Zobrazeno 1 - 10
of 1 371
pro vyhledávání: '"Non-model"'
Publikováno v:
BMC Bioinformatics, Vol 25, Iss S2, Pp 1-15 (2024)
Abstract Background Conventional differential gene expression analysis pipelines for non-model organisms require computationally expensive transcriptome assembly. We recently proposed an alternative strategy of directly aligning RNA-seq reads to a pr
Externí odkaz:
https://doaj.org/article/be4eff8e04bf4b17b00e898db06e75f0
Autor:
Elisa Boscari, Stefano Dalle Palle, Nicola Vitulo, Annalisa Scapolatiello, Luca Schiavon, Alessia Cariani, Chiara Papetti, Lorenzo Zane, Ilaria Anna Maria Marino, Leonardo Congiu
Publikováno v:
Scientific Reports, Vol 14, Iss 1, Pp 1-14 (2024)
Abstract The study of species groups in which the presence of interspecific hybridization or introgression phenomena is known or suspected involves analysing shared bi-parentally inherited molecular markers. Current methods are based on different cat
Externí odkaz:
https://doaj.org/article/53c475663d8a450dad097ceb33da44b4
Publikováno v:
Fungal Biology and Biotechnology, Vol 11, Iss 1, Pp 1-11 (2024)
Abstract Background Penicillium digitatum is a fungal plant pathogen that causes the green mold disease in harvested citrus fruits. Due to its economical relevance, many efforts have focused on the development of genetic engineering tools for this fu
Externí odkaz:
https://doaj.org/article/fadb118d49c244f9821388c56f9b93ad
Autor:
Sara Velasquez-Restrepo, Mariana Corrales Orozco, Nicolás D. Franco-Sierra, Juan M. Martínez-Cerón, Juan F. Díaz-Nieto
Publikováno v:
PeerJ, Vol 12, p e17887 (2024)
Background The Neotropics harbors the largest species richness of the planet; however, even in well-studied groups, there are potentially hundreds of species that lack a formal description, and likewise, many already described taxa are difficult to i
Externí odkaz:
https://doaj.org/article/6c242b40ebf244da854453c8d4c5a620
Autor:
Valentina Peona, Jacopo Martelossi, Dareen Almojil, Julia Bocharkina, Ioana Brännström, Max Brown, Alice Cang, Tomàs Carrasco-Valenzuela, Jon DeVries, Meredith Doellman, Daniel Elsner, Pamela Espíndola-Hernández, Guillermo Friis Montoya, Bence Gaspar, Danijela Zagorski, Paweł Hałakuc, Beti Ivanovska, Christopher Laumer, Robert Lehmann, Ljudevit Luka Boštjančić, Rahia Mashoodh, Sofia Mazzoleni, Alice Mouton, Maria Anna Nilsson, Yifan Pei, Giacomo Potente, Panagiotis Provataris, José Ramón Pardos-Blas, Ravindra Raut, Tomasa Sbaffi, Florian Schwarz, Jessica Stapley, Lewis Stevens, Nusrat Sultana, Radka Symonova, Mohadeseh S. Tahami, Alice Urzì, Heidi Yang, Abdullah Yusuf, Carlo Pecoraro, Alexander Suh
Publikováno v:
Mobile DNA, Vol 15, Iss 1, Pp 1-12 (2024)
Abstract Background The advancement of sequencing technologies results in the rapid release of hundreds of new genome assemblies a year providing unprecedented resources for the study of genome evolution. Within this context, the significance of in-d
Externí odkaz:
https://doaj.org/article/5b725ff7c4734dbd97e9756237a1869f
Autor:
Giulia Ravagnan, Jochen Schmid
Publikováno v:
Frontiers in Bioengineering and Biotechnology, Vol 12 (2024)
The development of sustainable processes is the most important basis to realize the shift from the fossil-fuel based industry to bio-based production. Non-model microbes represent a great resource due to their advantageous traits and unique repertoir
Externí odkaz:
https://doaj.org/article/d2af543145f040878b72f681902c5353
Autor:
Ricardo A. Cabeza, Ricardo Pérez-Díaz, Ramón Amigo, Sebastian Salinas-Roco, Amanda Morales-González, Alejandro del Pozo
Publikováno v:
Data in Brief, Vol 55, Iss , Pp 110644- (2024)
It is expected that CO2 concentration will increase in the air, thereby stimulating the photosynthesis process and, hence, plant biomass production. In the case of legumes, increased biomass due to higher CO2 concentration can stimulate atmospheric n
Externí odkaz:
https://doaj.org/article/9b8cf4c1f59a4acab05c57069264e2c2
Publikováno v:
Evolutionary Applications, Vol 17, Iss 7, Pp n/a-n/a (2024)
Abstract DNA cytosine methylation is an important epigenetic mechanism in genomic DNA. In most land plants, it is absent in the chloroplast DNA. We detected methylation in the chloroplast DNA of the kelp Saccharina latissima, a non‐model macroalgal
Externí odkaz:
https://doaj.org/article/56af7a8f44724f5980b1977376492e4d
Publikováno v:
Synthetic and Systems Biotechnology, Vol 8, Iss 3, Pp 498-508 (2023)
High-quality genome-scale metabolic models (GEMs) could play critical roles on rational design of microbial cell factories in the classical Design-Build-Test-Learn cycle of synthetic biology studies. Despite of the constant establishment and update o
Externí odkaz:
https://doaj.org/article/e5e155de0cb7456cb4609b2bfff0b1da
Autor:
Meghana Hosahalli Shivananda Murthy, Paniz Jasbi, Whitney Lowe, Lokender Kumar, Monsurat Olaosebikan, Liza Roger, Jinkyu Yang, Nastassja Lewinski, Noah Daniels, Lenore Cowen, Judith Klein-Seetharaman
Publikováno v:
PeerJ, Vol 12, p e16804 (2024)
Once thought to be a unique capability of the Langerhans islets in the pancreas of mammals, insulin (INS) signaling is now recognized as an evolutionarily ancient function going back to prokaryotes. INS is ubiquitously present not only in humans but
Externí odkaz:
https://doaj.org/article/71409e76452a49e694d22cc02bb5531d