Zobrazeno 1 - 10
of 30
pro vyhledávání: '"Nimisha Chaturvedi"'
Autor:
David A. Smith, Carlota Fernandez-Antunez, Andrea Magri, Rory Bowden, Nimisha Chaturvedi, Jacques Fellay, John McLauchlan, Graham R. Foster, William L. Irving, STOP-HCV Consortium, Peter Simmonds, Vincent Pedergnana, Santseharay Ramirez, Jens Bukh, Eleanor Barnes, M. Azim Ansari
Publikováno v:
Nature Communications, Vol 12, Iss 1, Pp 1-11 (2021)
Sofosbuvir is a common therapy in hepatitis C virus infection, which targets the NS5B polymerase. Here, Smith et al. analyze the association between whole genome HCV polymorphisms and sofosbuvir treatment failure and identify three common polymorphis
Externí odkaz:
https://doaj.org/article/fba960aa3b6a4946a4842f08d7a24e6d
Publikováno v:
BMC Bioinformatics, Vol 22, Iss 1, Pp 1-20 (2021)
Abstract Background Improvements in sequencing technology continue to drive sequencing cost towards $100 per genome. However, mapping sequenced data to a reference genome remains a computationally-intensive task due to the dependence on edit distance
Externí odkaz:
https://doaj.org/article/db6fb83f6d0344df8c0598c147a89165
Autor:
Petar Scepanovic, Cécile Alanio, Christian Hammer, Flavia Hodel, Jacob Bergstedt, Etienne Patin, Christian W. Thorball, Nimisha Chaturvedi, Bruno Charbit, Laurent Abel, Lluis Quintana-Murci, Darragh Duffy, Matthew L. Albert, Jacques Fellay, for The Milieu Intérieur Consortium
Publikováno v:
Genome Medicine, Vol 10, Iss 1, Pp 1-13 (2018)
Abstract Background Humoral immune responses to infectious agents or vaccination vary substantially among individuals, and many of the factors responsible for this variability remain to be defined. Current evidence suggests that human genetic variati
Externí odkaz:
https://doaj.org/article/de0de19676dd41478e4a740d40c32f64
Autor:
Nimisha Chaturvedi, Evguenia S Svarovskaia, Hongmei Mo, Anu O Osinusi, Diana M Brainard, G Mani Subramanian, John G McHutchison, Stefan Zeuzem, Jacques Fellay
Publikováno v:
eLife, Vol 8 (2019)
Genetic polymorphism in the interferon lambda (IFN-λ) region is associated with spontaneous clearance of hepatitis C virus (HCV) infection and response to interferon-based treatment. Here, we evaluate associations between IFN-λ polymorphism and HCV
Externí odkaz:
https://doaj.org/article/89cbeb30939249ecbe21013f4a0de48c
Autor:
Olivier Naret, Nimisha Chaturvedi, Istvan Bartha, Christian Hammer, Jacques Fellay, The Swiss HIV Cohort Study (SHCS)
Publikováno v:
Frontiers in Genetics, Vol 9 (2018)
Studies of host genetic determinants of pathogen sequence variations can identify sites of genomic conflicts, by highlighting variants that are implicated in immune response on the host side and adaptive escape on the pathogen side. However, systemat
Externí odkaz:
https://doaj.org/article/239b857dd4b34d1a9c33a6234c543380
Autor:
Veronica Popescu, Menno M Schoonheim, Adriaan Versteeg, Nimisha Chaturvedi, Marianne Jonker, Renee Xavier de Menezes, Francisca Gallindo Garre, Bernard M J Uitdehaag, Frederik Barkhof, Hugo Vrenken
Publikováno v:
PLoS ONE, Vol 11, Iss 1, p e0143942 (2016)
Studies disagree on the location of grey matter (GM) atrophy in the multiple sclerosis (MS) brain.To examine the consistency between FSL, FreeSurfer, SPM for GM atrophy measurement (for volumes, patient/control discrimination, and correlations with c
Externí odkaz:
https://doaj.org/article/155e8ca0c60c4dbfacb1719d9e9984ad
Autor:
István Bartha, Antonio Rausell, Paul J McLaren, Pejman Mohammadi, Manuel Tardaguila, Nimisha Chaturvedi, Jacques Fellay, Amalio Telenti
Publikováno v:
PLoS Computational Biology, Vol 11, Iss 12, p e1004647 (2015)
Sequencing projects have identified large numbers of rare stop-gain and frameshift variants in the human genome. As most of these are observed in the heterozygous state, they test a gene's tolerance to haploinsufficiency and dominant loss of function
Externí odkaz:
https://doaj.org/article/a87d8d9c22c14ea5b4369f6d02176572
Autor:
Nimisha Chaturvedi, Maitreyee Kundu
Publikováno v:
Tropical Plant Research. 6:133-138
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::b57a69c3e2f20366848dcd644371f3cd
https://doi.org/10.22271/tpr.2019.v6.i1.019
https://doi.org/10.22271/tpr.2019.v6.i1.019
Additional file 1. The link to the used datasets, command line to generate simulated reads, and link to repository of Accel-Align.
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::41e8cf62829d941286287c8c2e2a8969
Autor:
Luregn J. Schlapbach, Jethro Herberg, Thomas Riedel, Samira Asgari, Anita Niederer-Loher, Christian W. Thorball, Nimisha Chaturvedi, Christa Relly, Victoria J. Wright, Vanessa Sancho-Shimizu, Alessandro Borghesi, Federico Martinón-Torres, Eric Giannoni, Philipp Agyeman, Giancarlo Natalucci, Martin Stocker, Claudia E. Kuehni, Christoph Berger, Jacques Fellay, Christoph Aebi, Sara Bernhard-Stirnemann, Evangelos Bellos, Taco W. Kuijpers, Michael Levin, Lachlan J. M. Coin, Ulrich Heininger, Christian R Kahlert, Klara M. Posfay-Barbe, Johannes Trück
Publikováno v:
Clinical infectious diseases, vol. 71, no. 10, pp. e614-e623
e623
e614
Clinical Infectious Diseases, Vol. 71, No 10 (2020) pp. e614-e623
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America
Borghesi, Alessandro; Trück, Johannes; Asgari, Samira; Sancho-Shimizu, Vanessa; Agyeman, Philipp KA; Bellos, Evangelos; Giannoni, Eric; Stocker, Martin; Posfay-Barbe, Klara M; Heininger, Ulrich; Bernhard-Stirnemann, Sara; Niederer-Loher, Anita; Kahlert, Christian R; Natalucci, Giancardlo; Relly, Christa; Riedel, Thomas; Kuehni, Claudia E; Thorball, Christian W; Chaturvedi, Nimisha; Martinon-Torres, Federico; ... (2020). Whole-exome sequencing for the identification of rare variants in primary immunodeficiency genes in children with sepsis-a prospective population-based cohort study. Clinical infectious diseases, 71(10), e614-e623. The University of Chicago Press 10.1093/cid/ciaa290
e623
e614
Clinical Infectious Diseases, Vol. 71, No 10 (2020) pp. e614-e623
Clinical Infectious Diseases: An Official Publication of the Infectious Diseases Society of America
Borghesi, Alessandro; Trück, Johannes; Asgari, Samira; Sancho-Shimizu, Vanessa; Agyeman, Philipp KA; Bellos, Evangelos; Giannoni, Eric; Stocker, Martin; Posfay-Barbe, Klara M; Heininger, Ulrich; Bernhard-Stirnemann, Sara; Niederer-Loher, Anita; Kahlert, Christian R; Natalucci, Giancardlo; Relly, Christa; Riedel, Thomas; Kuehni, Claudia E; Thorball, Christian W; Chaturvedi, Nimisha; Martinon-Torres, Federico; ... (2020). Whole-exome sequencing for the identification of rare variants in primary immunodeficiency genes in children with sepsis-a prospective population-based cohort study. Clinical infectious diseases, 71(10), e614-e623. The University of Chicago Press 10.1093/cid/ciaa290
Background. The role of primary immunodeficiencies (PID) in susceptibility to sepsis remains unknown. It is unclear whether children with sepsis benefit from genetic investigations. We hypothesized that sepsis may represent the first manifestation of
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::ac2dd4ea609b001218e7d3abf6faf3fe
https://serval.unil.ch/notice/serval:BIB_D6F373E4D323
https://serval.unil.ch/notice/serval:BIB_D6F373E4D323