Zobrazeno 1 - 10
of 11
pro vyhledávání: '"Nele Nijs"'
Autor:
Eva Hulstaert, Anneleen Decock, Annelien Morlion, Celine Everaert, Kimberly Verniers, Justine Nuytens, Nele Nijs, Gary P. Schroth, Scott Kuersten, Stephen M. Gross, Pieter Mestdagh, Jo Vandesompele
Publikováno v:
STAR Protocols, Vol 2, Iss 2, Pp 100475- (2021)
Summary: Comprehensive transcriptome analysis of extracellular RNA (exRNA) purified from human biofluids is challenging because of the low RNA concentration and compromised RNA integrity. Here, we describe an optimized workflow to (1) isolate exRNA f
Externí odkaz:
https://doaj.org/article/7bfd217891a641cf956cdf736c0d0699
Autor:
Eric James de Bony, Aidan P. Tay, Justine Nuytens, Steve Lefever, Tim De Meyer, Marieke Vromman, Pieter Mestdagh, Tine Goovaerts, Nandan P. Deshpande, Stephen M. Gross, Katleen De Preter, Lucia Lorenzi, Jo Vandesompele, Nele Nijs, Pieter-Jan Volders, Jørgen Kjems, Scott Kuersten, Pavel Sumazin, Francisco Avila Cobos, Wim Trypsteen, Jasper Anckaert, Katrien Vanderheyden, Govardhan Anande, Marc R. Wilkins, Ken R. Bracke, Ting-Wen Chen, Robrecht Cannoodt, Tom Taghon, Yvan Saeys, Thomas B. Hansen, Fien Gysens, Hua-Sheng Chiu, Jan Koster, Karim Vermaelen, Gary P. Schroth, Ashwin Unnikrishnan
Publikováno v:
Lorenzi, L, Chiu, H S, Avila Cobos, F, Gross, S, Volders, P J, Cannoodt, R, Nuytens, J, Vanderheyden, K, Anckaert, J, Lefever, S, Tay, A P, de Bony, E J, Trypsteen, W, Gysens, F, Vromman, M, Goovaerts, T, Hansen, T B, Kuersten, S, Nijs, N, Taghon, T, Vermaelen, K, Bracke, K R, Saeys, Y, De Meyer, T, Deshpande, N P, Anande, G, Chen, T W, Wilkins, M R, Unnikrishnan, A, De Preter, K, Kjems, J, Koster, J, Schroth, G P, Vandesompele, J, Sumazin, P & Mestdagh, P 2021, ' The RNA Atlas expands the catalog of human non-coding RNAs ', Nature Biotechnology, vol. 39, no. 11, pp. 1453-1465 . https://doi.org/10.1038/s41587-021-00936-1
Nature biotechnology, 39(11), 1453-1465. Nature Publishing Group
Nature biotechnology, 39(11), 1453-1465. Nature Publishing Group
Existing compendia of non-coding RNA (ncRNA) are incomplete, in part because they are derived almost exclusively from small and polyadenylated RNAs. Here we present a more comprehensive atlas of the human transcriptome, which includes small and polyA
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::c28c0dc79d11cbb4d61d9ccee5d6f076
Autor:
Bert Dhondt, Gary P. Schroth, Celine Everaert, Avila Cobos F, Jasper Anckaert, Nurten Yigit, Jill Deleu, Eva Hulstaert, Van Maerken T, Vanden Eynde E, Piofczyk T, Scott Kuersten, Annelien Morlion, De Wever O, Anneleen Decock, De Wilde J, Kathleen Schoofs, Pieter Mestdagh, Kimberly Verniers, Thibaut D’huyvetter, An Hendrix, Justine Nuytens, Philippron A, Hetty Helsmoortel, Jo Vandesompele, Van Paemel R, Nele Nijs, Carolina Fierro
The use of blood-based extracellular RNA (cell-free RNA; exRNA) as clinical biomarker requires the implementation of a validated procedure for sample collection, processing, and profiling. So far, no study has systematically addressed the pre-analyti
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_________::33c22152e1f08a0a56865339c2c14a4c
https://doi.org/10.1101/2021.05.11.442610
https://doi.org/10.1101/2021.05.11.442610
Autor:
Justine Nuytens, Scott Kuersten, Celine Everaert, Gary P. Schroth, Eva Hulstaert, Annelien Morlion, Nele Nijs, Stephen M. Gross, Anneleen Decock, Pieter Mestdagh, Kimberly Verniers, Jo Vandesompele
Publikováno v:
STAR PROTOCOLS
STAR Protocols, Vol 2, Iss 2, Pp 100475-(2021)
STAR Protocols
STAR Protocols, Vol 2, Iss 2, Pp 100475-(2021)
STAR Protocols
Summary Comprehensive transcriptome analysis of extracellular RNA (exRNA) purified from human biofluids is challenging because of the low RNA concentration and compromised RNA integrity. Here, we describe an optimized workflow to (1) isolate exRNA fr
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::da538fc138e1ea4390c86a04d8d864ab
https://biblio.ugent.be/publication/8740894
https://biblio.ugent.be/publication/8740894
Autor:
Jan Koster, Tom Taghon, Yvan Saeys, Katleen De Preter, Pieter Mestdagh, Pieter-Jan Volders, Karim Vermaelen, Tim De Meyer, Stephen M. Gross, Marieke Vromman, Pavel Sumazin, Hua-Sheng Chiu, Ken R. Bracke, Steve Lefever, Thomas B. Hansen, Fien Gysens, Aidan P. Tay, Jasper Anckaert, Eric James de Bony, Ting-Wen Chen, Katrien Vanderheyden, Marc R. Wilkins, Jørgen Kjems, Tine Goovaerts, Francisco Avila Cobos, Wim Trypsteen, Robrecht Cannoodt, Scott Kuersten, Justine Nuytens, Nandan P. Deshpande, Jo Vandesompele, Nele Nijs, Govardhan Anande, Ashwin Unnikrishnan, Gary P. Schroth, Lucia Lorenzi
Publikováno v:
Nature Biotechnology. 39:1467-1467
Autor:
Lieven Clement, Els Goetghebeur, Bart K. M. Jacobs, Nancy H. C. Roosens, Nele Nijs, Jo Vandesompele, Anneleen Beckers, Ariane De Ganck, Nina Papazova
Publikováno v:
Analytical Chemistry. 89:4461-4467
Standard data analysis pipelines for digital PCR estimate the concentration of a target nucleic acid by digitizing the end-point fluorescence of the parallel micro-PCR reactions, using an automated hard threshold. While it is known that misclassifica
Autor:
Francisco Avila Cobos, Jo Vandesompele, Jan Koster, Scott Kuersten, Hua-Sheng Chiu, Robrecht Cannoodt, Ashwin Unnikrishnan, Pavel Sumazin, Justine Nuytens, Marc R. Wilkins, Gary P. Schroth, Katrien Vanderheyden, Thomas B. Hansen, Jasper Anckaert, Steve Lefever, Tom Taghon, Yvan Saeys, Nandan P. Deshpande, Lucia Lorenzi, Jørgen Kjems, Stephen M. Gross, Pieter Mestdagh, Govardhan Anande, Tim De Meyer, Nele Nijs, Tine Goovaerts, Ken R. Bracke, Katleen De Preter, Ting-Wen Chen, Pieter-Jan Volders, Karim Vermaelen
Publikováno v:
bioRxiv
The human transcriptome consists of various RNA biotypes including multiple types of non-coding RNAs (ncRNAs). Current ncRNA compendia remain incomplete partially because they are almost exclusively derived from the interrogation of small- and polyad
Externí odkaz:
https://explore.openaire.eu/search/publication?articleId=doi_dedup___::1eaeb6aacad2ff11458522ade2563d0b
Autor:
Jasper Anckaert, Pieter Mestdagh, Ruben Van Paemel, Kimberly Verniers, Joeri Tulkens, Bert Dhondt, Nele Nijs, An Hendrix, Celine Everaert, Anneleen Decock, Eva Hulstaert, Jo Vandesompele, Justine Nuytens, Hetty Helsmoortel
Publikováno v:
Clinical Cancer Research. 26:B51-B51
RNA profiling has emerged as a powerful tool to investigate the biomarker potential of human biofluids. Despite the interest in extracellular nucleic acids, RNA sequencing methods to quantify the total RNA content outside cells are rare. Therefore, w
Autor:
Francisco Avila Cobos, Jill Deleu, Ruben Van Paemel, Jasper Anckaert, Justine Nuytens, An Hendrix, Kathleen Schoofs, Nurten Yigit, Olivier De Wever, Eveline Vanden Eynde, Hetty Helsmoortel, Celine Everaert, Eva Hulstaert, Jo Vandesompele, Annelien Morlion, Annouck Philippron, Gary P. Schroth, Scott Kuersten, Bert Dhondt, Anneleen Decock, Pieter Mestdagh, Nele Nijs, Kimberly Verniers, Carolina Fierro
Publikováno v:
Clinical Cancer Research. 26:B49-B49
Cancer biomarker studies require procedures that provide accurate and precise test results with high analytical sensitivity. Consequently, the growing use of extracellular RNA from human biofluids as clinically relevant biomarker requires the impleme
Publikováno v:
Journal of Clinical Nursing. 18:1258-1266
Aims. To determine the incidence of pressure ulcers occurring at least 48 hours after admission and risk factors for pressure ulcers grade 2–4 in a long-stay surgical Intensive Care Unit (ICU) population. Background. The incidence of pressure ulcer