Zobrazeno 1 - 10
of 10
pro vyhledávání: '"Nik Putnam"'
Autor:
Steven J. Hallam, Christina M. Preston, Christa Schleper, Paul G. Richardson, Jose de la Torre, Nik Putnam, Yoh-ichi Watanabe, Edward F. DeLong, Junichi Sugahara, Konstantinos T. Konstantinidis
Publikováno v:
Proceedings of the National Academy of Sciences. 103:18296-18301
Crenarchaeota are ubiquitous and abundant microbial constituents of soils, sediments, lakes, and ocean waters. To further describe the cosmopolitan nonthermophilic Crenarchaeota , we analyzed the genome sequence of one representative, the uncultivate
Autor:
Nori Satoh, Makoto Hamaguchi, Yuji Kohara, Tadasu Sin-I, Takeshi Kawashima, Nik Putnam, Daniel S. Rokhsar, Yutaka Satou, Eiichi Shoguchi
Publikováno v:
Genome Research. 16:297-303
Ciona intestinalis is one of the most extensively studied ascidian species and is of particular phylogenetic importance for studying the molecular mechanisms underlying the origin and evolution of chordates and vertebrates (Cameron et al. 2000; Satoh
Autor:
Gustavo Glusman, Daniel S. Rokhsar, Chris Detter, Greg Elgar, Paramvir S. Dehal, Susan Lucas, Sarah Smith, Melody S. Clark, Dmitry Pruss, Sean V. Tavtigian, Jarrod Chapman, Trevor Hawkins, Byrappa Venkatesh, Paul Predki, Y. H. Tan, Elia Stupka, Isaac Ho, Shawn Hoon, Justin Powell, Holly Baden, Tania Oh, Jared C. Roach, Marie Wong, Sam Rash, Leroy Hood, Nik Putnam, Arian F.A. Smit, Cheryl Evans, Paul G. Richardson, Jer Ming Chia, Alice Tay, Norman A. Doggett, Frans Verhoef, Maarten D. Sollewijn Gelpke, Mary Barnstead, Yvonne J. K. Edwards, Samuel Aparicio, Andrey Zharkikh, Alan Christoffels, Sydney Brenner, Lee Rowen
Publikováno v:
Science. 297:1301-1310
The compact genome ofFugu rubripeshas been sequenced to over 95% coverage, and more than 80% of the assembly is in multigene-sized scaffolds. In this 365-megabase vertebrate genome, repetitive DNA accounts for less than one-sixth of the sequence, and
Autor:
Falk Warnecke, Nikos C. Kyrpides, Philip Hugenholtz, Victor Kunin, Nik Putnam, Ernest Szeto, Linda L. Blackall, Eileen Dalin, Alice C. McHardy, Jasmyn Pangilinan, Shaomei He, Katherine D. McMahon, Natalia Ivanova, Asaf Salamov, Hector Garcia Martin, Harris Shapiro, Christine Yeates, Isidore Rigoutsos, Kerrie Barry
Publikováno v:
Nature biotechnology. 24(10)
Enhanced biological phosphorus removal (EBPR) is one of the best-studied microbially mediated industrial processes because of its ecological and economic relevance. Despite this, it is not well understood at the metabolic level. Here we present a met
Autor:
Douda Bensasson, Nik Putnam, Hayes McDonald, Andrea Aerts, Jeffrey L. Boore, Asaf Salamov, Wayne Huang, Paul G. Morris, Konstantinos Krampis, Sophien Kamoun, Sucheta Tripathi, Matteo Garbelotto, Rays H. Y. Jiang, Kurt Lamour, Igor V. Grigoriev, Inna Dubchak, Brian M. Smith, Joseph E. Smith, Daniel S. Rokhsar, Paramvir S. Dehal, Kelly Ivors, Trudy A. Torto, Astrid Terry, Mónica Medina, Mark Gijzen, Brett M. Tyler, Sam Rash
The approximately 60 species of Phytophthora are all destructive pathogens, causing rots of roots, stems, leaves and fruits of a wide range of agriculturally and ornamentally important plants (1). Some species, such as P. cinnamomi, P. parasitica and
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::ce010e87de490f0778af3aeea4ed76ee
https://doi.org/10.2172/960400
https://doi.org/10.2172/960400
Autor:
Patrick Minges, Nik Putnam, Jill Gaskell, Dan Cullen, Igor V. Grigoriev, Phil Kersten, Paula Belinky, Harris Shapiro, Amber Vanden Wymelenberg, Carlos G. Dosoretz, Grzegorz Sabat, Andrea Aerts, Diego Martinez, Asaf Salamov
Publikováno v:
Fungal genetics and biology : FGB. 43(5)
The white-rot basidiomycete Phanerochaete chrysosporium employs extracellular enzymes to completely degrade the major polymers of wood: cellulose, hemicellulose, and lignin. Analysis of a total of 10,048 v2.1 gene models predicts 769 secreted protein
Autor:
Dan Cullen, Luis F. Larrondo, Maarten D. Sollewijn Gelpke, Katherine H. Huang, Jarrod Chapman, Nik Putnam, Bernard Henrissat, Preethi Ramaiya, Pedro M. Coutinho, Diego Martinez, Randy M. Berka, Daniel S. Rokhsar, Kevin G. Helfenbein, Frank W. Larimer, J. Chris Detter
Publikováno v:
Nature biotechnology. 22(6)
White rot fungi efficiently degrade lignin, a complex aromatic polymer in wood that is among the most abundant natural materials on earth. These fungi use extracellular oxidative enzymes that are also able to transform related aromatic compounds foun
Autor:
Stephen T. Chin-Bow, Masako Sano, Ian A. Meinertzhagen, Fumiko Yoshizaki, Sachiko Miura, Shungo Kano, Patrick Lemaire, Chitra Manohar, Diego Martinez, Antoinetta Spagnuolo, Akie Nakayama, Hisayo Nomoto, Fumiko Ohta, Paul G. Richardson, Kaoru Azumi, Kazuo Inaba, Sharon A. Doyle, Shinobu Haga, Lixy Yamada, Susan Lucas, Chris Detter, Maarten D. Sollewijn Gelpke, Yasunori Sasakura, Paramvir S. Dehal, Wayne Huang, Kyosuke Hino, Bernard M. Degnan, Trevor Hawkins, Michael Levine, Akane Sasaki, Daniel S. Rokhsar, Kenneth E. M. Hastings, Simona Necula, Miho Suzuki, Takeshi Kawashima, Tijana Glavina, Steve Mount, Miki Tokuoka, Satoko Nishizaka, Shuichi Wada, Jeffrey L. Boore, Isaac Ho, Pilar Francino, Isidore Rigoutsos, Masaru Nonaka, Rosaria DeSantis, Astrid Terry, Robert K. Campbell, Nik Putnam, Naoe Harafuji, Didier Y.R. Stainier, Tadasu Shin-I, Kohji Hotta, Naohito Takatori, Kazuhiro W. Makabe, David N. Keys, Yasuaki Mochizuki, David Goodstein, Jarrod Chapman, Anna Di Gregorio, Yuji Kohara, Mónica Medina, Byung In Lee, Brad Davidson, Yutaka Satou, Tomomi Morishita, Anthony W. De Tomaso, Olivier Tassy, Hiroko Hayashi, Kasumi Yagi, Masanobu Satake, Nori Satoh, Kaoru S. Imai, Margherita Branno, Norman A. Doggett, Eiichi Shoguchi, P. Douglas Hyatt, Cindy Zhang, Frank W. Larimer, Sam Rash, Kenji Kobayashi, Mari Kobayashi, Hidetoshi Saiga, Giorgio Matassi, Kazuko Oishi, Hong Gang Wang, Satoko Awazu
Publikováno v:
Science (New York, N.Y.). 298(5601)
The first chordates appear in the fossil record at the time of the Cambrian explosion, nearly 550 million years ago. The modern ascidian tadpole represents a plausible approximation to these ancestral chordates. To illuminate the origins of chordate
Autor:
Diego Martinez, Luis F Larrondo, Nik Putnam, Maarten D Sollewijn Gelpke, Katherine Huang, Jarrod Chapman, Kevin G Helfenbein, Preethi Ramaiya, J Chris Detter, Frank Larimer, Pedro M Coutinho, Bernard Henrissat, Randy Berka, Dan Cullen, Daniel Rokhsar
Publikováno v:
Nature Biotechnology. 22:899-899
Autor:
Diego Martinez, Luis F Larrondo, Nik Putnam, Maarten D Sollewijn Gelpke, Katherine Huang, Jarrod Chapman, Kevin G Helfenbein, Preethi Ramaiya, J Chris Detter, Frank Larimer, Pedro M Coutinho, Bernard Henrissat, Randy Berka, Dan Cullen, Daniel Rokhsar
Publikováno v:
Nature Biotechnology. 22:899-899