Zobrazeno 1 - 10
of 19
pro vyhledávání: '"Niran, Abeygunawardena"'
Autor:
Tomasz Adamusiak, Anjan Sharma, Faisal I. Rezwan, Sudeshna Guha Neogi, Pavel Kurnosov, Susanna-Assunta Sansone, Xiangqun Zheng Bradley, Nataliya Sklyar, Ekaterina Pilicheva, Tim F. Rayner, Richard M.R. Coulson, Gabriella Rustici, Miroslaw Dylag, Ugis Sarkans, Eamonn Maguire, Ibrahim Emam, Mohammadreza Shojatalab, Marco Brandizi, Hugo Bérubé, James Malone, Philippe Rocca-Serra, Margus Lukk, Helen Parkinson, Roby Mani, Ele Holloway, Misha Kapushesky, Anna Farne, Eleanor Williams, Niran Abeygunawardena, Nikolay Kolesnikov, Tony Burdett, Mengyao Zhao, Alvis Brazma, Maria Krestyaninova
Publikováno v:
Nucleic Acids Research
ArrayExpress http://www.ebi.ac.uk/arrayexpress consists of three components: the ArrayExpress Repository--a public archive of functional genomics experiments and supporting data, the ArrayExpress Warehouse--a database of gene expression profiles and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::5e07b01053767aed8e315532e69d299e
http://europepmc.org/articles/PMC2686529
http://europepmc.org/articles/PMC2686529
Autor:
Nikolay Kolesnykov, Ele Holloway, Anjan Sharma, E. William, Roby Mani, Anna Farne, Helen Parkinson, Misha Kapushesky, P. Lilja, Niran Abeygunawardena, Tim F. Rayner, Mohammadreza Shojatalab, Richard M.R. Coulson, Margus Lukk, Ugis Sarkans, Alvis Brazma
Publikováno v:
Nucleic Acids Research
UNLABELLED ArrayExpress is a public database for high throughput functional genomics data. ArrayExpress consists of two parts--the ArrayExpress Repository, which is a MIAME supportive public archive of microarray data, and the ArrayExpress Data Wareh
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::0f58a795e2dd3868ac94e3e0fbb4aa02
http://europepmc.org/articles/PMC1716725
http://europepmc.org/articles/PMC1716725
Autor:
Per Lilja, Ele Holloway, Sergio Contrino, Anna Farne, Gaurab Mukherjee, Tim F. Rayner, Helen Parkinson, Mohammadreza Shojatalab, Yves Moreau, Niran Abeygunawardena, Ugis Sarkans, Alvis Brazma, Steffen Durinck, Anjan Sharma, Ahmet Oezcimen
Publikováno v:
Plant Physiology. 139:632-636
ArrayExpress is a public microarray repository founded on the Minimum Information About a Microarray Experiment (MIAME) principles that stores MIAME-compliant gene expression data. Plant-based data sets represent approximately one-quarter of the expe
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::29e9788b350d2e63d5cbf8f77f7b3978
https://doi.org/10.1104/pp.105.063156
https://doi.org/10.1104/pp.105.063156
Autor:
Susanna-Assunta Sansone, Ugis Sarkans, Ele Holloway, Jaak Vilo, Helen Parkinson, Gaurab Mukherjee, Misha Kapushesky, Philippe Rocca-Serra, Gonzalo Garcia Lara, Patrick Kemmeren, Alvis Brazma, Sergio Contrino, Ahmet Oezcimen, Niran Abeygunawardena, Mohammadreza Shojatalab
Publikováno v:
Comptes Rendus Biologies. 326:1075-1078
ArrayExpress is a public repository for microarray-based gene expression data, resulting from the implementation of the MAGE object model to ensure accurate data structuring and the MIAME standard, which defines the annotation requirements. ArrayExpr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::36627f1aeefa7e726344bd10c9f08e2e
https://doi.org/10.1016/j.crvi.2003.09.026
https://doi.org/10.1016/j.crvi.2003.09.026
Autor:
Alvis, Brazma, Helen, Parkinson, Ugis, Sarkans, Mohammadreza, Shojatalab, Jaak, Vilo, Niran, Abeygunawardena, Ele, Holloway, Misha, Kapushesky, Patrick, Kemmeren, Gonzalo Garcia, Lara, Ahmet, Oezcimen, Philippe, Rocca-Serra, Susanna-Assunta, Sansone
Publikováno v:
Nucleic Acids Research. 31:68-71
ArrayExpress is a new public database of microarray gene expression data at the EBI, which is a generic gene expression database designed to hold data from all microarray platforms. ArrayExpress uses the annotation standard Minimum Information About
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7dd8b1e3028d2e83af0a883ed87db6ea
https://doi.org/10.1093/nar/gkg091
https://doi.org/10.1093/nar/gkg091
Autor:
James Malone, Miroslaw Dylag, Marco Brandizi, Margus Lukk, Anjan Sharma, Alvis Brazma, Roby Mani, Natalja Kurbatova, Eleanor Williams, Niran Abeygunawardena, Gabriella Rustici, Ekaterina Pilicheva, Tomasz Adamusiak, Ele Holloway, Emma Hastings, Ibrahim Emam, Tony Burdett, Anna Farne, Nikolay Kolesnikov, Ugis Sarkans, Helen Parkinson, Nataliya Sklyar
Publikováno v:
Nucleic Acids Research
The ArrayExpress Archive (http://www.ebi.ac.uk/arrayexpress) is one of the three international public repositories of functional genomics data supporting publications. It includes data generated by sequencing or array-based technologies. Data are sub
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::4a24d77e4209e0d27ed1138bb7238b04
https://doi.org/10.1093/nar/gkq1040
https://doi.org/10.1093/nar/gkq1040
Autor:
K. Joeri van der Velde, Despoina Antonakaki, Morris A. Swertz, Helen Parkinson, Niran Abeygunawardena, Tomasz Adamusiak, Tony Burdett, Misha Kapushesky, Natalja Kurbatova
Publikováno v:
BMC Bioinformatics
Bmc Bioinformatics, 12:218. BioMed Central Ltd.
BMC Bioinformatics, Vol 12, Iss 1, p 218 (2011)
Bmc Bioinformatics, 12:218. BioMed Central Ltd.
BMC Bioinformatics, Vol 12, Iss 1, p 218 (2011)
Background Ontologies have become an essential asset in the bioinformatics toolbox and a number of ontology access resources are now available, for example, the EBI Ontology Lookup Service (OLS) and the NCBO BioPortal. However, these resources differ
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::8d8dda316813e64ccc23b02446065722
https://research.rug.nl/en/publications/7705126c-59a3-4d35-9e1f-d5e83016e4e3
https://research.rug.nl/en/publications/7705126c-59a3-4d35-9e1f-d5e83016e4e3
Autor:
Helen Parkinson, Tony Burdett, K. Joeri van der Velde, Niran Abeygunawardena, Morris A. Swertz, Despoina Antonakaki, Tomasz Adamusiak
Publikováno v:
Nature Precedings.
OntoCAT is an open source package developed to simplify the task of querying heterogeneous ontology resources. It supports local ontologies in OBO and OWL format as well as public repositories NCBO BioPortal and EBI Ontology Lookup Service (OLS). It
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::6979623981cdfd64abf99fc904809616
https://doi.org/10.1038/npre.2010.4666.1
https://doi.org/10.1038/npre.2010.4666.1
Autor:
Tomasz Adamusiak, Morris Swertz, Tony Burdett, K Joeri van der Velde, Niran Abeygunawardena, Despoina Antonakaki, Helen Parkinson
Publikováno v:
Nature Precedings.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::c3f7c5d97befa7ea774486095e85b8cf
https://doi.org/10.1038/npre.2010.4666
https://doi.org/10.1038/npre.2010.4666
Autor:
Ele Holloway, Anna Farne, Anjan Sharma, Gonzalo Garcia Lara, Gaurab Mukherjee, Sergio Contrino, Tim F. Rayner, Richard M.R. Coulson, Susanna-Assunta Sansone, Alvis Brazma, P. Lilja, Misha Kapushesky, Helen Parkinson, Ahmet Oezcimen, Philippe Rocca-Serra, Ugis Sarkans, Mohammadreza Shojatalab, Niran Abeygunawardena
Publikováno v:
Nucleic Acids Research
ArrayExpress is a new public database of microarray gene expression data at the EBI, which is a generic gene expression database designed to hold data from all microarray platforms. ArrayExpress uses the annotation standard Minimum Information About
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ea068917d70ec1069c6005aa0b8f6638
https://pubmed.ncbi.nlm.nih.gov/15608260
https://pubmed.ncbi.nlm.nih.gov/15608260