Molecular Epidemiology and AMR Perspective of Diarrhoeagenic Escherichia coli in Africa: A Systematic Review and Meta-analysis.

Autor: Kalule JB; Makerere University, College of Veterinary Medicine Animal Resources and Biosecurity (CoVAB), Biotechnical and Diagnostic Sciences, Kampala, Uganda. kaluleb@gmail.com., Bester LA; Biomedical Resource Unit, College of Health Sciences, University of KwaZulu-Natal ZA, Westville, South Africa.; Department of Biochemistry and Microbiology, Faculty of Science, Engineering and Agriculture, University of Venda, Limpopo, South Africa., Banda DL; Department of Medical Laboratory Sciences, School of Life Sciences and Allied Health Professions, Kamuzu University of Health Sciences, Mzimba, Malawi., Derra FA; Food Safety and Food Microbiology National Reference Laboratory, Food Science and Nutrition Research Directorate, Ethiopian Public Health Institute, Addis Ababa, Ethiopia., Msefula C; Africa Centres for Disease Control and Prevention, African Union, Addis Ababa, Ethiopia.; Kamuzu University of Health Sciences, Blantyre, Malawi., Smith AM; Department of Infection Biology, London School of Hygiene and Tropical Medicine, London, UK.; Centre for Enteric Diseases, Division of the National Health Laboratory Service, National Institute for Communicable Diseases, Johannesburg, South Africa.; Department of Medical Microbiology, School of Medicine, Faculty of Health Sciences, University of Pretoria, Pretoria, South Africa., Ajayi A; Molecular Biology and Biotechnology Department, Nigerian Institute of Medical Research (NIMR), Yaba Lagos, Nigeria., Kumburu H; Kilimanjaro Clinical Research Institute, Moshi, Tanzania.; Kilimanjaro Christian Medical Centre, Moshi, Tanzania.; Kilimanjaro Christian Medical University College, Moshi, Tanzania., Kwenda G; Department of Biomedical Sciences, School of Health Sciences, University of Zambia, Lusaka, Zambia., Yamba K; University Teaching Hospitals, Lusaka, Zambia.; Zambia National Public Health Institute, Lusaka, Zambia., Mwaba J; Department of Pathology and Microbiology, University Teaching Hospital, Lusaka, Zambia.; Institute of Basic and Biomedical Sciences, Levy Mwanawasa Medical University, Lusaka, Zambia., Fakim YJ; University of Mauritius, Reduit, Mauritius., Sithole N; Africa CDC, Addis Ababa, Ethiopia., Kanzi AM; African Society for Laboratory Medicine (ASLM), Johannesburg, South Africa., Njage PMK; Research Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kongens Lyngby, Denmark., Chikuse F; Africa Centres for Disease Control and Prevention, African Union, Addis Ababa, Ethiopia.; Kamuzu University of Health Sciences, Blantyre, Malawi., Tessema SK; Africa Centres for Disease Control and Prevention, African Union, Addis Ababa, Ethiopia.; Kamuzu University of Health Sciences, Blantyre, Malawi., Smith SI; Molecular Biology and Biotechnology Department, Nigerian Institute of Medical Research (NIMR), Yaba Lagos, Nigeria., Foster-Nyarko E; Department of Infection Biology, London School of Hygiene and Tropical Medicine, London, UK.; Centre for Enteric Diseases, Division of the National Health Laboratory Service, National Institute for Communicable Diseases, Johannesburg, South Africa.

Publikováno v: Journal of epidemiology and global health [J Epidemiol Glob Health] 2024 Oct 14. Date of Electronic Publication: 2024 Oct 14.

Predicting Listeria monocytogenes virulence potential using whole genome sequencing and machine learning.

Autor: Gmeiner A; National Food Institute, Technical University of Denmark, Research Group for Genomic Epidemiology, Kgs. Lyngby, Denmark. Electronic address: algm@food.dtu.dk., Njage PMK; National Food Institute, Technical University of Denmark, Research Group for Genomic Epidemiology, Kgs. Lyngby, Denmark., Hansen LT; National Food Institute, Technical University of Denmark, Research Group for Food Microbiology and Hygiene, Kgs. Lyngby, Denmark., Aarestrup FM; National Food Institute, Technical University of Denmark, Research Group for Genomic Epidemiology, Kgs. Lyngby, Denmark., Leekitcharoenphon P; National Food Institute, Technical University of Denmark, Research Group for Genomic Epidemiology, Kgs. Lyngby, Denmark.

Publikováno v: International journal of food microbiology [Int J Food Microbiol] 2024 Jan 30; Vol. 410, pp. 110491. Date of Electronic Publication: 2023 Nov 17.

An Overview of Antimicrobial Resistance Profiles of Publicly Available Salmonella Genomes with Sufficient Quality and Metadata.

Autor: Nuanmuang N; Research Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kgs. Lyngby, Denmark., Leekitcharoenphon P; Research Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kgs. Lyngby, Denmark., Njage PMK; Research Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kgs. Lyngby, Denmark., Gmeiner A; Research Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kgs. Lyngby, Denmark., Aarestrup FM; Research Group for Genomic Epidemiology, National Food Institute, Technical University of Denmark, Kgs. Lyngby, Denmark.

Publikováno v: Foodborne pathogens and disease [Foodborne Pathog Dis] 2023 Sep; Vol. 20 (9), pp. 405-413. Date of Electronic Publication: 2023 Aug 04.

The Microbial Genetic Diversity and Succession Associated with Processing Waters at Different Broiler Processing Stages in an Abattoir in Australia.

Autor: Gichure JN; Department of Consumer and Food Sciences, University of Pretoria, Hatfield 0028, South Africa.; Department of Food Science, Nutrition and Technology, South Eastern Kenya University, Kitui P.O. Box 170-90200, Kenya., Coorey R; School of Molecular and Life Sciences, Faculty of Science and Engineering, Curtin University, Perth 6845, Australia., Njage PMK; Division for Epidemiology and Microbial Genomics, National Food Institute, Technical University of Denmark, 2800 Kongens Lyngby, Denmark., Dykes GA; School of Agriculture and Food Sciences, University of Queensland, St. Lucia 4067, Australia., Muema EK; Department of Biochemistry, Genetics and Microbiology, Forestry and Agricultural Biotechnology Institute (FABI), University of Pretoria, Hatfield 0028, South Africa., Buys EM; Department of Consumer and Food Sciences, University of Pretoria, Hatfield 0028, South Africa.

Publikováno v: Pathogens (Basel, Switzerland) [Pathogens] 2023 Mar 20; Vol. 12 (3). Date of Electronic Publication: 2023 Mar 20.

Potential Influence of Regulation of the Food Value Chain on Prevalence and Patterns of Antimicrobial Resistance: the Case of Tilapia (Oreochromis niloticus).

Autor: Onjong HA; Department of Food Science and Technology, Technical University of Kenya, Nairobi, Kenya., Ntuli V; Department of Biology, National University of Lesotho, Roma, Lesotho., Wambui J; Institute for Food Safety and Hygiene, University of Zurich, Zurich, Switzerland., Mwaniki M; Department of Food Science and Technology, Technical University of Kenya, Nairobi, Kenya., Njage PMK; Division for Global Surveillance, Research Group for Genomic Epidemiology, Technical University of Denmarkgrid.5170.3, Kongens Lyngby, Denmark.

Publikováno v: Applied and environmental microbiology [Appl Environ Microbiol] 2021 Nov 10; Vol. 87 (23), pp. e0094521. Date of Electronic Publication: 2021 Sep 22.