Zobrazeno 1 - 10
of 29
pro vyhledávání: '"Nicolas, Jung"'
Publikováno v:
Bioinformatics . 2021 May 5;37(5):659-668
With the emergence of high-throughput technologies, it is possible to measure large amounts of data relatively at low cost. Such situations arise in many fields from sciences to humanities, and variable selection may be of great help to answer challe
Externí odkaz:
http://arxiv.org/abs/1512.03307
Autor:
Shoichiro Kameoka, Daisuke Motooka, Satoshi Watanabe, Ryuichi Kubo, Nicolas Jung, Yuki Midorikawa, Natsuko O. Shinozaki, Yu Sawai, Aya K. Takeda, Shota Nakamura
Publikováno v:
BMC Genomics, Vol 22, Iss 1, Pp 1-10 (2021)
Abstract Background 16S rRNA gene amplicon sequencing (16S analysis) is widely used to analyze microbiota with next-generation sequencing technologies. Here, we compared fecal 16S analysis data from 192 Japanese volunteers using the modified V1–V2
Externí odkaz:
https://doaj.org/article/697f555fe7a64b65bec092205f2208d0
Autor:
Yuki Matsumoto, Takeshi Kinjo, Daisuke Motooka, Daijiro Nabeya, Nicolas Jung, Kohei Uechi, Toshihiro Horii, Tetsuya Iida, Jiro Fujita, Shota Nakamura
Publikováno v:
Emerging Microbes and Infections, Vol 8, Iss 1, Pp 1043-1053 (2019)
ABSTRACTThe prevalence of nontuberculous mycobacteria (NTM) pulmonary diseases has been increasing worldwide. NTM consist of approximately 200 species and distinguishing between them at the subspecies level is critical to treatment. In this study, we
Externí odkaz:
https://doaj.org/article/f8174441b7e843b8b0c272539951bc90
Autor:
Véronique Schenten, Sébastien Plançon, Nicolas Jung, Justine Hann, Jean-Luc Bueb, Sabrina Bréchard, Eric J. Tschirhart, Fabrice Tolle
Publikováno v:
Frontiers in Immunology, Vol 9 (2018)
S100A8 and S100A9 are members of the S100 family of cytoplasmic EF-hand Ca2+-binding proteins and are abundantly expressed in the cytosol of neutrophils. In addition to their intracellular roles, S100A8/A9 can be secreted in the extracellular environ
Externí odkaz:
https://doaj.org/article/8601fccc797b4765be118a893ef5564d
Publikováno v:
Methods in molecular biology (Clifton, N.J.). 2477
Computational approaches are the main approaches used in genome annotation. However, accuracy is low. Untranslated regions are not identified, complex isoforms are not predicted correctly and discovery rate of noncoding RNA is low. RNA-seq has revolu
Autor:
Takashi Hishida, Daisuke Motooka, Shoichiro Kameoka, Tetsuya Iida, Shota Nakamura, Mohamad Al kadi, Daisuke Okuzaki, Nicolas Jung, Shingo Ito
Publikováno v:
Functional & Integrative Genomics
Sequencing the entire RNA molecule leads to a better understanding of the transcriptome architecture. SMARTer (Switching Mechanism at 5′-End of RNA Template) is a technology aimed at generating full-length cDNA from low amounts of mRNA for sequenci
Publikováno v:
Methods in Molecular Biology ISBN: 9781071622568
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::3a857b596cbdac8ec79dbaca87345db1
https://doi.org/10.1007/978-1-0716-2257-5_6
https://doi.org/10.1007/978-1-0716-2257-5_6
Autor:
Cindy Barnig, Ghada Alsaleh, Nicolas Jung, Doulaye Dembélé, Nicodème Paul, Anh Poirot, Béatrice Uring-Lambert, Philippe Georgel, Fréderic de Blay, Seiamak Bahram
Publikováno v:
PLoS ONE, Vol 10, Iss 11, p e0141740 (2015)
Eosinophils are leukocytes that are released into the peripheral blood in a phenotypically mature state and are capable of being recruited into tissues in response to appropriate stimuli. Eosinophils, traditionally considered cytotoxic effector cells
Externí odkaz:
https://doaj.org/article/eae73dc704d34dbdb90bfc65de53b964
Autor:
Nicolas Jung, Laurent Vallat, Ismail Aouadi, Myriam Maumy-Bertrand, Seiamak Bahram, Raphael Carapito, Frédéric Bertrand
Publikováno v:
Bioinformatics
Bioinformatics, 2021, 37 (5), pp.659-668. ⟨10.1093/bioinformatics/btaa855⟩
Bioinformatics, Oxford University Press (OUP), 2021, 37 (5), pp.659-668. ⟨10.1093/bioinformatics/btaa855⟩
Bioinformatics, 2021, 37 (5), pp.659-668. ⟨10.1093/bioinformatics/btaa855⟩
Bioinformatics, Oxford University Press (OUP), 2021, 37 (5), pp.659-668. ⟨10.1093/bioinformatics/btaa855⟩
Motivation With the growth of big data, variable selection has become one of the critical challenges in statistics. Although many methods have been proposed in the literature, their performance in terms of recall (sensitivity) and precision (predicti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::60379b5e9278843f6d90aaf92047b56f
https://hal.science/hal-03206128/document
https://hal.science/hal-03206128/document
Autor:
Nicolas Jung, Yuki Matsumoto, Takumi Maruyama, Daisuke Motooka, Makiko Ito, Ying-Feng Hsu, Morito Matsuoka, Shota Nakamura
Publikováno v:
CEC
Metagenomic shotgun sequencing enables us to explore diverse DNA sequences from viruses, bacteria, and eukaryotic microbes in complex samples. As the continuous advancement of sequencing technology generates a massive amount of sequencing data, its o