Zobrazeno 1 - 10
of 23
pro vyhledávání: '"Nicodème, Pierre"'
Autor:
Nicodeme, Pierre
Transcription factors are short stretches of DNA (or $k$-mers) mainly located in promoters sequences that enhance or repress gene expression. With respect to an initial distribution of letters on the DNA alphabet, Behrens and Vingron consider a rando
Externí odkaz:
http://arxiv.org/abs/1205.6420
We consider a component of the word statistics known as clump; starting from a finite set of words, clumps are maximal overlapping sets of these occurrences. This parameter has first been studied by Schbath with the aim of counting the number of occu
Externí odkaz:
http://arxiv.org/abs/0804.3671
Publikováno v:
In Theoretical Computer Science 2002 287(2):593-617
Autor:
Smyth, Bill1,2, Nicodème, Pierre3
Publikováno v:
Fundamenta Informaticae. Jun2003, Vol. 55 Issue 3-4, p71-88. 18p.
Autor:
Banderier, Cyril, Nicodème, Pierre
Publikováno v:
Statistical Methods for Post-Genomic Data
Statistical Methods for Post-Genomic Data, Jan 2011, Paris, France. no page numbering
Statistical Methods for Post-Genomic Data, Jan 2011, Paris, France. no page numbering
International audience; We consider i.i.d. increments (or jumps) X_i that are integers in [-c,...,+d], the partial sums S_j, and the discrete walks (j,S_j) with 1
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::fa54da6e0379bc8ec1e4fc27461a3abb
https://hal.archives-ouvertes.fr/hal-00567091/file/smpgd11.pdf
https://hal.archives-ouvertes.fr/hal-00567091/file/smpgd11.pdf
Publikováno v:
[Research Report] RR-3606, INRIA. 1999
We present a complete analysis of the statistics of number of occurrences of a regular expression pattern in a random text. This covers «motifs» widely used in computational biology. Our approach is based on: (i) a constructive approach to classica
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::e51f838090b8226ac26063debacd2574
https://inria.hal.science/inria-00073074/document
https://inria.hal.science/inria-00073074/document
Autor:
Nicodème, Pierre
Publikováno v:
[Rapport de recherche] RR-3201, INRIA. 1997
Nous décrivons le modèle probabiliste utilisé pour calibrer l'alignement local de deux séquences, quand un schéma de score additif est utilisé. Ce modèle est utilisé en particulier par le logiciel BLAST (Basic Local Alignment Search Tool), qu
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::da6702a1e994ed6498f916fec66406fe
https://inria.hal.science/inria-00073488
https://inria.hal.science/inria-00073488
Autor:
Nicodème, Pierre
Publikováno v:
[Research Report] RR-2911, INRIA. 1996
We describe a new method of processing similarity queries of a proteic multiple alignment with a set (database) of protein sequences, or similarity queries of a protein sequence with a set of protein alignments. We use a representation of multiple al
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=dedup_wf_001::8350e850123d50ae513869268215c16e
https://hal.inria.fr/inria-00073785/document
https://hal.inria.fr/inria-00073785/document
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