Canyon, TX, United States., Pinnell LJ; Veterinary Education, Research, and Outreach Program, Texas A&M University, Canyon, TX, United States., Noyes NR; Department of Veterinary Population Medicine, University of Minnesota, Minneapolis, MN, United States., Parker JK; Department of Microbiology, Immunology, & Pathology, Colorado State University, Fort Collins, CO, United States., Anderson CA; Department of Microbiology, Immunology, & Pathology, Colorado State University, Fort Collins, CO, United States., Booker CW; Feedlot Health Management Services, Okotoks, AB, Canada., Hannon SJ; Feedlot Health Management Services, Okotoks, AB, Canada., McAllister TA; Agriculture and Agri-Food Canada, Lethbridge, AB, Canada., Gow SP; Public Health Agency of Canada, Saskatoon, SK, Canada., Belk KE; Department of Microbiology, Immunology, & Pathology, Colorado State University, Fort Collins, CO, United States., Morley PS; Veterinary Education, Research, and Outreach Program, Texas A&M University, Canyon, TX, United States.

Publikováno v: Frontiers in microbiology [Front Microbiol] 2022 Dec 13; Vol. 13, pp. 970358. Date of Electronic Publication: 2022 Dec 13 (Print Publication: 2022).