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Community standards and future opportunities for synthetic communities in plant-microbiota research.

Autor: Northen TR; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA. TRNorthen@lbl.gov.; DOE Joint Genome Institute, Berkeley, CA, USA. TRNorthen@lbl.gov., Kleiner M; Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC, USA., Torres M; Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, Berkeley, CA, USA., Kovács ÁT; Institute of Biology, Leiden University, Leiden, The Netherlands.; DTU Bioengineering, Technical University of Denmark, Kongens Lyngby, Denmark., Nicolaisen MH; Department of Plant and Environmental Sciences, University of Copenhagen, Copenhagen, Denmark., Krzyżanowska DM; Intercollegiate Faculty of Biotechnology UG&MUG, University of Gdańsk, Gdańsk, Poland., Sharma S; Department of Biochemical Engineering and Biotechnology, Indian Institute of Technology Delhi, New Delhi, India., Lund G; Sustainable Soils and Crops, Rothamsted Research, Harpenden, UK., Jelsbak L; DTU Bioengineering, Technical University of Denmark, Kongens Lyngby, Denmark., Baars O; Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC, USA., Kindtler NL; Terrestrial Ecology Section, Department of Biology, University of Copenhagen, Copenhagen, Denmark., Wippel K; Swammerdam Institute for Life Sciences, University of Amsterdam, Science Park 904, Amsterdam, The Netherlands., Dinesen C; Institute of Biology, Leiden University, Leiden, The Netherlands.; DTU Bioengineering, Technical University of Denmark, Kongens Lyngby, Denmark., Ferrarezi JA; Department of Genetics, Luiz de Queiroz College of Agriculture, University of São Paulo, Piracicaba, Brazil., Marian M; Center for Agriculture Food Environment, University of Trento, San Michele all'Adige, Trento, Italy., Pioppi A; Institute of Biology, Leiden University, Leiden, The Netherlands.; DTU Bioengineering, Technical University of Denmark, Kongens Lyngby, Denmark., Xu X; Institute of Biology, Leiden University, Leiden, The Netherlands., Andersen T; Max Planck Institute for Plant Breeding Research, Cologne, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS), Düsseldorf, Germany., Geldner N; Department of Plant Molecular Biology, University of Lausanne, Lausanne, Switzerland., Schulze-Lefert P; Max Planck Institute for Plant Breeding Research, Cologne, Germany.; Cluster of Excellence on Plant Sciences (CEPLAS), Düsseldorf, Germany., Vorholt JA; Institute of Microbiology, ETH Zurich, Zurich, Switzerland., Garrido-Oter R; Max Planck Institute for Plant Breeding Research, Cologne, Germany. garridoo@mpipz.mpg.de.; Cluster of Excellence on Plant Sciences (CEPLAS), Düsseldorf, Germany. garridoo@mpipz.mpg.de.; Earlham Institute, Norwich Research Park, Norwich, UK. garridoo@mpipz.mpg.de.

Publikováno v: Nature microbiology [Nat Microbiol] 2024 Nov; Vol. 9 (11), pp. 2774-2784. Date of Electronic Publication: 2024 Oct 30.

The potential of Pseudomonas fluorescens SBW25 to produce viscosin enhances wheat root colonization and shapes root-associated microbial communities in a plant genotype-dependent manner in soil systems.

Autor: Guan Y; Department of Plant and Environmental Science, University of Copenhagen, Frederiksberg, Denmark., Bak F; Department of Plant and Environmental Science, University of Copenhagen, Frederiksberg, Denmark.; Bioresources Unit, AIT Austrian Institute of Technology, Tulln, Austria., Hennessy RC; Department of Plant and Environmental Science, University of Copenhagen, Frederiksberg, Denmark., Horn Herms C; Department of Plant and Environmental Science, University of Copenhagen, Frederiksberg, Denmark., Elberg CL; Department of Environmental Science, Aarhus University, Roskilde, Denmark., Dresbøll DB; Department of Plant and Environmental Science, University of Copenhagen, Frederiksberg, Denmark., Winding A; Department of Environmental Science, Aarhus University, Roskilde, Denmark., Sapkota R; Department of Environmental Science, Aarhus University, Roskilde, Denmark., Nicolaisen MH; Department of Plant and Environmental Science, University of Copenhagen, Frederiksberg, Denmark.

Publikováno v: MSphere [mSphere] 2024 Jul 30; Vol. 9 (7), pp. e0029424. Date of Electronic Publication: 2024 Jun 21.

Genetic rearrangements in Pseudomonas amygdali pathovar aesculi shape coronatine plasmids.

Autor: Nielsen TK; Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark., Winther-Have CS; Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark; Globe Institute, University of Copenhagen, 1350 Copenhagen, Denmark., Thomsen IM; Department of Geosciences and Natural Resource Management, University of Copenhagen, 1958 Frederiksberg C, Denmark., Jackson RW; School of Biosciences and the Birmingham Institute of Forest Research, University of Birmingham, Birmingham B15 2TT, United Kingdom., Rabiey M; School of Biosciences and the Birmingham Institute of Forest Research, University of Birmingham, Birmingham B15 2TT, United Kingdom., Hennessy RC; Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark., Bak F; Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark., Kot W; Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark., Nicolaisen MH; Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark., Carstens AB; Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark., Hansen LH; Department of Plant and Environmental Sciences, University of Copenhagen, 1871 Frederiksberg C, Denmark. Electronic address: lhha@plen.ku.dk.

Publikováno v: Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases [Infect Genet Evol] 2023 Sep; Vol. 113, pp. 105486. Date of Electronic Publication: 2023 Aug 02.