Výsledky vyhledávání - "Nishank Raisinghani"

Akademický článek

AlphaFold2 Modeling and Molecular Dynamics Simulations of the Conformational Ensembles for the SARS-CoV-2 Spike Omicron JN.1, KP.2 and KP.3 Variants: Mutational Profiling of Binding Energetics Reveals Epistatic Drivers of the ACE2 Affinity and Escape Hotspots of Antibody Resistance

Autor: Nishank Raisinghani, Mohammed Alshahrani, Grace Gupta, Gennady Verkhivker

Publikováno v: Viruses, Vol 16, Iss 9, p 1458 (2024)

The most recent wave of SARS-CoV-2 Omicron variants descending from BA.2 and BA.2.86 exhibited improved viral growth and fitness due to convergent evolution of functional hotspots. These hotspots operate in tandem to optimize both receptor binding fo

Externí odkaz: https://doaj.org/article/2da3d9dd887a4b75acf443c11bfd8788

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Finding the Most Effective Data Augmentation Techniques on Brain MRI Data Using Deep Networks

Autor: Nishank Raisinghani

Externí odkaz: https://explore.openaire.eu/search/publication?articleId=doi_________::439b53168a7cb13d76ce859e00c8a2f1
https://doi.org/10.47611/harp.264

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Akademický článek

Predicting Mutation-Induced Allosteric Changes in Structures and Conformational Ensembles of the ABL Kinase Using AlphaFold2 Adaptations with Alanine Sequence Scanning.

Autor: Raisinghani, Nishank¹ (AUTHOR) nishankr@stanford.edu, Alshahrani, Mohammed¹ (AUTHOR) alshahrani@chapman.edu, Gupta, Grace¹ (AUTHOR) grgupta@chapman.edu, Verkhivker, Gennady^1,2 (AUTHOR) verkhivk@chapman.edu

Publikováno v: International Journal of Molecular Sciences. Sep2024, Vol. 25 Issue 18, p10082. 24p.

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Autor: Raisinghani, Nishank^1,2 (AUTHOR) rai.r.nick@gmail.com, Alshahrani, Mohammed¹ (AUTHOR) alshahrani@chapman.edu, Gupta, Grace¹ (AUTHOR) grgupta@chapman.edu, Verkhivker, Gennady^1,3 (AUTHOR) verkhivk@chapman.edu

Publikováno v: Viruses (1999-4915). Sep2024, Vol. 16 Issue 9, p1458. 37p.

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Akademický článek

Ensemble-Based Mutational Profiling and Network Analysis of the SARS-CoV-2 Spike Omicron XBB Lineages for Interactions with the ACE2 Receptor and Antibodies: Cooperation of Binding Hotspots in Mediating Epistatic Couplings Underlies Binding Mechanism and Immune Escape

Autor: Raisinghani, Nishank¹ (AUTHOR) rai.r.nick@gmail.com, Alshahrani, Mohammed¹ (AUTHOR) alshahrani@chapman.edu, Gupta, Grace¹ (AUTHOR) grgupta@chapman.edu, Verkhivker, Gennady^1,2 (AUTHOR) verkhivk@chapman.edu

Publikováno v: International Journal of Molecular Sciences. Apr2024, Vol. 25 Issue 8, p4281. 28p.

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Publikováno v: Physical Chemistry Chemical Physics (PCCP); 7/7/2024, Vol. 26 Issue 25, p17409-17422, 14p

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Akademický článek

Exploring conformational landscapes and binding mechanisms of convergent evolution for the SARS-CoV-2 spike Omicron variant complexes with the ACE2 receptor using AlphaFold2-based structural ensembles and molecular dynamics simulations.

Autor: Raisinghani, Nishank, Alshahrani, Mohammed, Gupta, Grace, Xiao, Sian, Tao, Peng, Verkhivker, Gennady

Publikováno v: Physical Chemistry Chemical Physics (PCCP); 7/7/2024, Vol. 26 Issue 25, p17720-17744, 25p

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