Zobrazeno 1 - 10
of 13
pro vyhledávání: '"Nina Thayer"'
Autor:
Nancy Hammon, Arthur Kobayashi, Stacey Black, Uffe Hellsten, Daniel S. Rokhsar, Lauren Haydu, Frederick Lopez, Nina Thayer, Diego Martinez, Mirian Denys, Paul Predki, Laurie Gordon, Eva Bajorek, Eidelyn Gonzales, Catherine Medina, Richard D. Nandkeshwar, Sanjay Israni, Richard M. Myers, Hope Tice, Jean F. Challacombe, Anne O. Olsen, Chenier Caoile, State Lowry, Alex Rodriguez, Paul G. Richardson, Kevin Wu, D. Scott, Xinwei She, Matthew Groza, James P. Noonan, Anna Ustaszewska, María Laura Ríos Gómez, Jane Grimwood, Jeremy Wheeler, Len A. Pennacchio, Martin O. Pollard, Tijana Glavina, Dea Fotopulos, Joel Martin, Heather Kimbal, Kristen Kadner, Dave Flowers, Joan Yang, Astrid Terry, Lucía Ramírez, Ming Tsai, Yee Man Chan, Michael R. Altherr, Susan Lucas, Jan Fang Cheng, Sam Pitluck, Sam Rash, Igor V. Grigoriev, Wayne Huang, Yunian Lou, Chris Detter, Shyam Prabhakar, James Priest, Angelica Salazar, Gary Xie, Nu Vo, Elbert Branscomb, Jamie Jett, Stephanie Rogers, David Goodstenin, Olivier Couronne, Julio Escobar, James Retterer, Mary Bao Tran-Gyamfi, Trevor Hawkins, Jeremy Schmutz, Evan E. Eichler, Andrea Aerts, Mark Dickson, Jenna Morgan, Edward M. Rubin, Asaf Salamov
Publikováno v:
Nature. 431:268-274
Chromosome 5 is one of the largest human chromosomes and contains numerous intrachromosomal duplications, yet it has one of the lowest gene densities. This is partially explained by numerous gene-poor regions that display a remarkable degree of nonco
Autor:
Christian P. Kubicek, Conrad L. Schoch, Cheryl R. Kuske, Igor V. Grigoriev, Isaac Ho, Nina Thayer, Astrid Terry, Nicholas H. Putnam, Dan Cullen, Bernard Henrissat, Michael D. Ward, Gary Xie, Monika Schmoll, Ann Westerholm-Parvinen, Melissa Jackson, Thomas Brettin, Etienne Danchin, Diego Martinez, Jon K. Magnuson, Markku Saloheimo, Jian Yao, Alfredo Lopez de Leon, Jarod Chapman, Ravi D. Barabote, David Bruce, Asaf Salamov, Paul L. Harris, Scott E. Baker, Olga Chertkov, Chris Detter, Susan Lucas, Paul G. Richardson, Mary Anne Nelson, Beth A. Nelson, Monica Misra, Pedro M. Coutinho, Sandy Merino, Nigel Dunn-Coleman, Luis F. Larrondo, Randy M. Berka, Edward M. Rubin, Mikko Arvas, Cliff Han, Daniel S. Rokhsar, Barbara Robbertse
Publikováno v:
Martinez, D, Berka, R M, Henrissat, B, Saloheimo, M, Arvas, M, Baker, S E, Chapman, J, Chertkov, O, Coutinho, P M, Cullen, D, Danchin, E G J, Grigoriev, I V, Harris, P, Jackson, M, Kubicek, C P, Han, C S, Ho, I, Larrondo, L F, De Leon, A L, Magnuson, J K, Merino, S, Misra, M, Nelson, B, Putnam, N, Robbertse, B, Salamov, A A, Schmoll, M, Terry, A, Thayer, N, Westerholm-Parvinen, A, Schoch, C L, Yao, J, Barabote, R, Nelson, M A, Detter, C, Bruce, D, Kuske, C R, Xie, G, Richardson, P, Rokhsar, D S, Lucas, S M, Rubin, E M, Dunn-Coleman, N, Ward, M & Brettin, T S 2008, ' Corrigendum: Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina) ', Nature Biotechnology, vol. 26, no. 10 . https://doi.org/10.1038/nbt1008-1193a
In the version of this article initially published, an author's name was misspelled as Barbote. The correct spelling is Barabote. The error has been corrected in the HTML and PDF versions of the article.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::309677a829541d54a15ac1a0dcaa2e61
https://cris.vtt.fi/en/publications/170eab86-05b4-468d-9428-bebfb76f55b4
https://cris.vtt.fi/en/publications/170eab86-05b4-468d-9428-bebfb76f55b4
Autor:
Chris Detter, Scott E. Baker, Cheryl R. Kuske, Nina Thayer, Randy M. Berka, Michael Ward, Igor V. Grigoriev, Conrad L. Schoch, Edward M. Rubin, Daniel S. Rokhsar, Isaac Ho, Alfredo Lopez de Leon, Susan Lucas, Barbara Robbertse, Paul G. Richardson, Mikko Arvas, Cliff Han, Monica Misra, Melissa Jackson, Beth Nelson, Luis F. Larrondo, Bernard Henrissat, Astrid Terry, Diego Martinez, Dan Cullen, Jarod Chapman, Etienne Danchin, Jian Yao, Gary Xie, Jon K. Magnuson, Thomas Brettin, Mary Anne Nelson, Nigel Dunn-Coleman, Asaf Salamov, David Bruce, Ann Westerholm-Parvinen, Nicholas H. Putnam, Monika Schmoll, Olga Chertkov, Pedro M. Coutinho, Sandy Merino, Paul Harris, Christian P. Kubicek, Markku Saloheimo, Ravi D. Barabote
Publikováno v:
Nature Biotechnology
Nature Biotechnology, 2008, 26, pp.553-560. ⟨10.1038/nbt1403⟩
Nature Biotechnology, Nature Publishing Group, 2008, 26, pp.553-560. ⟨10.1038/nbt1403⟩
Martinez, D, Berka, R M, Henrissat, B, Saloheimo, M, Arvas, M, Baker, S E, Chapman, J, Chertkov, O, Coutinho, P M, Cullen, D, Danchin, E G J, Grigoriev, I V, Harris, P, Jackson, M, Kubicek, C P, Han, C S, Ho, I, Larrondo, L F, de Leon, A L, Magnuson, J K, Merino, S, Misra, M, Nelson, B, Putnam, N, Robbertse, B, Salamov, A A, Schmoll, M, Terry, A, Thayer, N, Westerholm-Parvinen, A, Schoch, C L, Yao, J, Barabote, R, Barbote, R, Nelson, M A, Detter, C, Bruce, D, Kuske, C R, Xie, G, Richardson, P, Rokhsar, D S, Lucas, S M, Rubin, E M, Dunn-Coleman, N, Ward, M & Brettin, T S 2008, ' Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina) ', Nature Biotechnology, vol. 26, no. 5, pp. 553-560 . https://doi.org/10.1038/nbt1403
Nature Biotechnology, 2008, 26, pp.553-560. ⟨10.1038/nbt1403⟩
Nature Biotechnology, Nature Publishing Group, 2008, 26, pp.553-560. ⟨10.1038/nbt1403⟩
Martinez, D, Berka, R M, Henrissat, B, Saloheimo, M, Arvas, M, Baker, S E, Chapman, J, Chertkov, O, Coutinho, P M, Cullen, D, Danchin, E G J, Grigoriev, I V, Harris, P, Jackson, M, Kubicek, C P, Han, C S, Ho, I, Larrondo, L F, de Leon, A L, Magnuson, J K, Merino, S, Misra, M, Nelson, B, Putnam, N, Robbertse, B, Salamov, A A, Schmoll, M, Terry, A, Thayer, N, Westerholm-Parvinen, A, Schoch, C L, Yao, J, Barabote, R, Barbote, R, Nelson, M A, Detter, C, Bruce, D, Kuske, C R, Xie, G, Richardson, P, Rokhsar, D S, Lucas, S M, Rubin, E M, Dunn-Coleman, N, Ward, M & Brettin, T S 2008, ' Genome sequencing and analysis of the biomass-degrading fungus Trichoderma reesei (syn. Hypocrea jecorina) ', Nature Biotechnology, vol. 26, no. 5, pp. 553-560 . https://doi.org/10.1038/nbt1403
International audience; Trichoderma reesei is the main industrial source of cellulases and hemicellulases used to depolymerize biomass to simple sugars that are converted to chemical intermediates and biofuels, such as ethanol. We assembled 89 scaffo
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::26bcbd461c3fcb777f64a0b1827045db
https://hal.inrae.fr/hal-02669177
https://hal.inrae.fr/hal-02669177
Autor:
Bernard Henrissat, Monica Misra, Paul Richardson, Mark J. McBride, Gary Xie, Thomas Brettin, Cliff Han, Susan Lucas, Paul Gilna, John C. Detter, Roxanne Tapia, David Wilson, Gerald Myers, Nina Thayer, Jean F. Challacombe, David Bruce, Linda S. Thompson, Olga Chertkov
Publikováno v:
Applied and environmental microbiology. 73(11)
The complete DNA sequence of the aerobic cellulolytic soil bacterium Cytophaga hutchinsonii , which belongs to the phylum Bacteroidetes , is presented. The genome consists of a single, circular, 4.43-Mb chromosome containing 3,790 open reading frames
Autor:
Thomas Brettin, A. Christine Munk, Linda Meincke, Lee Philip Reilly, Smriti S. Bhotika, Paul Keim, Stephanie Malfatti, Tijana Glavina, Nancy C. Brown, Jin Chen, Paul Gilna, Michael R. Altherr, B. Parson-Quintana, Nina Thayer, John J. Fawcett, Elizabeth Saunders, Cathy Cleland, Linda S. Thompson, Donna L. Robinson, Norman A. Doggett, Jon Longmire, Karen K. Hill, Kim McMurry, Lance D. Green, Bernice L. Moseman, Mark Mundt, Avinash Ramesh Kewalramani, Susan Lucas, Olga Chertkov, Penny Hitchcock, Patti L. Wills, Lynne Goodwin, Hope Tice, Jean F. Challacombe, Diego Martinez, Gary Xie, Roxanne Tapia, Lawrence O. Ticknor, Monica Misra, Mary L. Campbell, Paul Richardson, David Bruce, Connie S. Campbell, Paul J. Jackson, Cliff Han, Mira Dimitrijevic, Judith G. Tesmer, Richard T. Okinaka
Publikováno v:
Journal of bacteriology. 189(9)
Bacillus thuringiensis is an insect pathogen that is widely used as a biopesticide (E. Schnepf, N. Crickmore, J. Van Rie, D. Lereclus, J. Baum, J. Feitelson, D. R. Zeigler, and D. H. Dean, Microbiol. Mol. Biol. Rev. 62: 775-806, 1998). Here we report
Autor:
Thomas Brettin, Roxanne Tapia, J. Chris Detter, Thomas J. Inzana, David Bruce, Cliff Han, Paul Richardson, Gary Xie, Monica Misra, Olga Chertkov, Jean F. Challacombe, Nina Thayer, Alison J. Duncan
Publikováno v:
Journal of bacteriology. 189(5)
Haemophilus somnus can be either a commensal of bovine mucosal surfaces or an opportunistic pathogen. Pathogenic strains of H. somnus are a significant cause of systemic disease in cattle. We report the genome sequence of H. somnus 129Pt, a nonpathog
Autor:
Kimberly L. Mcmurray, James Retterer, Nancy C. Brown, Dea Fotopulos, Michael R. Altherr, Judith G. Tesmer, Jane Grimwood, Joel Martin, Jonathan L. Longmire, Elizabeth Saunders, P. Scott White, Malinda Stalvey, Elbert Branscomb, Norman A. Doggett, Nina Thayer, C.E. Hildebrand, Mary Bao Tran-Gyamfi, Yunian Lou, Trevor Hawkins, Lucía Ramírez, Shyam Prabhakar, Ming Tsai, D. Scott, Hope Tice, Linda Meincke, Jean F. Challacombe, Gary Xie, Maria Gomez, Eidelyn Gonzales, Jeremy Schmutz, Kevin Wu, Marie-Claude Krawczyk, Heather Kimball, Graham A. Mark, David C. Torney, John C. Detter, Laurie Gordon, Albert L. Williams, Susan Lucas, Len A. Pennacchio, Linda S. Thompson, Robert K. Moyzis, Kristen Kadner, Arthur Kobayashi, Larry L. Deaven, Richard D. Nandkeshwar, E.W. Campbell, Patricia L. Wills, Andrea Aerts, Joan Yang, Darryl O. Ricke, Mark Dickson, Astrid Terry, Steve Lowry, Paul Gilna, Paul G. Richardson, Thom Ludeman, Olivier Couronne, Timothy Shough, Chitra Manohar, David Bruce, Jamie Jett, Evan E. Eichler, Pieter J. deJong, Mark Mundt, Judith M. Buckingham, Robert D. Sutherland, Roxanne Tapia, Heather Blumer, Wayne Huang, Leslie Chasteen, A. Christine Munk, Sanjay Israni, Deborah L. Grady, Igor V. Grigoriev, Stacey Black, Judith D. Cohn, David F. Callen, Han C. Chi, William J. Bruno, Cliff Han, Mirian Denys, Mira Dimitrijevic-Bussod, Martin Pollard, Connie S. Campbell, Richard M. Myers, Yee Man Chan, Sam Pitluck, Sam Rash, Joseph J. Fawcett, Mari Christensen, Lauren Haydu, Frederick Lopez, Lynn M. Clark, Julio Escobar, B. Parson-Quintana, Raymond L. Stallings, Tina Leyba, Dave Flowers, Eva Bajorek, Jenna Morgan, Mary L. Campbell, Anna Ustaszewska, Donna L. Robinson, Nu Vo, Edward M. Rubin, Lynne Goodwin, Paul Predki, Uffe Hellsten, Daniel S. Rokhsar, Phillip B. Jewett, Matthew Groza, Tijana Glavina, Chenier Caoile, Alex Rodriguez, Xinwei She, David Goodstein, Jung-Rung Wu, Levy E. Ulanovsky, Asaf Salamov, Nancy Hammon, Olga Chertkov
Publikováno v:
Nature. 432(7020)
Human chromosome 16 features one of the highest levels of segmentally duplicated sequence among the human autosomes. We report here the 78,884,754 base pairs of finished chromosome 16 sequence, representing over 99.9% of its euchromatin. Manual annot
Autor:
Mary Bao Tran-Gyamfi, Ivan Ovcharenko, Trevor Hawkins, Maria Gomez, Mirian Denys, Victor V. Solovyev, Terrence S. Furey, Jamie Jett, Jeremy Schmutz, Dea Fotopulos, David Gordon, Tom Slezak, Kevin Wu, Heather Kimball, Pieter J. deJong, Catherine Medina, Vladimer Larionov, Paula McCready, Stephanine Rogers, James Retterer, John C. Detter, Diego Martinez, Richard M. Myers, Paul Predki, Stacey Black, Eva Bajorek, Chenier Caoile, Alex Rodriguez, Isaac Ho, Arthur Kobayashi, Jane Lamerdin, Xinwei She, Yunian Lou, Jane Grimwood, Kristen Kadner, Alex Copeland, Wayne Huang, Sanjay Israni, Carmen Rosa Albacete García, Gary Xie, Doug Smith, Anthony V. Carrano, Matthew Groza, Catherine A. Cleland, Matt Nolan, Paul G. Richardson, Eidelyn Gonzales, Nina Thayer, Anna Ustaszewska, Eileen Dalin, Olivier Couronne, Evan E. Eichler, Tijana Glavina, Astrid Terry, Sun-Hee Leem, Steve Lowry, Anne S. Olsen, Lucía Ramírez, Ming Tsai, Stephanie Malfatti, Hope Tice, Uffe Hellsten, David Goodstein, Martin Pollard, Daniel S. Rokhsar, Nancy Hammon, Angelica Salazar, Jenna Morgan, Yee Man Chan, Michael R. Altherr, Paramvir S. Dehal, Nu Vo, Linda K. Ashworth, Elbert Branscomb, Laurie Gordon, Julio Escobar, Anthony P. Popkie, Dave Flowers, Anca M. Georgescu, Len A. Pennacchio, Sam Pitluck, Sam Rash, Edward M. Rubin, Sean Caenepeel, Glenda Quan, Asaf Salamov, Inna Dubchak, Lisa Stubbs, Andrea Aerts, Mark Dickson, Kathryn Nelson, Mari Christensen, Lauren Haydu, Frederick Lopez, Mark C. Wagner, Jeremy Wheeler, Joan Yang, Susan Lucas
Publikováno v:
Nature. 428(6982)
Chromosome 19 has the highest gene density of all human chromosomes, more than double the genome-wide average. The large clustered gene families, corresponding high G + C content, CpG islands and density of repetitive DNA indicate a chromosome rich i
Autor:
Jeff T. Inman, Matthew A. Booker, David Stamper, C. Kodira, Jolene Schwertfeger, Nina Thayer, Donald Kiphart, Jennifer R. Wortman, Wen Huang, J. J. Zhuang, S. Root, Carol Harger, M. P. Skupski, R. Thompson, Andrew Farmer, Faye D. Schilkey, Adam Siepel, M. Harpold
During 1998 the primary focus of the Genome Sequence DataBase (GSDB; http://www.ncgr.org/gsdb ) located at the National Center for Genome Resources (NCGR) has been to improve data quality, improve data collections, and provide new methods and tools t
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::17fa34191bcafefa0097d889e2293be2
https://europepmc.org/articles/PMC148091/
https://europepmc.org/articles/PMC148091/
Autor:
John Rohrlich, Chris Fields, Gautam B. Singh, Peter A. Schad, Gifford Keen, Maria Pumilia, Marian Skupski, Rhonda Reinert, Nina Thayer, Colleen Walsh, Jolene Schwertfeger, Gary Thompson, Michael P. McLeod, Gustavo Seluja, Linda Smyth, Rajini Takkallapalli, Maurice Manning, Christopher Clark, John O'Neill, Frederick Wedgeworth, Lynn Harris, Yolanda Romero, Leandrita Flores, Andrew Farmer, David Crowley, David Stamper, Ada Espinosa-Lujan, Ethan Allen, Randy Suggs, Judy Stein, David Rider, Adam Siepel, Carol Harger, David Easley, Emily Dickinson
Publikováno v:
Nucleic acids research. 25(1)
The Genome Sequence DataBase (GSDB) has completed its conversion to an improved relational database. The new database, GSDB 1.0, is fully operational and publicly available. Data contributions, including both original sequence submissions and communi