Zobrazeno 1 - 10
of 36
pro vyhledávání: '"Ngoi JM"'
Autor:
Kimenyi, KM, Wamae, K, Ngoi, JM, de Laurent, ZR, Ndwiga, L, Osoti, V, Obiero, G, Abdi, AI, Bejon, P, Ochola-Oyier, LI
Background High levels of genetic diversity are common characteristics of Plasmodium falciparum parasite populations in high malaria transmission regions. There has been a decline in malaria transmission intensity over 12 years of surveillance in the
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::7a4abb7a5ec79d39ee77e0b7dbcefd50
https://ora.ox.ac.uk/objects/uuid:239ae4a9-0ead-428f-9a5f-627f84d08555
https://ora.ox.ac.uk/objects/uuid:239ae4a9-0ead-428f-9a5f-627f84d08555
Autor:
Otieno, JR, Kamau, EM, Oketch, JW, Ngoi, JM, Gichuki, AM, Binter, S, Otieno, GP, Ngama, M, Agoti, CN, Cane, PA, Kellam, P, Cotten, M, Lemey, P, Nokes, DJ
This is a correction to: Virus Evolution, Volume 4, Issue 2, July 2018, vey027, https://doi.org/10.1093/ve/vey027
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od______1032::ea0e775a9ea45ce70cd75a6c671e226f
http://hdl.handle.net/10044/1/69455
http://hdl.handle.net/10044/1/69455
Autor:
Otieno, J, Kamau, E, Oketch, J, Ngoi, JM, Gichuki, A, Binter, S, Otieno, G, Ngama, M, Agoti, C, Cane, P, Kellam, P, Cotten, M, Lemey, P, Nokes, D
The respiratory syncytial virus (RSV) group A variant with the 72-nucleotide duplication in the G gene, genotype ON1, was first detected in Kilifi in 2012 and has almost completely replaced previously circulating genotype GA2 strains. This replacemen
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=od______1032::1f01adbffdd28c253a0e38ea05ce03c1
http://hdl.handle.net/10044/1/72070
http://hdl.handle.net/10044/1/72070
Autor:
Mogeni, P, Williams, TN, Omedo, I, Kimani, D, Ngoi, JM, Mwacharo, J, Morter, R, Nyundo, C, Wambua, J, Nyangweso, G, Kapulu, M, Fegan, G, Bejon, P
Publikováno v:
Journal of Infectious Diseases. 216(9)
Background: Malaria control strategies need to respond to geographical hotspots of transmission. Detection of hotspots depends on the sensitivity of the diagnostic tool used. Methods: We conducted cross-sectional surveys in three sites within Kilifi
Autor:
Amoako E; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana; Cape Coast Teaching Hospital, Cape Coast, Ghana; University of Cape Coast, School of Medical Sciences, Cape Coast, Ghana. Electronic address: ella@yemaachi.com., Amuzu S; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana., Ofori EO; Cape Coast Teaching Hospital, Cape Coast, Ghana., Akligoh HS; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana., Tackie R; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana., Ibrahim BA; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana., Quaye EK; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana., Akakpo PK; Cape Coast Teaching Hospital, Cape Coast, Ghana; University of Cape Coast, School of Medical Sciences, Cape Coast, Ghana; Pathologists without Borders, Accra, Ghana., Aniakwo LA; Cape Coast Teaching Hospital, Cape Coast, Ghana., Jimah B; Cape Coast Teaching Hospital, Cape Coast, Ghana; University of Cape Coast, School of Medical Sciences, Cape Coast, Ghana., Ulzen-Appiah K; Cape Coast Teaching Hospital, Cape Coast, Ghana; University of Cape Coast, School of Medical Sciences, Cape Coast, Ghana., Hutchful D; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana., Manu A; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana., Ngoi JM; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana., Paemka L; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana., Alhassan Y; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana; Department of Biostatistics, University of Ghana, Accra, Ghana., Obeng EA; Pathologists without Borders, Accra, Ghana., Lim N; Lucence Health Inc, Palo Alto, CA, United States., Rajah L; Lucence Health Inc, Palo Alto, CA, United States., Pek M; Lucence Health Inc, Palo Alto, CA, United States., Challis J; Lucence Health Inc, Palo Alto, CA, United States., Rahman GA; University of Cape Coast, School of Medical Sciences, Cape Coast, Ghana., Tan MH; Lucence Health Inc, Palo Alto, CA, United States., Bediako Y; Yemaachi Biotech, 222 Swaniker Street, Accra, Ghana.
Publikováno v:
Translational oncology [Transl Oncol] 2024 Aug 16; Vol. 49, pp. 102100. Date of Electronic Publication: 2024 Aug 16.
Autor:
Missa KF; Direction de la Recherche et du Développement, Centre Suisse de Recherches Scientifiques en Côte d'Ivoire, Abidjan, Côte d'Ivoire.; Laboratoire de Biologie et Santé, UFR Biosciences, Université Félix Houphouët Boigny de Cocody, Abidjan, Côte d'Ivoire., Diallo K; Direction de la Recherche et du Développement, Centre Suisse de Recherches Scientifiques en Côte d'Ivoire, Abidjan, Côte d'Ivoire.; West African Centre for Cell Biology of Infectious Pathogens, Accra, Ghana., Bla KB; Laboratoire de Biologie et Santé, UFR Biosciences, Université Félix Houphouët Boigny de Cocody, Abidjan, Côte d'Ivoire., Tuo KJ; Direction de la Recherche et du Développement, Centre Suisse de Recherches Scientifiques en Côte d'Ivoire, Abidjan, Côte d'Ivoire.; Laboratoire de Microbiologie, Biotechnologies et Bio-informatique, Institut National Polytechnique Félix Houphouët-Boigny, Yamoussoukro, Côte d'Ivoire., Gboko KDT; Direction de la Recherche et du Développement, Centre Suisse de Recherches Scientifiques en Côte d'Ivoire, Abidjan, Côte d'Ivoire., Tiémélé LS; Direction de la Recherche et du Développement, Centre Suisse de Recherches Scientifiques en Côte d'Ivoire, Abidjan, Côte d'Ivoire., Ouattara AF; Direction de la Recherche et du Développement, Centre Suisse de Recherches Scientifiques en Côte d'Ivoire, Abidjan, Côte d'Ivoire.; Laboratoire de Cytologie et Biologie Animale, Université Nangui Abrogoua, Abidjan, Côte d'Ivoire., Gragnon BG; Laboratoire de Cytologie et Biologie Animale, Université Nangui Abrogoua, Abidjan, Côte d'Ivoire., Ngoi JM; West African Centre for Cell Biology of Infectious Pathogens, Accra, Ghana., Wilkinson RJ; Laboratoire National d'Appui au Développement Agricole, Laboratoire Régional de Korhogo, Korhogo, Côte d'Ivoire.; The Francis Crick Institute, London, United Kingdom.; Department of Infectious Disease, Imperial College London, London, United Kingdom., Awandare GA; West African Centre for Cell Biology of Infectious Pathogens, Accra, Ghana., Bonfoh B; Direction de la Recherche et du Développement, Centre Suisse de Recherches Scientifiques en Côte d'Ivoire, Abidjan, Côte d'Ivoire.
Publikováno v:
Frontiers in microbiology [Front Microbiol] 2024 Jun 27; Vol. 15, pp. 1412923. Date of Electronic Publication: 2024 Jun 27 (Print Publication: 2024).
Autor:
Hunt M; European Molecular Biology Laboratory - European Bioinformatics Institute, Hinxton, UK.; Nuffield Department of Medicine, University of Oxford, Oxford, UK.; National Institute of Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Headley Way, Oxford, UK.; Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, University of Oxford, Oxford, UK., Hinrichs AS; Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA., Anderson D; European Molecular Biology Laboratory - European Bioinformatics Institute, Hinxton, UK., Karim L; Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA.; Department of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA., Dearlove BL; Institute for Hygiene and Applied Immunology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Vienna 1090, Austria., Knaggs J; European Molecular Biology Laboratory - European Bioinformatics Institute, Hinxton, UK.; Nuffield Department of Medicine, University of Oxford, Oxford, UK.; National Institute of Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Headley Way, Oxford, UK.; Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, University of Oxford, Oxford, UK., Constantinides B; Nuffield Department of Medicine, University of Oxford, Oxford, UK.; Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, University of Oxford, Oxford, UK., Fowler PW; Nuffield Department of Medicine, University of Oxford, Oxford, UK.; National Institute of Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Headley Way, Oxford, UK.; Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, University of Oxford, Oxford, UK., Rodger G; Nuffield Department of Medicine, University of Oxford, Oxford, UK.; Health Protection Research Unit in Healthcare Associated Infections and Antimicrobial Resistance, University of Oxford, Oxford, UK., Street T; Nuffield Department of Medicine, University of Oxford, Oxford, UK.; National Institute of Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Headley Way, Oxford, UK., Lumley S; Nuffield Department of Medicine, University of Oxford, Oxford, UK.; Department of Infectious Diseases and Microbiology, John Radcliffe Hospital, Oxford, UK., Webster H; Nuffield Department of Medicine, University of Oxford, Oxford, UK., Sanderson T; Francis Crick Institute, London, UK., Ruis C; Victor Phillip Dahdaleh Heart & Lung Research Institute, University of Cambridge, Cambridge, UK.; Department of Veterinary Medicine, University of Cambridge, Cambridge, UK., de Maio N; European Molecular Biology Laboratory - European Bioinformatics Institute, Hinxton, UK., Amenga-Etego LN; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra, Ghana., Amuzu DSY; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra, Ghana., Avaro M; Servicio de Virus Respiratorios, Instituto Nacional Enfermedades Infecciosas, ANLIS 'Dr. Carlos G. Malbrán', Buenos Aires, Argentina., Awandare GA; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra, Ghana., Ayivor-Djanie R; Laboratory for Medical Biotechnology and Biomanufacturing, International Centre for Genetic Engineering and Biotechnology, Tristie, Italy.; Department of Biomedical Sciences, University of Health and Allied Sciences, Ho, Ghana., Bashton M; The Hub for Biotechnology in the Built Environment, Department of Applied Sciences, Faculty of Health and Life Sciences, Northumbria University, Newcastle upon Tyne, NE1 8ST, UK., Batty EM; Centre for Tropical Medicine and Global Health, Nuffield Department of Medicine, University of Oxford, Oxford, UK.; Mahidol-Oxford Tropical Medicine Research Unit, Bangkok, Thailand., Bediako Y; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra, Ghana., De Belder D; Unidad Operativa Centro Nacional de Genómica y Bioinformática, ANLIS 'Dr. Carlos G. Malbrán', Buenos Aires, Argentina., Benedetti E; Servicio de Virus Respiratorios, Instituto Nacional Enfermedades Infecciosas, ANLIS 'Dr. Carlos G. Malbrán', Buenos Aires, Argentina., Bergthaler A; Institute for Hygiene and Applied Immunology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Vienna 1090, Austria., Boers SA; Dept. Medical Microbiology, Leiden University Medical Center, Albinusdreef 2, 2333 ZA, Leiden, The Netherlands., Campos J; Unidad Operativa Centro Nacional de Genómica y Bioinformática, ANLIS 'Dr. Carlos G. Malbrán', Buenos Aires, Argentina., Carr RAA; Department of Biomedical Sciences, University of Health and Allied Sciences, Ho, Ghana.; Department of Computational Medicine and Bioinformatics, University of Michigan, Michigan, Ann Arbor, MI, USA., Cuba F; Unidad Operativa Centro Nacional de Genómica y Bioinformática, ANLIS 'Dr. Carlos G. Malbrán', Buenos Aires, Argentina., Dattero ME; Servicio de Virus Respiratorios, Instituto Nacional Enfermedades Infecciosas, ANLIS 'Dr. Carlos G. Malbrán', Buenos Aires, Argentina., Dejnirattisai W; Division of Emerging Infectious Disease, Research Department, Faculty of Medicine Siriraj Hospital, Mahidol University, Bangkoknoi, Bangkok 10700, Thailand., Dilthey A; Institute of Medical Microbiology and Hospital Hygiene, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany., Duedu KO; Department of Biomedical Sciences, University of Health and Allied Sciences, Ho, Ghana.; College of Life Sciences, Birmingham City University, Birmingham, UK., Endler L; Institute for Hygiene and Applied Immunology, Center for Pathophysiology, Infectiology and Immunology, Medical University of Vienna, Vienna 1090, Austria., Engelmann I; Pathogenesis and Control of Chronic and Emerging Infections, Univ Montpellier, INSERM, Etablissement Français du Sang, Virology Laboratory, CHU Montpellier, Montpellier, France., Francisco NM; Grupo de Investigação Microbiana e Imunológica, Instituto Nacional de Investigação em Saúde (National Institute for Health Research), Luanda, Angola., Fuchs J; Institute of Virology, Freiburg University Medical Center, Faculty of Medicine, University of Freiburg, Freiburg, Germany., Gnimpieba EZ; Biomedical Engineering Department, University of South Dakota, Sioux Falls, SD 57107., Groc S; Virology Laboratory, CHU Montpellier, Montpellier, France., Gyamfi J; Department of Biomedical Sciences, University of Health and Allied Sciences, Ho, Ghana.; School of Health and Life Sciences, Teesside University, Middlesbrough, UK., Heemskerk D; Dept. Medical Microbiology, Leiden University Medical Center, Albinusdreef 2, 2333 ZA, Leiden, The Netherlands., Houwaart T; Institute of Medical Microbiology and Hospital Hygiene, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany., Hsiao NY; Divison of Medical Virology, University of Cape Town and National Health Laboratory Service., Huska M; Genome Competence Center (MF1), Robert Koch Institute, Nordufer 20, 13353 Berlin, Germany., Hölzer M; Genome Competence Center (MF1), Robert Koch Institute, Nordufer 20, 13353 Berlin, Germany., Iranzadeh A; Computational Biology Division, University of Cape Town., Jarva H; HUS Diagnostic Center, Clinical Microbiology, University of Helsinki and Helsinki University Hospital, Helsinki, Finland., Jeewandara C; Allergy Immunology and Cell Biology Unit, Department of Immunology and Molecular Medicine, University of Sri Jayewardenepura, Nugegoda, Sri Lanka., Jolly B; Karkinos Healthcare Private Limited (KHPL), Aurbis Business Parks, Bellandur, Bengaluru, Karnataka, 560103, India.; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, India., Joseph R; Computational Biology Division, University of Cape Town., Kant R; Department of Veterinary Biosciences, University of Helsinki, 00014 Helsinki, Finland.; Department of Virology, University of Helsinki, 00014 Helsinki, Finland.; Department of Tropical Parasitology, Institute of Maritime and Tropical Medicine, Medical University of Gdansk, 81-519 Gdynia, Poland., Ki KKK; Department of Microbiology, Singapore General Hospital, Singapore., Kurkela S; HUS Diagnostic Center, Clinical Microbiology, University of Helsinki and Helsinki University Hospital, Helsinki, Finland., Lappalainen M; HUS Diagnostic Center, Clinical Microbiology, University of Helsinki and Helsinki University Hospital, Helsinki, Finland., Lataretu M; Genome Competence Center (MF1), Robert Koch Institute, Nordufer 20, 13353 Berlin, Germany., Liu C; Chinese Academy of Medical Science (CAMS) Oxford Institute (COI), University of Oxford, Oxford, UK.; Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK., Malavige GN; Allergy Immunology and Cell Biology Unit, Department of Immunology and Molecular Medicine, University of Sri Jayewardenepura, Nugegoda, Sri Lanka., Mashe T; Health System Strengthening Unit, World Health Organisation, Harare, Zimbabwe., Mongkolsapaya J; Mahidol-Oxford Tropical Medicine Research Unit, Bangkok, Thailand.; Chinese Academy of Medical Science (CAMS) Oxford Institute (COI), University of Oxford, Oxford, UK.; Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK., Montes B; Virology Laboratory, CHU Montpellier, Montpellier, France., Molina Mora JA; Centro de investigación en Enfermedades Tropicales & Facultad de Microbiología, Universidad de Costa Rica, Costa Rica., Morang'a CM; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra, Ghana., Mvula B; Public Health Institute of Malawi, Ministry of Health, Malawi., Nagarajan N; Genome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Singapore.; Yong Loo Lin School of Medicine, National University of Singapore, Singapore., Nelson A; Department of Applied Sciences, Faculty of Health and Life Sciences, Northumbria University, Newcastle upon Tyne, NE1 8ST, UK., Ngoi JM; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra, Ghana., da Paixão JP; Grupo de Investigação Microbiana e Imunológica, Instituto Nacional de Investigação em Saúde (National Institute for Health Research), Luanda, Angola., Panning M; Institute of Virology, Freiburg University Medical Center, Faculty of Medicine, University of Freiburg, Freiburg, Germany., Poklepovich T; Unidad Operativa Centro Nacional de Genómica y Bioinformática, ANLIS 'Dr. Carlos G. Malbrán', Buenos Aires, Argentina., Quashie PK; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), University of Ghana, Accra, Ghana., Ranasinghe D; Allergy Immunology and Cell Biology Unit, Department of Immunology and Molecular Medicine, University of Sri Jayewardenepura, Nugegoda, Sri Lanka., Russo M; Servicio de Virus Respiratorios, Instituto Nacional Enfermedades Infecciosas, ANLIS 'Dr. Carlos G. Malbrán', Buenos Aires, Argentina., San JE; Duke Human Vaccine Institute, Duke University, Durham, NC 27710.; University of KwaZulu Natal, Durban, South Africa, 4001., Sanderson ND; Nuffield Department of Medicine, University of Oxford, Oxford, UK.; National Institute of Health Research Oxford Biomedical Research Centre, John Radcliffe Hospital, Headley Way, Oxford, UK., Scaria V; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad, Uttar Pradesh, India.; Vishwanath Cancer Care Foundation (VCCF), Neelkanth Business Park Kirol Village, West Mumbai, Maharashtra, 400086, India., Screaton G; Nuffield Department of Medicine, University of Oxford, Oxford, UK., Sironen T; Department of Veterinary Biosciences, University of Helsinki, 00014 Helsinki, Finland.; Department of Virology, University of Helsinki, 00014 Helsinki, Finland., Sisay A; Department of Medical Laboratory Sciences, College of Health Sciences, Addis Ababa University, P.O.Box 1176, Addis Ababa, Ethiopia., Smith D; The Hub for Biotechnology in the Built Environment, Department of Applied Sciences, Faculty of Health and Life Sciences, Northumbria University, Newcastle upon Tyne, NE1 8ST, UK., Smura T; Department of Veterinary Biosciences, University of Helsinki, 00014 Helsinki, Finland.; Department of Virology, University of Helsinki, 00014 Helsinki, Finland., Supasa P; Chinese Academy of Medical Science (CAMS) Oxford Institute (COI), University of Oxford, Oxford, UK.; Wellcome Centre for Human Genetics, Nuffield Department of Medicine, University of Oxford, Oxford, UK., Suphavilai C; Genome Institute of Singapore, Agency for Science, Technology and Research (A*STAR), Singapore., Swann J; Nuffield Department of Medicine, University of Oxford, Oxford, UK., Tegally H; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, South Africa., Tegomoh B; Centre de Coordination des Opérations d'Urgences de Santé Publique, Ministere de Sante Publique, Cameroun.; University of California, Berkeley, Berkeley, California, USA.; Nebraska Department of Health and Human Services, Lincoln, Nebraska, USA., Vapalahti O; Department of Veterinary Biosciences, University of Helsinki, 00014 Helsinki, Finland.; Department of Virology, University of Helsinki, 00014 Helsinki, Finland., Walker A; Institute of Virology, University Hospital Düsseldorf, Heinrich Heine University Düsseldorf, Düsseldorf, Germany., Wilkinson RJ; Francis Crick Institute, London, UK.; Centre for Infectious Diseases Research in Africa, University of Cape Town.; Imperial College London, UK., Williamson C; Computational Biology Division, University of Cape Town., de Oliveira T; Centre for Epidemic Response and Innovation (CERI), Stellenbosch University, South Africa.; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), University of KwaZulu-Natal, South Africa., Peto TE; Nuffield Department of Medicine, University of Oxford, Oxford, UK., Crook D; Nuffield Department of Medicine, University of Oxford, Oxford, UK., Corbett-Detig R; Genomics Institute, University of California, Santa Cruz, Santa Cruz, CA.; Department of Biomolecular Engineering, University of California, Santa Cruz, Santa Cruz, CA., Iqbal Z; European Molecular Biology Laboratory - European Bioinformatics Institute, Hinxton, UK.; Milner Centre for Evolution, University of Bath, UK.
Publikováno v:
BioRxiv : the preprint server for biology [bioRxiv] 2024 Apr 30. Date of Electronic Publication: 2024 Apr 30.
Autor:
Girgis ST; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Adika E; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana., Nenyewodey FE; Navrongo Health Research Centre (NHRC), Ghana Health Service, Navrongo, Upper East Region, Ghana., Senoo Jnr DK; Navrongo Health Research Centre (NHRC), Ghana Health Service, Navrongo, Upper East Region, Ghana., Ngoi JM; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana., Bandoh K; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana., Lorenz O; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., van de Steeg G; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Harrott AJR; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Nsoh S; Navrongo Health Research Centre (NHRC), Ghana Health Service, Navrongo, Upper East Region, Ghana., Judge K; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Pearson RD; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Almagro-Garcia J; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Saiid S; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana., Atampah S; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana., Amoako EK; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana., Morang'a CM; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana., Asoala V; Navrongo Health Research Centre (NHRC), Ghana Health Service, Navrongo, Upper East Region, Ghana., Adjei ES; Ledzokuku Krowor Municipal Assembly (LEKMA) Hospital, Accra, Ghana., Burden W; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Roberts-Sengier W; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Drury E; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Pierce ML; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Gonçalves S; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Awandare GA; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana., Kwiatkowski DP; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK., Amenga-Etego LN; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Legon, Ghana. lamenga-etego@ug.edu.gh., Hamilton WL; Wellcome Sanger Institute, Wellcome Trust Genome Campus, Hinxton, UK. wh2@sanger.ac.uk.; Department of Medicine, University of Cambridge, Cambridge, UK. wh2@sanger.ac.uk.; Cambridge University Hospitals NHS Foundation Trust, Cambridge, UK. wh2@sanger.ac.uk.
Publikováno v:
Nature microbiology [Nat Microbiol] 2023 Dec; Vol. 8 (12), pp. 2365-2377. Date of Electronic Publication: 2023 Nov 23.
Autor:
Odera DO; Centre of Infectious Diseases, Heidelberg University Hospital, Heidelberg, Germany.; Centre for Geographic Medicine Research (Coast), Kenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi, Kenya., Tuju J; Centre for Geographic Medicine Research (Coast), Kenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi, Kenya., Mwai K; Centre for Geographic Medicine Research (Coast), Kenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi, Kenya.; Epidemiology and Biostatistics Division, School of Public Health, University of the Witwatersrand, Johannesburg, South Africa., Nkumama IN; Centre of Infectious Diseases, Heidelberg University Hospital, Heidelberg, Germany., Fürle K; Centre of Infectious Diseases, Heidelberg University Hospital, Heidelberg, Germany., Chege T; Centre for Geographic Medicine Research (Coast), Kenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi, Kenya., Kimathi R; Centre for Geographic Medicine Research (Coast), Kenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi, Kenya., Diehl S; Centre of Infectious Diseases, Heidelberg University Hospital, Heidelberg, Germany., Musasia FK; Centre of Infectious Diseases, Heidelberg University Hospital, Heidelberg, Germany., Rosenkranz M; Centre of Infectious Diseases, Heidelberg University Hospital, Heidelberg, Germany., Njuguna P; Centre for Geographic Medicine Research (Coast), Kenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi, Kenya., Hamaluba M; Centre for Geographic Medicine Research (Coast), Kenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi, Kenya., Kapulu MC; Centre for Geographic Medicine Research (Coast), Kenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi, Kenya., Frank R; Centre of Infectious Diseases, Heidelberg University Hospital, Heidelberg, Germany., Osier FHA; Centre of Infectious Diseases, Heidelberg University Hospital, Heidelberg, Germany.; Centre for Geographic Medicine Research (Coast), Kenya Medical Research Institute-Wellcome Trust Research Programme, Kilifi, Kenya.; Department of Life Sciences, Imperial College London, UK., Abdi AI, Chi PC, de Laurent Z, Jao I, Kamuya D, Kamuyu G, Makale J, Murungi L, Musyoki J, Muthui M, Mwacharo J, Kariuki S, Mwanga D, Mwongeli J, Ndungu F, Njue M, Nyangweso G, Kimani D, Ngoi JM, Musembi J, Ngoto O, Otieno E, Ooko M, Shangala J, Wambua J, Mohammed KS, Omuoyo D, Mosobo M, Kibinge N, Kinyanjui S, Bejon P, Lowe B, Marsh K, Marsh V, Abebe Y, Billingsley PF, Sim BKL, Hoffman SL, James ER, Richie TL, Audi A, Olewe F, Oloo J, Ongecha J, Ongas MO, Koskei N, Bull PC, Hodgson SH, Kivisi C, Imwong M, Murphy SC, Ogutu B, Tarning J, Winterberg M, Williams TN
Publikováno v:
Science translational medicine [Sci Transl Med] 2023 Feb 08; Vol. 15 (682), pp. eabn5993. Date of Electronic Publication: 2023 Feb 08.
Autor:
Tegally H; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., San JE; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Cotten M; MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda.; MRC-University of Glasgow Centre for Virus Research, Glasgow, UK., Moir M; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa., Tegomoh B; The Biotechnology Centre of the University of Yaoundé I, Yaoundé, Cameroon.; CDC Foundation, Atlanta, Georgia, Nebraska Department of Health and Human Services, Lincoln, NE, USA., Mboowa G; Institute of Pathogen Genomics, Africa Centres for Disease Control and Prevention (Africa CDC), Addis Ababa, Ethiopia., Martin DP; Institute of Infectious Diseases and Molecular Medicine, Department of Integrative Biomedical Sciences, Computational Biology Division, University of Cape Town, Cape Town, South Africa.; Division of Medical Virology, Wellcome Centre for Infectious Diseases in Africa, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa., Baxter C; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa., Lambisia AW; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Diallo A; Institut Pasteur de Dakar, Dakar, Senegal., Amoako DG; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa.; School of Health Sciences, College of Health Sciences, University of KwaZulu-Natal, Durban, KwaZulu-Natal, South Africa., Diagne MM; Institut Pasteur de Dakar, Dakar, Senegal., Sisay A; Department of Medical Laboratory Sciences, College of Health Sciences, Addis Ababa University, Addis Ababa, Ethiopia.; Department of Microbial, Cellular and Molecular Biology, College of Natural and Computational Sciences, Addis Ababa University, Addis Ababa, Ethiopia., Zekri AN; Cancer Biology Department, Virology and Immunology Unit, National Cancer Institute, Cairo University, Cairo, Egypt., Gueye AS; World Health Organization, Africa Region, Brazzaville, Republic of the Congo., Sangare AK; Centre d'Infectiologie Charles Mérieux-Mali (CICM-Mali), Bamako, Mali., Ouedraogo AS; Bacteriology and Virology Department Souro Sanou University Hospital, Bobo-Dioulasso, Burkina Faso., Sow A; West African Health Organisation, Bobo-Dioulasso, Burkina Faso., Musa AO; Faculty of Medicine and Health Sciences, Kassala University, Kassala City, Sudan.; Department of Microbiology, Faculty of Medical Laboratory Sciences, University of Gezira, Gezira, Sudan.; General Administration of Laboratories and Blood Banks, Ministry of Health, Kassala State, Sudan., Sesay AK; MRC Unit The Gambia at LSHTM, Fajara, Gambia., Abias AG; National Public Health Laboratory, Ministry of Health, Juba, Republic of South Sudan., Elzagheid AI; Libyan Biotechnology Research Center, Tripoli, Libya., Lagare A; Center for Medical and Sanitary Research (CERMES), Niamey, Niger., Kemi AS; The Nigerian Institute of Medical Research, Yaba, Lagos, Nigeria., Abar AE; Laboratoire de la Caisse Nationale de Sécurité Sociale, Djibouti, Republic of Djibouti., Johnson AA; Department of Virology, College of Medicine, University of Ibadan, Ibadan, Nigeria.; Infectious Disease Institute, College of Medicine, University of Ibadan, Ibadan, Nigeria., Fowotade A; Medical Microbiology and Parasitology Department, College of Medicine, University of Ibadan, Ibadan, Nigeria.; Biorepository Clinical Virology Laboratory, College of Medicine, University of Ibadan, Ibadan, Nigeria., Oluwapelumi AO; Department of Medical Microbiology and Parasitology, Faculty of Basic Clinical Sciences, College of Health Sciences, University of Ilorin, Ilorin, Kwara State, Nigeria.; The Pirbright Institute, Woking, UK., Amuri AA; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo.; Université de Kinshasa (UNIKIN), Kinshasa, the Democratic Republic of the Congo., Juru A; National Microbiology Reference Laboratory, Harare, Zimbabwe., Kandeil A; Center of Scientific Excellence for Influenza Viruses, National Research Centre (NRC), Cairo, Egypt., Mostafa A; Center of Scientific Excellence for Influenza Viruses, National Research Centre (NRC), Cairo, Egypt., Rebai A; Laboratory of Molecular and Cellular Screening Processes, Centre of Biotechnology of Sfax, University of Sfax, Sfax, Tunisia., Sayed A; Genomics and Epigenomics Program, Research Department CCHE57357, Cairo, Egypt., Kazeem A; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria.; Department of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede, Osun State, Nigeria., Balde A; Laboratório de Biologia Molecular Jean Piaget, Bissau, Guinea-Bissau.; University Jean Piaget in Guinea-Bissau, Bissau, Guinea-Bissau., Christoffels A; Institute of Pathogen Genomics, Africa Centres for Disease Control and Prevention (Africa CDC), Addis Ababa, Ethiopia.; SAMRC Bioinformatics Unit, SA Bioinformatics Institute, University of the Western Cape, Cape Town, South Africa., Trotter AJ; Quadram Institute Bioscience, Norwich, UK., Campbell A; Central Public Health Reference Laboratories, Freetown, Sierra Leone., Keita AK; Centre de Recherche et de Formation en Infectiologie de Guinée (CERFIG), Université de Conakry, Conakry, Guinea.; TransVIHMI, Institut de Recherche pour le Développement, Institut National de la Santé et de la Recherche Médicale (INSERM), Montpellier University, 34090, Montpellier, France., Kone A; University Clinical Research Center (UCRC), University of Sciences, Techniques and Technology of Bamako, Bamako, Mali., Bouzid A; Laboratory of Molecular and Cellular Screening Processes, Centre of Biotechnology of Sfax, University of Sfax, Sfax, Tunisia.; Sharjah Institute for Medical Research, College of Medicine, University of Sharjah, Sharjah, United Arab Emirates., Souissi A; Laboratory of Molecular and Cellular Screening Processes, Centre of Biotechnology of Sfax, University of Sfax, Sfax, Tunisia., Agweyu A; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Naguib A; Central Public Health Laboratories (CPHL), Cairo, Egypt., Gutierrez AV; Quadram Institute Bioscience, Norwich, UK., Nkeshimana A; National Institute of Public Health, Bujumbura, Burundi., Page AJ; Quadram Institute Bioscience, Norwich, UK., Yadouleton A; Laboratoire des Fièvres Hémorragiques Virales du Benin, Cotonou, Benin., Vinze A; Infectious Disease and Microbiome Program, Broad Institute of Harvard and MIT, Cambridge, MA, USA., Happi AN; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Chouikha A; Laboratory of Clinical Virology, WHO Reference Laboratory for Poliomyelitis and Measles in the Eastern Mediterranean Region, Pasteur Institute of Tunis, University Tunis El Manar (UTM), Tunis 1002, Tunisia.; Research Laboratory 'Virus, Vectors and Hosts: One Health Apporach and Technological Innovation for a Better Health', LR20IPT02, Pasteur Institute, Tunis 1002, Tunisia., Iranzadeh A; Institute of Infectious Diseases and Molecular Medicine, Department of Integrative Biomedical Sciences, Computational Biology Division, University of Cape Town, Cape Town, South Africa.; Division of Medical Virology, Wellcome Centre for Infectious Diseases in Africa, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa., Maharaj A; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa., Batchi-Bouyou AL; Fondation Congolaise pour la Recherche Médicale, Brazzaville, Republic of the Congo.; Marien Ngouabi, Brazzaville, Republic of the Congo., Ismail A; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa., Sylverken AA; Kwame Nkrumah University of Science and Technology, Department of Theoretical and Applied Biology, Kumasi, Ghana.; Kumasi Centre for Collaborative Research in Tropical Medicine, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana., Goba A; Viral Haemorrhagic Fever Laboratory, Kenema Government Hospital, Kenema, Sierra Leone.; Ministry of Health and Sanitation, Freetown, Sierra Leone., Femi A; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria.; Department of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede, Osun State, Nigeria., Sijuwola AE; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Marycelin B; Department of Immunology, University of Maiduguri Teaching Hospital, P.M.B. 1414, Maiduguri, Nigeria.; Department of Medical Laboratory Science, College of Medical Sciences, University of Maiduguri, P.M.B. 1069, Maiduguri, Borno State, Nigeria., Salako BL; The Nigerian Institute of Medical Research, Yaba, Lagos, Nigeria.; Infectious Disease Institute, College of Medicine, University of Ibadan, Ibadan, Nigeria., Oderinde BS; Department of Immunology, University of Maiduguri Teaching Hospital, P.M.B. 1414, Maiduguri, Nigeria., Bolajoko B; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Diarra B; University Clinical Research Center (UCRC), University of Sciences, Techniques and Technology of Bamako, Bamako, Mali., Herring BL; World Health Organization, Africa Region, Brazzaville, Republic of the Congo., Tsofa B; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Lekana-Douki B; Centre Interdisciplinaires de Recherches Medicales de Franceville (CIRMF), Franceville, Gabon.; Département de Parasitologie-Mycologie Université des Sciences de la Santé (USS), Libreville, Gabon., Mvula B; National HIV Reference Laboratory, Community Health Sciences Unit, Ministry of Health, Lilongwe, Malawi., Njanpop-Lafourcade BM; World Health Organization, Africa Region, Brazzaville, Republic of the Congo., Marondera BT; African Society for Laboratory Medicine, Addis Ababa, Ethiopia., Khaireh BA; National Medical and Molecular Biology Laboratory, Ministry of Health, Djibouti, Republic of Djibouti.; Africa CDC, Rapid Responder, Team Djibouti, Djibouti, Djibouti., Kouriba B; Centre d'Infectiologie Charles Mérieux-Mali (CICM-Mali), Bamako, Mali., Adu B; Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana., Pool B; Seychelles Public Health Laboratory, Public Health Authority, Ministry of Health Seychelles, Victoria, Seychelles., McInnis B; Cancer Biology Department, Virology and Immunology Unit, National Cancer Institute, Cairo University, Cairo, Egypt., Brook C; Department of Ecology and Evolution, University of Chicago, Chicago, IL, USA.; Virology Unit, Institut Pasteur de Madagascar, Antananarivo, Madagascar., Williamson C; Division of Medical Virology, Wellcome Centre for Infectious Diseases in Africa, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa.; National Health Laboratory Service (NHLS), Cape Town, South Africa., Nduwimana C; National Institute of Public Health, Bujumbura, Burundi., Anscombe C; Malawi-Liverpool-Wellcome Trust Clinical Research Programme, Blantyre, Malawi.; Liverpool School of Tropical Medicine, Liverpool, UK., Pratt CB; University of Nebraska Medical Center (UNMC), Omaha, NE, USA., Scheepers C; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa.; SAMRC Antibody Immunity Research Unit, School of Pathology, University of the Witwatersrand, Johannesburg, South Africa., Akoua-Koffi CG; CHU de Bouaké, Laboratoire/Unité de Diagnostic des Virus des Fièvres Hémorragiques et Virus Émergents, Bouaké, Côte d'Ivoire.; UFR Sciences Médicales, Universite Alassane Ouattara, Bouaké, Côte d'Ivoire., Agoti CN; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya.; School of Public Health, Pwani University, Kilifi, Kenya., Mapanguy CM; Fondation Congolaise pour la Recherche Médicale, Brazzaville, Republic of the Congo.; Faculty of Science and Techniques, University Marien Ngouabi, Brazzaville, Republic of the Congo., Loucoubar C; Institut Pasteur de Dakar, Dakar, Senegal., Onwuamah CK; Centre for Human Virology and Genomics, Nigerian Institute of Medical Research, Yaba, Lagos, Nigeria., Ihekweazu C; Nigeria Centre for Disease Control and Prevention, Abuja, Nigeria., Malaka CN; Laboratoire des Arbovirus, Fièvres Hémorragiques virales, Virus Emergents et Zoonoses, Institut Pasteur de Bangui, Bangui, Central African Republic., Peyrefitte C; Institut Pasteur de Dakar, Dakar, Senegal., Grace C; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria.; Department of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede, Osun State, Nigeria., Omoruyi CE; Medical Microbiology and Parasitology Department, College of Medicine, University of Ibadan, Ibadan, Nigeria.; Biorepository Clinical Virology Laboratory, College of Medicine, University of Ibadan, Ibadan, Nigeria., Rafaï CD; Le Laboratoire National de Biologie Clinique et de Santé Publique (LNBCSP), Bangui, Central African Republic., Morang'a CM; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Accra, Ghana., Erameh C; Institute of Lassa Fever Research and Control, Irrua Specialist Teaching Hospital, Irrua, Nigeria., Lule DB; MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda., Bridges DJ; PATH, Lusaka, Zambia., Mukadi-Bamuleka D; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo., Park D; Infectious Disease and Microbiome Program, Broad Institute of Harvard and MIT, Cambridge, MA, USA., Rasmussen DA; Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC, USA.; Bioinformatics Research Center, North Carolina State University, Raleigh, NC, USA., Baker D; Quadram Institute Bioscience, Norwich, UK., Nokes DJ; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya.; School of Life Sciences and Zeeman Institute for Systems Biology and Infectious Disease Epidemiology Research (SBIDER), University of Warwick, Coventry, UK., Ssemwanga D; MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda.; Uganda Virus Research Institute, Entebbe, Uganda., Tshiabuila D; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Amuzu DSY; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Accra, Ghana., Goedhals D; PathCare Vermaak, Pretoria, South Africa and Division of Virology, University of the Free State, Bloemfontein, South Africa., Grant DS; Viral Haemorrhagic Fever Laboratory, Kenema Government Hospital, Kenema, Sierra Leone.; Ministry of Health and Sanitation, Freetown, Sierra Leone.; College of Medicine and Allied Health Sciences, University of Sierra Leone, Freetown, Sierra Leone., Omuoyo DO; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Maruapula D; Botswana Harvard AIDS Institute Partnership and Botswana Harvard HIV Reference Laboratory, Gaborone, Botswana., Wanjohi DW; Institute of Pathogen Genomics, Africa Centres for Disease Control and Prevention (Africa CDC), Addis Ababa, Ethiopia., Foster-Nyarko E; Quadram Institute Bioscience, Norwich, UK., Lusamaki EK; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo.; Université de Kinshasa (UNIKIN), Kinshasa, the Democratic Republic of the Congo.; TransVIHMI, Institut de Recherche pour le Développement, Institut National de la Santé et de la Recherche Médicale (INSERM), Montpellier University, 34090, Montpellier, France., Simulundu E; Macha Research Trust, Choma, Zambia., Ong'era EM; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Ngabana EN; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo.; Université de Kinshasa (UNIKIN), Kinshasa, the Democratic Republic of the Congo., Abworo EO; International Livestock Research Institute (ILRI), Nairobi, Kenya., Otieno E; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Shumba E; African Society for Laboratory Medicine, Addis Ababa, Ethiopia., Barasa E; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Ahmed EB; INRSP, Nouakchott, Mauritania.; Faculté de Médecine de Nouakchott, Nouakchott, Mauritani., Ahmed EA; Department of Microbiology, Faculty of Medical Laboratory Sciences, University of Gezira, Gezira, Sudan., Lokilo E; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo., Mukantwari E; Rwanda National Reference Laboratory, Kigali, Rwanda., Philomena E; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Belarbi E; Robert Koch-Institute, Berlin, Germany., Simon-Loriere E; G5 Evolutionary Genomics of RNA Viruses, Institut Pasteur, Paris, France., Anoh EA; CHU de Bouaké, Laboratoire/Unité de Diagnostic des Virus des Fièvres Hémorragiques et Virus Émergents, Bouaké, Côte d'Ivoire., Manuel E; Direcção Nacional da Saúde Pública, Ministério da Saúde, Luanda, Angola., Leendertz F; Robert Koch-Institute, Berlin, Germany., Taweh FM; National Public Health Reference Laboratory-National Public Health Institute of Liberia, Monrovia, Liberia., Wasfi F; Laboratory of Clinical Virology, WHO Reference Laboratory for Poliomyelitis and Measles in the Eastern Mediterranean Region, Pasteur Institute of Tunis, University Tunis El Manar (UTM), Tunis 1002, Tunisia., Abdelmoula F; Laboratory of Molecular and Cellular Screening Processes, Centre of Biotechnology of Sfax, University of Sfax, Sfax, Tunisia.; Faculty of Pharmacy of Monastir, Monastir, Tunisia., Takawira FT; National Microbiology Reference Laboratory, Harare, Zimbabwe., Derrar F; National Influenza Centre, Institut Pasteur d'Algérie, Algiers, Algeria., Ajogbasile FV; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Treurnicht F; Department of Virology, National Health Laboratory Service (NHLS), Charlotte Maxeke Johannesburg Academic Hospital, Johannesburg, South Africa.; School of Pathology, Faculty of Health Science, University of the Witwatersrand, Johannesburg, South Africa., Onikepe F; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria.; Department of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede, Osun State, Nigeria., Ntoumi F; Fondation Congolaise pour la Recherche Médicale, Brazzaville, Republic of the Congo.; Institute of Tropical Medicine, Universitätsklinikum Tübingen, Tübingen, Germany., Muyembe FM; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo.; Université de Kinshasa (UNIKIN), Kinshasa, the Democratic Republic of the Congo., Ragomzingba FEZ; Ministère de Santé Publique et de la Solidarité Nationale, Ndjamena, Chad., Dratibi FA; WHO Int Comoros, Moroni, Union of Comoros.; World Health Organization, Africa Region, Brazzaville, Republic of the Congo., Iyanu FA; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Mbunsu GK; Université de Kinshasa (UNIKIN), Kinshasa, the Democratic Republic of the Congo., Thilliez G; Quadram Institute Bioscience, Norwich, UK., Kay GL; Quadram Institute Bioscience, Norwich, UK., Akpede GO; Institute of Lassa Fever Research and Control, Irrua Specialist Teaching Hospital, Irrua, Nigeria., van Zyl GU; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, Cape Town, South Africa.; National Health Laboratory Service (NHLS), Tygerberg, Cape Town, South Africa., Awandare GA; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Accra, Ghana., Kpeli GS; UHAS COVID-19 Testing and Research Centre, University of Health and Allied Sciences, Ho, Ghana.; Department of Biomedical Sciences, University of Health and Allied Sciences, PMB 31, Ho, Ghana., Schubert G; Robert Koch-Institute, Berlin, Germany., Maphalala GP; Ministry of Health, COVID-19 Testing Laboratory, Mbabane, Kingdom of Eswatini., Ranaivoson HC; Virology Unit, Institut Pasteur de Madagascar, Antananarivo, Madagascar., Omunakwe HE; Satellite Molecular Laboratory, Rivers State University Teaching Hospital, Port Harcourt, Nigeria., Onywera H; Institute of Pathogen Genomics, Africa Centres for Disease Control and Prevention (Africa CDC), Addis Ababa, Ethiopia., Abe H; Department of Emerging Infectious Diseases, Institute of Tropical Medicine, Nagasaki University, Nagasaki, Japan., Karray H; CHU Habib Bourguiba, Laboratory of Microbiology, Faculty of Medicine of Sfax, University of Sfax, Sfax, Tunisia., Nansumba H; Central Public Health Laboratories (CPHL), Kampala, Uganda., Triki H; Laboratory of Clinical Virology, WHO Reference Laboratory for Poliomyelitis and Measles in the Eastern Mediterranean Region, Pasteur Institute of Tunis, University Tunis El Manar (UTM), Tunis 1002, Tunisia., Kadjo HAA; Institut Pasteur de Côte d'Ivoire, Departement des Virus Epidemiques, Abidjan, Côte d'Ivoire., Elgahzaly H; Faculty of Medicine Ain Shams Research Institute (MASRI), Ain Shams University, Cairo, Egypt., Gumbo H; National Microbiology Reference Laboratory, Harare, Zimbabwe., Mathieu H; Doctoral School of Technical and Environmental Sciences, Department of Biology and Human Health, N'Djamena, Chad., Kavunga-Membo H; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo., Smeti I; Laboratory of Molecular and Cellular Screening Processes, Centre of Biotechnology of Sfax, University of Sfax, Sfax, Tunisia., Olawoye IB; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Adetifa IMO; Nigeria Centre for Disease Control and Prevention, Abuja, Nigeria.; Department of Infectious Diseases Epidemiology, London School of Hygiene and Tropical Medicine, London, UK., Odia I; Institute of Lassa Fever Research and Control, Irrua Specialist Teaching Hospital, Irrua, Nigeria., Ben Boubaker IB; Charles Nicolle Hospital, Laboratory of Microbiology, National Influenza Center, Tunis, Tunisia.; University of Tunis El Manar, Faculty of Medicine of Tunis, Research Laboratory LR99ES09, Tunis, Tunisia., Muhammad IA; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Ssewanyana I; Central Public Health Laboratories (CPHL), Kampala, Uganda., Wurie I; College of Medicine and Allied Health Science, University of Sierra Leone, Freetown, Sierra Leone., Konstantinus IS; Namibia Institute of Pathology, Windhoek, Namibia., Halatoko JWA; National Institute of Hygiene, Lomé, Togo., Ayei J; National Public Health Laboratory, Ministry of Health, Juba, Republic of South Sudan., Sonoo J; Virology/Molecular Biology Department, Central Health Laboratory, Victoria Hospital, Ministry of Health and Wellness, Port Louis, Mauritius., Makangara JC; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo.; Université de Kinshasa (UNIKIN), Kinshasa, the Democratic Republic of the Congo., Tamfum JM; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo.; Université de Kinshasa (UNIKIN), Kinshasa, the Democratic Republic of the Congo., Heraud JM; Institut Pasteur de Dakar, Dakar, Senegal.; Virology Unit, Institut Pasteur de Madagascar, Antananarivo, Madagascar., Shaffer JG; Department of Biostatistics and Data Science, School of Public Health and Tropical Medicine, Tulane University, New Orleans, LA, USA., Giandhari J; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Musyoki J; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Nkurunziza J; WHO Burundi, Gitega, Burundi., Uwanibe JN; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Bhiman JN; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa.; School of Pathology, Faculty of Health Science, University of the Witwatersrand, Johannesburg, South Africa., Yasuda J; Department of Emerging Infectious Diseases, Institute of Tropical Medicine, Nagasaki University, Nagasaki, Japan., Morais J; Grupo de Investigação Microbiana e Imunológica, Instituto Nacional de Investigação em Saúde (National Institute for Health Research), Luanda, Angola.; Departamento de Bioquímica, Faculdade de Medicina, Universidade Agostinho Neto, Luanda, Angola., Kiconco J; Uganda Virus Research Institute, Entebbe, Uganda., Sandi JD; Viral Haemorrhagic Fever Laboratory, Kenema Government Hospital, Kenema, Sierra Leone.; Ministry of Health and Sanitation, Freetown, Sierra Leone., Huddleston J; Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA, USA., Odoom JK; Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana., Morobe JM; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Gyapong JO; UHAS COVID-19 Testing and Research Centre, University of Health and Allied Sciences, Ho, Ghana., Kayiwa JT; MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda., Okolie JC; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Xavier JS; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; Universidade Federal de Minas Gerais, Belo Horizonte, Brazil.; Institute of Agricultural Sciences, Universidade Federal dos Vales do Jequitinhonha e Mucuri, Unaí, Brazil., Gyamfi J; UHAS COVID-19 Testing and Research Centre, University of Health and Allied Sciences, Ho, Ghana., Wamala JF; WHO South Sudan, Juba, South Sudan., Bonney JHK; Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana., Nyandwi J; National Institute of Public Health, Bujumbura, Burundi.; Faculty of Medicine, University of Burundi, Bujumbura, Burundi., Everatt J; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa., Nakaseegu J; Uganda Virus Research Institute, Entebbe, Uganda., Ngoi JM; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Accra, Ghana., Namulondo J; Uganda Virus Research Institute, Entebbe, Uganda., Oguzie JU; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria.; Department of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede, Osun State, Nigeria., Andeko JC; Centre Interdisciplinaires de Recherches Medicales de Franceville (CIRMF), Franceville, Gabon., Lutwama JJ; MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda., Mogga JJH; WHO South Sudan, Juba, South Sudan., O'Grady J; Quadram Institute Bioscience, Norwich, UK., Siddle KJ; Infectious Disease and Microbiome Program, Broad Institute of Harvard and MIT, Cambridge, MA, USA., Victoir K; Pasteur Network, Institut Pasteur, Paris, France., Adeyemi KT; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria.; Department of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede, Osun State, Nigeria., Tumedi KA; Botswana Institute for Technology Research and Innovation, Gaborone, Botswana., Carvalho KS; Instituto Nacional de Saúde Pública, Praia, Cape Verde., Mohammed KS; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Dellagi K; Pasteur Network, Institut Pasteur, Paris, France., Musonda KG; Zambia National Public Health Institute, Lusaka, Zambia., Duedu KO; UHAS COVID-19 Testing and Research Centre, University of Health and Allied Sciences, Ho, Ghana.; Department of Biomedical Sciences, University of Health and Allied Sciences, PMB 31, Ho, Ghana., Fki-Berrajah L; CHU Habib Bourguiba, Laboratory of Microbiology, Faculty of Medicine of Sfax, University of Sfax, Sfax, Tunisia., Singh L; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Kepler LM; Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC, USA.; Bioinformatics Research Center, North Carolina State University, Raleigh, NC, USA., Biscornet L; Seychelles Public Health Laboratory, Public Health Authority, Ministry of Health Seychelles, Victoria, Seychelles., de Oliveira Martins L; Quadram Institute Bioscience, Norwich, UK., Chabuka L; Public Health Institute of Malawi, Lilongwe, Malawi., Olubayo L; Institute of Infectious Diseases and Molecular Medicine, Department of Integrative Biomedical Sciences, Computational Biology Division, University of Cape Town, Cape Town, South Africa., Ojok LD; National Public Health Laboratory, Ministry of Health, Juba, Republic of South Sudan., Deng LL; National Public Health Laboratory, Ministry of Health, Juba, Republic of South Sudan., Ochola-Oyier LI; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Tyers L; Division of Medical Virology, Wellcome Centre for Infectious Diseases in Africa, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa., Mine M; National Health Laboratory, Gaborone, Botswana., Ramuth M; Virology/Molecular Biology Department, Central Health Laboratory, Victoria Hospital, Ministry of Health and Wellness, Port Louis, Mauritius., Mastouri M; Laboratory of Transmissible Diseases and Biologically Active Substances (LR99ES27), Faculty of Pharmacy, University of Monastir, Monastir, Tunisia.; Laboratory of Microbiology, University Hospital of Monastir, Monastir, Tunisia., ElHefnawi M; Biomedical Informatics and Chemoinformatics Group, Informatics and Systems Department, National Research Centre, Cairo, Egypt., Mbanne M; Institut Pasteur de Dakar, Dakar, Senegal., Matsheka MI; Botswana Institute for Technology Research and Innovation, Gaborone, Botswana., Kebabonye M; Ministry of Health and Wellness, Gaborone, Botswana., Diop M; Institut Pasteur de Dakar, Dakar, Senegal., Momoh M; Viral Haemorrhagic Fever Laboratory, Kenema Government Hospital, Kenema, Sierra Leone.; Ministry of Health and Sanitation, Freetown, Sierra Leone.; Eastern Technical University of Sierra Leone, Kenema, Sierra Leone., Lima Mendonça MDL; Instituto Nacional de Saúde Pública, Praia, Cape Verde., Venter M; Zoonotic Arbo and Respiratory Virus Program, Centre for Viral Zoonoses, Department of Medical Virology, University of Pretoria, Pretoria, South Africa., Paye MF; Infectious Disease and Microbiome Program, Broad Institute of Harvard and MIT, Cambridge, MA, USA., Faye M; Institut Pasteur de Dakar, Dakar, Senegal., Nyaga MM; Next Generation Sequencing Unit and Division of Virology, Faculty of Health Sciences, University of the Free State, Bloemfontein, South Africa., Mareka M; National Reference Laboratory Lesotho, Maseru, Lesotho., Damaris MM; Centre for Biotechnology Research and Development, Kenya Medical Research Institute, Nairobi, Kenya., Mburu MW; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Mpina MG; Swiss Tropical and Public Health Institute, Basel, Switzerland.; Laboratorio de Investigaciones de Baney, Baney, Equatorial Guinea.; Ifakara Health Insitute, Ifakara, Tanzania., Owusu M; Department of Medical Diagnostics, Kumasi Centre for Collaborative Research in Tropical Medicine, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana., Wiley MR; University of Nebraska Medical Center (UNMC), Omaha, NE, USA.; PraesensBio, Lincoln, NE, USA., Tatfeng MY; Department of Medical Laboratory Science, Niger Delta University, Bayelsa State, Nigeria., Ayekaba MO; Laboratorio de Investigaciones de Baney, Baney, Equatorial Guinea., Abouelhoda M; Systems and Biomedical Engineering Department, Faculty of Engineering, Cairo University, Cairo, Egypt.; King Faisal Specialist Hospital and Research Center, Riyadh, Kingdom of Saudi Arabia., Beloufa MA; National Influenza Centre, Institut Pasteur d'Algérie, Algiers, Algeria., Seadawy MG; Biological Prevention Department, Ministry of Defence, Cairo, Egypt.; Faculty of Science, Fayoum University, Fayoum, Egypt., Khalifa MK; Molecular Pathology Lab, Children's Cancer Hospital, Cairo, Egypt., Matobo MM; National Reference Laboratory Lesotho, Maseru, Lesotho., Kane M; Institut Pasteur de Dakar, Dakar, Senegal., Salou M; LaboratoireBiolim FSS/Université de Lomé, Lomé, Togo., Mbulawa MB; Ministry of Health and Wellness, Gaborone, Botswana., Mwenda M; PATH, Lusaka, Zambia., Allam M; Department of Genetics and Genomics, College of Medicine and Health Sciences, United Arab Emirates University, Abu Dhabi, United Arab Emirates., Phan MVT; MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda., Abid N; Laboratory of Transmissible Diseases and Biologically Active Substances (LR99ES27), Faculty of Pharmacy, University of Monastir, Monastir, Tunisia.; High Institute of Biotechnology of Monastir, University of Monastir, Rue Taher Haddad 5000, Monastir, Tunisia., Rujeni N; Rwanda National Joint Task Force COVID-19, Rwanda Biomedical Centre, Ministry of Health, Kigali, Rwanda.; School of Health Sciences, College of Medicine and Health Sciences, University of Rwanda, Kigali, Rwanda., Abuzaid N; Department of Microbiology, Faculty of Medical Laboratory Sciences, Omdurman Islamic University, Sudan., Ismael N; Instituto Nacional de Saúde (INS), Marracuene, Mozambique., Elguindy N; Central Public Health Laboratories (CPHL), Cairo, Egypt., Top NM; Institut Pasteur de Dakar, Dakar, Senegal., Dia N; Institut Pasteur de Dakar, Dakar, Senegal., Mabunda N; Instituto Nacional de Saúde (INS), Marracuene, Mozambique., Hsiao NY; Division of Medical Virology, Wellcome Centre for Infectious Diseases in Africa, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa.; National Health Laboratory Service (NHLS), Cape Town, South Africa., Silochi NB; Laboratorio de Investigaciones de Baney, Baney, Equatorial Guinea., Francisco NM; Grupo de Investigação Microbiana e Imunológica, Instituto Nacional de Investigação em Saúde (National Institute for Health Research), Luanda, Angola., Saasa N; Department of Disease Control, School of Veterinary Medicine, University of Zambia, Lusaka, Zambia., Bbosa N; MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda., Murunga N; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Gumede N; World Health Organization, Africa Region, Brazzaville, Republic of the Congo., Wolter N; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa.; School of Pathology, Faculty of Health Science, University of the Witwatersrand, Johannesburg, South Africa., Sitharam N; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa., Ndodo N; Nigeria Centre for Disease Control and Prevention, Abuja, Nigeria., Ajayi NA; Internal Medicine Department, Alex Ekwueme Federal University Teaching Hospital, Abakaliki, Nigeria., Tordo N; Institut Pasteur de Guinée, Conarky, Guinea., Mbhele N; Division of Medical Virology, Wellcome Centre for Infectious Diseases in Africa, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa., Razanajatovo NH; Virology Unit, Institut Pasteur de Madagascar, Antananarivo, Madagascar., Iguosadolo N; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Mba N; Nigeria Centre for Disease Control and Prevention, Abuja, Nigeria., Kingsley OC; Virology Laboratory, Alex Ekwueme Federal University Teaching Hospital, Abakaliki, Nigeria., Sylvanus O; Institute of Lassa Fever Research and Control, Irrua Specialist Teaching Hospital, Irrua, Nigeria., Femi O; Department of Epidemiology and Community Health, Faculty of Clinical Sciences. College of Health Sciences. University of Ilorin, Ilorin, Kwara State, Nigeria., Adewumi OM; Department of Virology, College of Medicine, University of Ibadan, Ibadan, Nigeria.; Infectious Disease Institute, College of Medicine, University of Ibadan, Ibadan, Nigeria., Testimony O; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria.; Department of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede, Osun State, Nigeria., Ogunsanya OA; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Fakayode O; Department of Public Health, Ministry of Health, Ilorin, Kwara State, Nigeria., Ogah OE; Alex Ekwueme Federal University Teaching Hospital, Abakaliki, Nigeria., Oludayo OE; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Faye O; Institut Pasteur de Dakar, Dakar, Senegal., Smith-Lawrence P; Ministry of Health and Wellness, Gaborone, Botswana., Ondoa P; African Society for Laboratory Medicine, Addis Ababa, Ethiopia., Combe P; Mayotte Hospital Center, Mayotte, France., Nabisubi P; The African Center of Excellence in Bioinformatics and Data-Intensive Sciences, The Infectious Diseases Institute, Kampala, Uganda.; Immunology and Molecular Biology, Makerere University, Kampala, Uganda., Semanda P; Central Public Health Laboratories (CPHL), Kampala, Uganda., Oluniyi PE; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Arnaldo P; Instituto Nacional de Saúde (INS), Marracuene, Mozambique., Quashie PK; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Accra, Ghana., Okokhere PO; Institute of Lassa Fever Research and Control, Irrua Specialist Teaching Hospital, Irrua, Nigeria.; Department of Medicine, Faculty of Clinical Sciences, College of Medicine, Ambrose Alli University, Ekpoma, Edo State, Nigeria., Bejon P; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Dussart P; Virology Unit, Institut Pasteur de Madagascar, Antananarivo, Madagascar., Bester PA; Division of Virology, National Health Laboratory Service and University of the Free State, Bloemfontein, South Africa., Mbala PK; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo.; Université de Kinshasa (UNIKIN), Kinshasa, the Democratic Republic of the Congo., Kaleebu P; MRC/UVRI and LSHTM Uganda Research Unit, Entebbe, Uganda.; Uganda Virus Research Institute, Entebbe, Uganda., Abechi P; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria.; Department of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede, Osun State, Nigeria., El-Shesheny R; Center of Scientific Excellence for Influenza Viruses, National Research Centre (NRC), Cairo, Egypt.; Infectious Hazards Preparedness, World Health Organization, Eastern Mediterranean Regional Office, Cairo, Egypt., Joseph R; Division of Medical Virology, Wellcome Centre for Infectious Diseases in Africa, Institute of Infectious Disease and Molecular Medicine, University of Cape Town, Cape Town, South Africa., Aziz RK; Department of Microbiology and Immunology, Faculty of Pharmacy, Cairo University, Cairo, Egypt.; Microbiology and Immunology Research Program, Children's Cancer Hospital Egypt, Cairo, Egypt., Essomba RG; National Public Health Laboratory, Ministry of Public Health of Cameroon, Yaoundé, Cameroon.; Faculty of Medicine and Biomedical Sciences, University of Yaoundé, Yaoundé, Cameroon., Ayivor-Djanie R; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Accra, Ghana.; UHAS COVID-19 Testing and Research Centre, University of Health and Allied Sciences, Ho, Ghana.; Department of Biomedical Sciences, University of Health and Allied Sciences, PMB 31, Ho, Ghana., Njouom R; Virology Service, Centre Pasteur of Cameroun, Yaounde, Cameroon., Phillips RO; Kumasi Centre for Collaborative Research in Tropical Medicine, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana., Gorman R; Kumasi Centre for Collaborative Research in Tropical Medicine, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana., Kingsley RA; Quadram Institute Bioscience, Norwich, UK., Neto Rodrigues RMDESA; Coordenadora da rede do Diagnóstico Tuberculose/HIV/COVID-19 na Instituição - Laboratório Nacional de Referência da Tuberculose em São Tomé e Príncipe, São Tomé, São Tomé and Principe.; Ponto focal para Melhoria da qualidade dos Laboratórios (SLIPTA) ao nível de São Tomé e Príncipe, São Tomé, São Tomé and Principe., Audu RA; The Nigerian Institute of Medical Research, Yaba, Lagos, Nigeria., Carr RAA; UHAS COVID-19 Testing and Research Centre, University of Health and Allied Sciences, Ho, Ghana.; Department of Biomedical Sciences, University of Health and Allied Sciences, PMB 31, Ho, Ghana., Gargouri S; CHU Habib Bourguiba, Laboratory of Microbiology, Faculty of Medicine of Sfax, University of Sfax, Sfax, Tunisia., Masmoudi S; Laboratory of Molecular and Cellular Screening Processes, Centre of Biotechnology of Sfax, University of Sfax, Sfax, Tunisia., Bootsma S; WHO South Sudan, Juba, South Sudan., Sankhe S; Institut Pasteur de Dakar, Dakar, Senegal., Mohamed SI; National Public Health Reference Laboratory (NPHRL), Mogadishu, Somalia., Femi S; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Mhalla S; University of Tunis El Manar, Faculty of Medicine of Tunis, Research Laboratory LR99ES09, Tunis, Tunisia.; Faculty of Medicine of Monastir, University of Monastir, Monastir, Tunisia., Hosch S; Swiss Tropical and Public Health Institute, Basel, Switzerland.; University of Basel, Basel, Switzerland., Kassim SK; Faculty of Medicine Ain Shams Research Institute (MASRI), Ain Shams University, Cairo, Egypt., Metha S; Infectious Disease and Microbiome Program, Broad Institute of Harvard and MIT, Cambridge, MA, USA., Trabelsi S; Clinical and Experimental Pharmacology Lab, LR16SP02, National Center of Pharmacovigilance, University of Tunis El Manar, Tunis, Tunisia., Agwa SH; Faculty of Medicine Ain Shams Research Institute (MASRI), Ain Shams University, Cairo, Egypt., Mwangi SW; Institute of Pathogen Genomics, Africa Centres for Disease Control and Prevention (Africa CDC), Addis Ababa, Ethiopia., Doumbia S; University Clinical Research Center (UCRC), University of Sciences, Techniques and Technology of Bamako, Bamako, Mali., Makiala-Mandanda S; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo.; Université de Kinshasa (UNIKIN), Kinshasa, the Democratic Republic of the Congo., Aryeetey S; Kumasi Centre for Collaborative Research in Tropical Medicine, Kwame Nkrumah University of Science and Technology, Kumasi, Ghana., Ahmed SS; Central Public Health Laboratories (CPHL), Cairo, Egypt., Ahmed SM; INRSP, Nouakchott, Mauritania., Elhamoumi S; Infectious Disease and Microbiome Program, Broad Institute of Harvard and MIT, Cambridge, MA, USA., Moyo S; Botswana Harvard AIDS Institute Partnership and Botswana Harvard HIV Reference Laboratory, Gaborone, Botswana.; Harvard T.H. Chan School of Public Health, Boston, MA, USA., Lutucuta S; Grupo de Investigação Microbiana e Imunológica, Instituto Nacional de Investigação em Saúde (National Institute for Health Research), Luanda, Angola., Gaseitsiwe S; Botswana Harvard AIDS Institute Partnership and Botswana Harvard HIV Reference Laboratory, Gaborone, Botswana.; Harvard T.H. Chan School of Public Health, Boston, MA, USA., Jalloh S; Viral Haemorrhagic Fever Laboratory, Kenema Government Hospital, Kenema, Sierra Leone.; Ministry of Health and Sanitation, Freetown, Sierra Leone., Andriamandimby SF; Virology Unit, Institut Pasteur de Madagascar, Antananarivo, Madagascar., Oguntope S; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Grayo S; Institut Pasteur de Guinée, Conarky, Guinea., Lekana-Douki S; Centre Interdisciplinaires de Recherches Medicales de Franceville (CIRMF), Franceville, Gabon., Prosolek S; Quadram Institute Bioscience, Norwich, UK., Ouangraoua S; Centre MURAZ, Ouagadougou, Burkina Faso.; National Institute of Public Health of Burkina Faso (INSP/BF), Ouagadougou, Burkina Faso., van Wyk S; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa., Schaffner SF; Infectious Disease and Microbiome Program, Broad Institute of Harvard and MIT, Cambridge, MA, USA., Kanyerezi S; The African Center of Excellence in Bioinformatics and Data-Intensive Sciences, The Infectious Diseases Institute, Kampala, Uganda.; Immunology and Molecular Biology, Makerere University, Kampala, Uganda., Ahuka-Mundeke S; Pathogen Sequencing Lab, Institut National de Recherche Biomédicale (INRB), Kinshasa, the Democratic Republic of the Congo.; Université de Kinshasa (UNIKIN), Kinshasa, the Democratic Republic of the Congo., Rudder S; Quadram Institute Bioscience, Norwich, UK., Pillay S; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Nabadda S; Central Public Health Laboratories (CPHL), Kampala, Uganda., Behillil S; National Reference Center for Respiratory Viruses, Molecular Genetics of RNA Viruses, UMR 3569 CNRS, Université Paris Cité, Institut Pasteur, Paris, France., Budiaki SL; National Reference Laboratory Lesotho, Maseru, Lesotho., van der Werf S; National Reference Center for Respiratory Viruses, Molecular Genetics of RNA Viruses, UMR 3569 CNRS, Université Paris Cité, Institut Pasteur, Paris, France., Mashe T; National Microbiology Reference Laboratory, Harare, Zimbabwe.; World Health Organization, Harare, Zimbabwe., Mohale T; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa., Le-Viet T; Quadram Institute Bioscience, Norwich, UK., Velavan TP; Institute of Tropical Medicine, Universitätsklinikum Tübingen, Tübingen, Germany.; Vietnamese-German Center for Medical Research, Hanoi, Vietnam., Schindler T; Swiss Tropical and Public Health Institute, Basel, Switzerland.; Laboratorio de Investigaciones de Baney, Baney, Equatorial Guinea.; University of Basel, Basel, Switzerland., Maponga TG; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, Cape Town, South Africa., Bedford T; Vaccine and Infectious Disease Division, Fred Hutchinson Cancer Center, Seattle, WA, USA.; Howard Hughes Medical Institute, Fred Hutchinson Cancer Center, Seattle, WA, USA., Anyaneji UJ; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Chinedu U; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria.; Department of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede, Osun State, Nigeria., Ramphal U; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa.; Sub-Saharan African Network For TB/HIV Research Excellence (SANTHE), Durban, South Africa., George UE; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Enouf V; National Reference Center for Respiratory Viruses, Molecular Genetics of RNA Viruses, UMR 3569 CNRS, Université Paris Cité, Institut Pasteur, Paris, France., Nene V; International Livestock Research Institute (ILRI), Nairobi, Kenya., Gorova V; World Health Organization, WHO Lesotho, Maseru, Lesotho.; Med24 Medical Centre, Ruwa, Zimbabwe., Roshdy WH; Central Public Health Laboratories (CPHL), Cairo, Egypt., Karim WA; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa., Ampofo WK; Department of Virology, Noguchi Memorial Institute for Medical Research, University of Ghana, Legon, Ghana., Preiser W; Division of Medical Virology, Faculty of Medicine and Health Sciences, Stellenbosch University, Tygerberg, Cape Town, South Africa.; National Health Laboratory Service (NHLS), Tygerberg, Cape Town, South Africa., Choga WT; Botswana Harvard AIDS Institute Partnership and Botswana Harvard HIV Reference Laboratory, Gaborone, Botswana.; Division of Human Genetics, Department of Pathology, University of Cape Town, Cape Town, South Africa., Ahmed YA; World Health Organization, Africa Region, Brazzaville, Republic of the Congo., Ramphal Y; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa., Bediako Y; West African Centre for Cell Biology of Infectious Pathogens (WACCBIP), College of Basic and Applied Sciences, University of Ghana, Accra, Ghana.; Yemaachi Biotech, Accra, Ghana., Naidoo Y; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Butera Y; Rwanda National Joint Task Force COVID-19, Rwanda Biomedical Centre, Ministry of Health, Kigali, Rwanda.; Center for Human Genetics, College of Medicine and Health Sciences, University of Rwanda, Kigali, Rwanda.; Laboratory of Human Genetics, GIGA Research Institute, Liège, Belgium., de Laurent ZR; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya., Ouma AEO; Institute of Pathogen Genomics, Africa Centres for Disease Control and Prevention (Africa CDC), Addis Ababa, Ethiopia., von Gottberg A; National Institute for Communicable Diseases (NICD) of the National Health Laboratory Service (NHLS), Johannesburg, South Africa.; School of Pathology, Faculty of Health Science, University of the Witwatersrand, Johannesburg, South Africa., Githinji G; KEMRI-Wellcome Trust Research Programme, Kilifi, Kenya.; Department of Biochemistry and Biotechnology, Pwani University, Kilifi, Kenya., Moeti M; World Health Organization, Africa Region, Brazzaville, Republic of the Congo., Tomori O; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria., Sabeti PC; Infectious Disease and Microbiome Program, Broad Institute of Harvard and MIT, Cambridge, MA, USA., Sall AA; Institut Pasteur de Dakar, Dakar, Senegal., Oyola SO; International Livestock Research Institute (ILRI), Nairobi, Kenya., Tebeje YK; Institute of Pathogen Genomics, Africa Centres for Disease Control and Prevention (Africa CDC), Addis Ababa, Ethiopia., Tessema SK; Institute of Pathogen Genomics, Africa Centres for Disease Control and Prevention (Africa CDC), Addis Ababa, Ethiopia., de Oliveira T; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa.; Centre for the AIDS Programme of Research in South Africa (CAPRISA), Durban, South Africa.; Department of Global Health, University of Washington, Seattle, WA, USA., Happi C; African Centre of Excellence for Genomics of Infectious Diseases (ACEGID), Redeemer's University, Ede, Osun State, Nigeria.; Department of Biological Sciences, Faculty of Natural Sciences, Redeemer's University, Ede, Osun State, Nigeria., Lessells R; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa., Nkengasong J; Institute of Pathogen Genomics, Africa Centres for Disease Control and Prevention (Africa CDC), Addis Ababa, Ethiopia., Wilkinson E; Centre for Epidemic Response and Innovation (CERI), School of Data Science and Computational Thinking, Stellenbosch University, Stellenbosch, South Africa.; KwaZulu-Natal Research Innovation and Sequencing Platform (KRISP), Nelson R Mandela School of Medicine, University of KwaZulu-Natal, Durban, South Africa.
Publikováno v:
Science (New York, N.Y.) [Science] 2022 Oct 07; Vol. 378 (6615), pp. eabq5358. Date of Electronic Publication: 2022 Oct 07.