Zobrazeno 1 - 10
of 234
pro vyhledávání: '"Neil, Boonham"'
Autor:
Dimitrios Petsopoulos, Jordan P. Cuff, James R. Bell, James J. N. Kitson, Larissa Collins, Neil Boonham, Ramiro Morales‐Hojas, Darren M. Evans
Publikováno v:
Environmental DNA, Vol 6, Iss 3, Pp n/a-n/a (2024)
Abstract Insect populations are declining in many parts of the world, but a lack of long‐term monitoring data is impeding our ability to understand and mitigate the causes of insect biodiversity loss. Whilst high‐throughput sequencing (HTS) appro
Externí odkaz:
https://doaj.org/article/f19ae0b5f33944a5bfc88379da9c2cd4
Publikováno v:
PLoS ONE, Vol 19, Iss 3, p e0298834 (2024)
Current tools for estimating the substitution distance between two related sequences struggle to remain accurate at a high divergence. Difficulties at distant homologies, such as false seeding and over-alignment, create a high barrier for the develop
Externí odkaz:
https://doaj.org/article/78b6d1aa228d4fd880a263057483b08b
Autor:
Annelies Haegeman, Yoika Foucart, Kris De Jonghe, Thomas Goedefroit, Maher Al Rwahnih, Neil Boonham, Thierry Candresse, Yahya Z. A. Gaafar, Oscar P. Hurtado-Gonzales, Zala Kogej Zwitter, Denis Kutnjak, Janja Lamovšek, Marie Lefebvre, Martha Malapi, Irena Mavrič Pleško, Serkan Önder, Jean-Sébastien Reynard, Ferran Salavert Pamblanco, Olivier Schumpp, Kristian Stevens, Chandan Pal, Lucie Tamisier, Çiğdem Ulubaş Serçe, Inge van Duivenbode, David W. Waite, Xiaojun Hu, Heiko Ziebell, Sébastien Massart
Publikováno v:
Plants, Vol 13, Iss 5, p 623 (2024)
In the original publication [...]
Externí odkaz:
https://doaj.org/article/d24c4021863f42d798b4dd24db79400c
Autor:
Nuria Fontdevila Pareta, Maryam Khalili, Ayoub Maachi, Mark Paul S. Rivarez, Johan Rollin, Ferran Salavert, Coline Temple, Miguel A. Aranda, Neil Boonham, Marleen Botermans, Thierry Candresse, Adrian Fox, Yolanda Hernando, Denis Kutnjak, Armelle Marais, Françoise Petter, Maja Ravnikar, Ilhem Selmi, Rachid Tahzima, Charlotte Trontin, Thierry Wetzel, Sebastien Massart
Publikováno v:
Frontiers in Microbiology, Vol 14 (2023)
The advances in high-throughput sequencing (HTS) technologies and bioinformatic tools have provided new opportunities for virus and viroid discovery and diagnostics. Hence, new sequences of viral origin are being discovered and published at a previou
Externí odkaz:
https://doaj.org/article/69d046e6b4f74176802592481812b0b3
Autor:
Yaiza Gutierrez Vazquez, Ian P. Adams, Sam McGreig, John Walshaw, Femke van den Berg, Roy Sanderson, Hollie Pufal, Chris Conyers, David Langton, Ruth Broadhead, Catherine Harrison, Neil Boonham
Publikováno v:
Frontiers in Agronomy, Vol 4 (2022)
Zymoseptoria tritici is the causal agent of Septoria tritici blotch, the most important disease affecting wheat crops and responsible for up to 50% loss in yield. Azoles and SDHIs are the main groups of fungicides used to control the disease. The eff
Externí odkaz:
https://doaj.org/article/79b686a0dcd942ab8c63f8f9699c1c20
Autor:
Annelies Haegeman, Yoika Foucart, Kris De Jonghe, Thomas Goedefroit, Maher Al Rwahnih, Neil Boonham, Thierry Candresse, Yahya Z. A. Gaafar, Oscar P. Hurtado-Gonzales, Zala Kogej Zwitter, Denis Kutnjak, Janja Lamovšek, Marie Lefebvre, Martha Malapi, Irena Mavrič Pleško, Serkan Önder, Jean-Sébastien Reynard, Ferran Salavert Pamblanco, Olivier Schumpp, Kristian Stevens, Chandan Pal, Lucie Tamisier, Çiğdem Ulubaş Serçe, Inge van Duivenbode, David W. Waite, Xiaojun Hu, Heiko Ziebell, Sébastien Massart
Publikováno v:
Plants, Vol 12, Iss 11, p 2139 (2023)
High-throughput sequencing (HTS), more specifically RNA sequencing of plant tissues, has become an indispensable tool for plant virologists to detect and identify plant viruses. During the data analysis step, plant virologists typically compare the o
Externí odkaz:
https://doaj.org/article/40030533daaa4723a56319bd0debfd81
Autor:
Anja Pecman, Ian Adams, Ion Gutiérrez-Aguirre, Adrian Fox, Neil Boonham, Maja Ravnikar, Denis Kutnjak
Publikováno v:
Frontiers in Microbiology, Vol 13 (2022)
High-throughput sequencing (HTS) has become an important tool for plant virus detection and discovery. Nanopore sequencing has been rapidly developing in the recent years and offers new possibilities for fast diagnostic applications of HTS. With this
Externí odkaz:
https://doaj.org/article/bbf8c1e59ffb46f7ad062d8dc1d38df9
Autor:
Lynsey R. Harper, Lori Lawson Handley, Christoph Hahn, Neil Boonham, Helen C. Rees, Erin Lewis, Ian P. Adams, Peter Brotherton, Susanna Phillips, Bernd Hänfling
Publikováno v:
Environmental DNA, Vol 2, Iss 2, Pp 184-199 (2020)
Abstract Background Environmental DNA (eDNA) metabarcoding is revolutionizing biodiversity monitoring, but has unrealized potential for ecological hypothesis generation and testing. Aims Here, we validate this potential in a large‐scale analysis of
Externí odkaz:
https://doaj.org/article/e2f16743b2704ff0b9c5e288c5c1c1b2
Autor:
Joel Torra, José María Montull, Andreu Taberner, Nawaporn Onkokesung, Neil Boonham, Robert Edwards
Publikováno v:
Frontiers in Plant Science, Vol 12 (2021)
Lolium rigidum is one the worst herbicide resistant (HR) weeds worldwide due to its proneness to evolve multiple and cross resistance to several sites of action (SoA). In winter cereals crops in Spain, resistance to acetolactate synthase (ALS)- and a
Externí odkaz:
https://doaj.org/article/c2df685a07e64ccb91c15dd715324ceb
Autor:
Filipe de Jesus Colwell, Jock Souter, Glenn J. Bryan, Lindsey J. Compton, Neil Boonham, Ankush Prashar
Publikováno v:
Frontiers in Plant Science, Vol 12 (2021)
Traditional phenotyping techniques have long been a bottleneck in breeding programs and genotype- phenotype association studies in potato, as these methods are labor-intensive and time consuming. In addition, depending on the trait measured and metri
Externí odkaz:
https://doaj.org/article/d39db3f8139d425dbc07cdae5370028f