Zobrazeno 1 - 10
of 22
pro vyhledávání: '"Nives, Škunca"'
Publikováno v:
PLoS Computational Biology, Vol 11, Iss 5, p e1004095 (2015)
Horizontal or Lateral Gene Transfer (HGT or LGT) is the transmission of portions of genomic DNA between organisms through a process decoupled from vertical inheritance. In the presence of HGT events, different fragments of the genome are the result o
Externí odkaz:
https://doaj.org/article/67cc5dff41b241f8bc2a3f2531befc50
Autor:
Nives Škunca, Christophe Dessimoz
Publikováno v:
PLoS ONE, Vol 10, Iss 2, p e0114701 (2015)
Phylogenetic profiling is a well-established approach for predicting gene function based on patterns of gene presence and absence across species. Much of the recent developments have focused on methodological improvements, but relatively little is kn
Externí odkaz:
https://doaj.org/article/5c2fd13a4a954330ad6458597fa0522c
Publikováno v:
PLoS ONE, Vol 6, Iss 7, p e21800 (2011)
Outcomes of high-throughput biological experiments are typically interpreted by statistical testing for enriched gene functional categories defined by the Gene Ontology (GO). The resulting lists of GO terms may be large and highly redundant, and thus
Externí odkaz:
https://doaj.org/article/8810d369a0334ac7a815bb512de201a8
Autor:
Christophe Dessimoz, Nives Škunca
Publikováno v:
Methods in Molecular Biology ISBN: 9781493937417
The Gene Ontology Handbook
The Gene Ontology Handbook
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c4d40eccd21637a09aa4eeeb55cadb92
https://doi.org/10.1007/978-1-4939-3743-1
https://doi.org/10.1007/978-1-4939-3743-1
Publikováno v:
Methods in Molecular Biology, 1446
The Gene Ontology Handbook
Methods in Molecular Biology ISBN: 9781493937417
The Gene Ontology Handbook
Methods in Molecular Biology ISBN: 9781493937417
Two avenues to understanding gene function are complementary and often overlapping: experimental work and computational prediction. While experimental annotation generally produces high-quality annotations, it is low throughput. Conversely, computati
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::e3472b47c7baf08deef64360aac4f7ff
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 1446
Two avenues to understanding gene function are complementary and often overlapping: experimental work and computational prediction. While experimental annotation generally produces high-quality annotations, it is low throughput. Conversely, computati
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::5e792849db594df630b1bd69906ddb4f
https://pubmed.ncbi.nlm.nih.gov/27812938
https://pubmed.ncbi.nlm.nih.gov/27812938
Autor:
Fran, Supek, Nives, Škunca
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 1446
Contemporary techniques in biology produce readouts for large numbers of genes simultaneously, the typical example being differential gene expression measurements. Moreover, those genes are often richly annotated using GO terms that describe gene fun
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=pmid________::5d0eff4e5d1d96f29bac09526ad2c3af
https://pubmed.ncbi.nlm.nih.gov/27812945
https://pubmed.ncbi.nlm.nih.gov/27812945
Autor:
Nives Škunca, Fran Supek
Publikováno v:
Methods in Molecular Biology ISBN: 9781493937417
Contemporary techniques in biology produce readouts for large numbers of genes simultaneously, the typical example being differential gene expression measurements. Moreover, those genes are often richly annotated using GO terms that describe gene fun
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3b3dc883cdb30081a83f2e32fb925f82
https://doi.org/10.1007/978-1-4939-3743-1_15
https://doi.org/10.1007/978-1-4939-3743-1_15
Publikováno v:
Methods in molecular biology, vol. 1446, pp. 25-37
Methods in Molecular Biology ISBN: 9781493937417
Methods in Molecular Biology ISBN: 9781493937417
The Gene Ontology (GO) project is the largest resource for cataloguing gene function. The combination of solid conceptual underpinnings and a practical set of features have made the GO a widely adopted resource in the research community and an essent
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::f1db0a4f2801fb91316eb18c060a5fb7
http://arxiv.org/abs/1602.01876
http://arxiv.org/abs/1602.01876
Autor:
Suzanna E. Lewis, Gemma L. Holliday, Frederic B. Bastian, Sylvain Poux, Sandra Orchard, Nives Škunca, Pascale Gaudet, Michelle G. Giglio, Anne Niknejad, Marc Robinson-Rechavi, Marcus C. Chibucos, Hong Huang
Publikováno v:
Database, vol. 2015, pp. bav043
Database: The Journal of Biological Databases and Curation
Database, Vol. 2015 (2015) P. bav043
Database, 2015
Database: The Journal of Biological Databases and Curation
Database, Vol. 2015 (2015) P. bav043
Database, 2015
Biocuration has become a cornerstone for analyses in biology, and to meet needs, the amount of annotations has considerably grown in recent years. However, the reliability of these annotations varies; it has thus become necessary to be able to assess
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::cf19dde32c1b743930bf52c2aa68f5c8
https://serval.unil.ch/resource/serval:BIB_60CACFAC405E.P001/REF.pdf
https://serval.unil.ch/resource/serval:BIB_60CACFAC405E.P001/REF.pdf